RNA–Protein interactions for RNA: ENST00000523628.5

HDAC2-216, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-216ENST00000523628 WASF2Q9Y6W5 498 aa8.13□□□□□ -1.11
HDAC2-216ENST00000523628 EIF4G1Q04637 1599 aaKnown RBP8.13□□□□□ -1.11
HDAC2-216ENST00000523628 DIXDC1Q155Q3 683 aa8.12□□□□□ -1.11
HDAC2-216ENST00000523628 BAP1Q92560 729 aa8.12□□□□□ -1.11
HDAC2-216ENST00000523628 TBC1D2Q9BYX2 928 aa8.12□□□□□ -1.11
HDAC2-216ENST00000523628 LINC01559Q495D7 138 aa8.11□□□□□ -1.11
HDAC2-216ENST00000523628 TERTO14746 1132 aaKnown RBP8.1□□□□□ -1.11
HDAC2-216ENST00000523628 CAPN5O15484 640 aaPredicted RBP8.1□□□□□ -1.11
HDAC2-216ENST00000523628 WIPF1O43516 503 aa8.1□□□□□ -1.11
HDAC2-216ENST00000523628 RSBN1LQ6PCB5 846 aaPredicted RBP8.1□□□□□ -1.11
HDAC2-216ENST00000523628 PARP9Q8IXQ6 854 aa8.1□□□□□ -1.11
HDAC2-216ENST00000523628 CC2D2AQ9P2K1 1620 aa8.1□□□□□ -1.11
HDAC2-216ENST00000523628 TRIM66O15016 1216 aa8.09□□□□□ -1.11
HDAC2-216ENST00000523628 ZNF511Q8NB15 262 aa8.09□□□□□ -1.11
HDAC2-216ENST00000523628 PCDHB15Q9Y5E8 787 aa8.09□□□□□ -1.11
HDAC2-216ENST00000523628 CECR2Q9BXF3 1484 aa8.08□□□□□ -1.12
HDAC2-216ENST00000523628 SPTLC1O15269 473 aa8.08□□□□□ -1.12
HDAC2-216ENST00000523628 VARSP26640 1264 aaKnown RBP8.08□□□□□ -1.12
HDAC2-216ENST00000523628 LYPD8Q6UX82 237 aa8.08□□□□□ -1.12
HDAC2-216ENST00000523628 TRIM46Q7Z4K8 759 aa8.08□□□□□ -1.12
HDAC2-216ENST00000523628 MPNDQ8N594 471 aa8.08□□□□□ -1.12
HDAC2-216ENST00000523628 AK7Q96M32 723 aa8.08□□□□□ -1.12
HDAC2-216ENST00000523628 GPBP1L1Q9HC44 474 aaPredicted RBP8.08□□□□□ -1.12
HDAC2-216ENST00000523628 TLL2Q9Y6L7 1015 aa8.08□□□□□ -1.12
HDAC2-216ENST00000523628 PLEKHG3A1L390 1219 aa8.07□□□□□ -1.12
HDAC2-216ENST00000523628 CFAP99D6REC4 459 aa8.06□□□□□ -1.12
HDAC2-216ENST00000523628 BMP1P13497 986 aa8.06□□□□□ -1.12
HDAC2-216ENST00000523628 HRCP23327 699 aa8.06□□□□□ -1.12
HDAC2-216ENST00000523628 CTHP32929 405 aa8.06□□□□□ -1.12
HDAC2-216ENST00000523628 INSM1Q01101 510 aaPredicted RBP8.06□□□□□ -1.12
HDAC2-216ENST00000523628 LCE2CQ5TA81 110 aa8.06□□□□□ -1.12
HDAC2-216ENST00000523628 ZBTB3Q9H5J0 574 aa8.06□□□□□ -1.12
HDAC2-216ENST00000523628 PRPF38BQ5VTL8 546 aaKnown RBP8.05□□□□□ -1.12
HDAC2-216ENST00000523628 RIC3Q7Z5B4 369 aa8.05□□□□□ -1.12
HDAC2-216ENST00000523628 NNTQ13423 1086 aa8.04□□□□□ -1.12
HDAC2-216ENST00000523628 NEUROD2Q15784 382 aa8.04□□□□□ -1.12
HDAC2-216ENST00000523628 F12P00748 615 aaPredicted RBP8.03□□□□□ -1.12
HDAC2-216ENST00000523628 PDE4DQ08499 809 aa8.03□□□□□ -1.12
HDAC2-216ENST00000523628 NXF1Q9UBU9 619 aaKnown RBP8.03□□□□□ -1.12
HDAC2-216ENST00000523628 STK17AQ9UEE5 414 aa8.03□□□□□ -1.12
HDAC2-216ENST00000523628 FAM174AQ8TBP5 190 aa8.02□□□□□ -1.13
HDAC2-216ENST00000523628 CABLES1Q8TDN4 633 aa8.02□□□□□ -1.13
HDAC2-216ENST00000523628 SLC16A10Q8TF71 515 aa8.02□□□□□ -1.13
HDAC2-216ENST00000523628 CSPP1Q1MSJ5 1256 aa8.01□□□□□ -1.13
HDAC2-216ENST00000523628 FOXJ1Q92949 421 aa8.01□□□□□ -1.13
HDAC2-216ENST00000523628 ZFP42Q96MM3 310 aa8.01□□□□□ -1.13
HDAC2-216ENST00000523628 MAP10Q9P2G4 905 aa8.01□□□□□ -1.13
HDAC2-216ENST00000523628 ADH1CP00326 375 aa8□□□□□ -1.13
HDAC2-216ENST00000523628 TIMP2P16035 220 aa8□□□□□ -1.13
HDAC2-216ENST00000523628 TMEM132AQ24JP5 1023 aa8□□□□□ -1.13
