RNA–Protein interactions for RNA: ENST00000523543.1

CDK16-221, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-221ENST00000523543 PSME1Q06323 249 aa15.38■□□□□ 0.05
CDK16-221ENST00000523543 KRT28Q7Z3Y7 464 aa15.38■□□□□ 0.05
CDK16-221ENST00000523543 TTC21AQ8NDW8 1320 aa15.38■□□□□ 0.05
CDK16-221ENST00000523543 NPC1L1Q9UHC9 1359 aa15.37■□□□□ 0.05
CDK16-221ENST00000523543 AMER1Q5JTC6 1135 aaPredicted RBP15.37■□□□□ 0.05
CDK16-221ENST00000523543 KNSTRNQ9Y448 316 aa15.37■□□□□ 0.05
CDK16-221ENST00000523543 CGNL1Q0VF96 1302 aa15.37■□□□□ 0.05
CDK16-221ENST00000523543 XPCQ01831 940 aaPredicted RBP15.36■□□□□ 0.05
CDK16-221ENST00000523543 TRPM3Q9HCF6 1732 aaPredicted RBP15.36■□□□□ 0.05
CDK16-221ENST00000523543 NSD2O96028 1365 aa15.36■□□□□ 0.05
CDK16-221ENST00000523543 TNS3Q68CZ2 1445 aa15.34■□□□□ 0.05
CDK16-221ENST00000523543 FYB1O15117 783 aa15.34■□□□□ 0.05
CDK16-221ENST00000523543 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.34■□□□□ 0.05
CDK16-221ENST00000523543 SPATA31A3Q5VYP0 1347 aa15.34■□□□□ 0.05
CDK16-221ENST00000523543 SCAF1Q9H7N4 1312 aaKnown RBP15.34■□□□□ 0.05
CDK16-221ENST00000523543 USP31Q70CQ4 1352 aa15.33■□□□□ 0.04
CDK16-221ENST00000523543 OVOS2A0A0J9YW53 1432 aa15.33■□□□□ 0.04
CDK16-221ENST00000523543 OVOS2Q6IE36 1432 aa15.33■□□□□ 0.04
CDK16-221ENST00000523543 NME9Q86XW9 330 aa15.32■□□□□ 0.04
CDK16-221ENST00000523543 COL16A1Q07092 1604 aaPredicted RBP15.32■□□□□ 0.04
CDK16-221ENST00000523543 PAK3O75914 559 aaPredicted RBP15.31■□□□□ 0.04
CDK16-221ENST00000523543 ARHGEF10O15013 1369 aa15.31■□□□□ 0.04
CDK16-221ENST00000523543 PIK3C2AO00443 1686 aa15.31■□□□□ 0.04
CDK16-221ENST00000523543 ALS2Q96Q42 1657 aa15.31■□□□□ 0.04
CDK16-221ENST00000523543 GGNBP2Q9H3C7 697 aa15.3■□□□□ 0.04
CDK16-221ENST00000523543 USP54Q70EL1 1684 aa15.29■□□□□ 0.04
CDK16-221ENST00000523543 USP19O94966 1318 aa15.29■□□□□ 0.04
CDK16-221ENST00000523543 ABTB2Q8N961 1025 aa15.29■□□□□ 0.04
CDK16-221ENST00000523543 LRRC59Q96AG4 307 aaKnown RBP15.29■□□□□ 0.04
CDK16-221ENST00000523543 MED1Q15648 1581 aaPredicted RBP15.28■□□□□ 0.04
CDK16-221ENST00000523543 PARD3Q8TEW0 1356 aa15.28■□□□□ 0.04
CDK16-221ENST00000523543 CC2D1BQ5T0F9 858 aaKnown RBP15.28■□□□□ 0.04
CDK16-221ENST00000523543 DIEXFQ68CQ4 756 aaKnown RBP15.28■□□□□ 0.04
CDK16-221ENST00000523543 ZRANB1Q9UGI0 708 aa15.28■□□□□ 0.04
CDK16-221ENST00000523543 PHLPP1O60346 1717 aa15.27■□□□□ 0.04
CDK16-221ENST00000523543 NLRP6P59044 892 aa15.27■□□□□ 0.04
CDK16-221ENST00000523543 COG3Q96JB2 828 aa15.27■□□□□ 0.04
CDK16-221ENST00000523543 KIF20BQ96Q89 1820 aa15.27■□□□□ 0.03
CDK16-221ENST00000523543 PNPLA6Q8IY17 1366 aa15.26■□□□□ 0.03
CDK16-221ENST00000523543 NLRP13Q86W25 1043 aa15.26■□□□□ 0.03
CDK16-221ENST00000523543 FBXO41Q8TF61 875 aa15.26■□□□□ 0.03
CDK16-221ENST00000523543 HSPA1LP34931 641 aa15.25■□□□□ 0.03
CDK16-221ENST00000523543 RALBP1Q15311 655 aa15.25■□□□□ 0.03
CDK16-221ENST00000523543 NUTM2GQ5VZR2 741 aa15.25■□□□□ 0.03
CDK16-221ENST00000523543 LMOD2Q6P5Q4 547 aa15.25■□□□□ 0.03
CDK16-221ENST00000523543 MORC1Q86VD1 984 aa15.25■□□□□ 0.03
CDK16-221ENST00000523543 PRKRIP1Q9H875 184 aaPredicted RBP15.25■□□□□ 0.03
CDK16-221ENST00000523543 SLIT3O75094 1523 aa15.25■□□□□ 0.03
CDK16-221ENST00000523543 ANKRD26Q9UPS8 1709 aa15.24■□□□□ 0.03
CDK16-221ENST00000523543 MARF1Q9Y4F3 1742 aaKnown RBP15.24■□□□□ 0.03
CDK16-221ENST00000523543 AATKQ6ZMQ8 1374 aa15.24■□□□□ 0.03
CDK16-221ENST00000523543 COL22A1Q8NFW1 1626 aaPredicted RBP15.23■□□□□ 0.03
CDK16-221ENST00000523543 JCADQ9P266 1359 aa15.23■□□□□ 0.03
CDK16-221ENST00000523543 NFAT5O94916 1531 aa15.22■□□□□ 0.03
CDK16-221ENST00000523543 ANP32CO43423 234 aa15.22■□□□□ 0.03
CDK16-221ENST00000523543 GCP02774 474 aa15.21■□□□□ 0.03
CDK16-221ENST00000523543 CNGB1Q14028 1251 aaPredicted RBP15.21■□