HDAC2-216ENST00000523628 TUSC1Q2TAM9 212 aa8□□□□□ -1.13
HDAC2-216ENST00000523628 NPAS3Q8IXF0 933 aa8□□□□□ -1.13
HDAC2-216ENST00000523628 CDK15Q96Q40 435 aa8□□□□□ -1.13
HDAC2-216ENST00000523628 WDR4P57081 412 aaKnown RBP7.99□□□□□ -1.13
HDAC2-216ENST00000523628 MYSM1Q5VVJ2 828 aa7.99□□□□□ -1.13
HDAC2-216ENST00000523628 MRPL14Q6P1L8 145 aaKnown RBP7.99□□□□□ -1.13
HDAC2-216ENST00000523628 KDM4CQ9H3R0 1056 aa7.99□□□□□ -1.13
HDAC2-216ENST00000523628 LIMD1Q9UGP4 676 aa7.99□□□□□ -1.13
HDAC2-216ENST00000523628 PER1O15534 1290 aaPredicted RBP7.98□□□□□ -1.13
HDAC2-216ENST00000523628 KLF16Q9BXK1 252 aaPredicted RBP7.98□□□□□ -1.13
HDAC2-216ENST00000523628 SMARCA2P51531 1590 aa7.97□□□□□ -1.13
HDAC2-216ENST00000523628 NUTM2BA6NNL0 878 aaPredicted RBP7.97□□□□□ -1.13
HDAC2-216ENST00000523628 NUTM2EB1AL46 878 aaPredicted RBP7.97□□□□□ -1.13
HDAC2-216ENST00000523628 LILRB3O75022 631 aa7.97□□□□□ -1.13
HDAC2-216ENST00000523628 SCARF1Q14162 830 aa7.97□□□□□ -1.13
HDAC2-216ENST00000523628 ARID5BQ14865 1188 aa7.97□□□□□ -1.13
HDAC2-216ENST00000523628 NUTM2DQ5VT03 806 aaPredicted RBP7.97□□□□□ -1.13
HDAC2-216ENST00000523628 NUTM2AQ8IVF1 878 aaPredicted RBP7.97□□□□□ -1.13
HDAC2-216ENST00000523628 TSC1Q92574 1164 aa7.97□□□□□ -1.13
HDAC2-216ENST00000523628 IRF7Q92985 503 aa7.97□□□□□ -1.13
HDAC2-216ENST00000523628 AGERQ15109 404 aa7.96□□□□□ -1.14
HDAC2-216ENST00000523628 QPCTQ16769 361 aa7.96□□□□□ -1.14
HDAC2-216ENST00000523628 C4orf48Q5BLP8 95 aa7.96□□□□□ -1.14
HDAC2-216ENST00000523628 BPHLQ86WA6 291 aaPredicted RBP7.96□□□□□ -1.14
HDAC2-216ENST00000523628 PURBQ96QR8 312 aaKnown RBP7.96□□□□□ -1.14
HDAC2-216ENST00000523628 H3BM21 787 aa7.95□□□□□ -1.14
HDAC2-216ENST00000523628 VEGFBP49765 207 aa7.95□□□□□ -1.14
HDAC2-216ENST00000523628 NR5A1Q13285 461 aa7.95□□□□□ -1.14
HDAC2-216ENST00000523628 ARMC2Q8NEN0 867 aa7.95□□□□□ -1.14
HDAC2-216ENST00000523628 FAM117AQ9C073 453 aa7.95□□□□□ -1.14
HDAC2-216ENST00000523628 HMGXB3Q12766 1538 aa7.94□□□□□ -1.14
HDAC2-216ENST00000523628 BAZ1AQ9NRL2 1556 aaPredicted RBP7.94□□□□□ -1.14
HDAC2-216ENST00000523628 ZIC2O95409 532 aaPredicted RBP7.94□□□□□ -1.14
HDAC2-216ENST00000523628 GMPRP36959 345 aa7.94□□□□□ -1.14
HDAC2-216ENST00000523628 IL27Q8NEV9 243 aa7.94□□□□□ -1.14
HDAC2-216ENST00000523628 NCAPD3P42695 1498 aa7.94□□□□□ -1.14
HDAC2-216ENST00000523628 GRM5P41594 1212 aa7.93□□□□□ -1.14
HDAC2-216ENST00000523628 RTL5Q5HYW3 569 aaPredicted RBP7.93□□□□□ -1.14
HDAC2-216ENST00000523628 SH3RF1Q7Z6J0 888 aa7.93□□□□□ -1.14
HDAC2-216ENST00000523628 ITPKCQ96DU7 683 aa7.93□□□□□ -1.14
HDAC2-216ENST00000523628 NR3C2P08235 984 aa7.92□□□□□ -1.14
HDAC2-216ENST00000523628 CLK2P49760 499 aaKnown RBP7.92□□□□□ -1.14
HDAC2-216ENST00000523628 HELBQ8NG08 1087 aaPredicted RBP7.92□□□□□ -1.14
HDAC2-216ENST00000523628 C1QTNF2Q9BXJ5 285 aa7.92□□□□□ -1.14
HDAC2-216ENST00000523628 ZFAND3Q9H8U3 227 aa7.92□□□□□ -1.14
HDAC2-216ENST00000523628 NBPF14Q5TI25 921 aa7.91□□□□□ -1.14
HDAC2-216ENST00000523628 GTF3C3Q9Y5Q9 886 aa7.91□□□□□ -1.14
HDAC2-216ENST00000523628 PEG3Q9GZU2 1588 aa7.9□□□□□ -1.14
HDAC2-216ENST00000523628 ERBB4Q15303 1308 aa7.9□□□□□ -1.14
HDAC2-216ENST00000523628 FAM181BA6NEQ2 426 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms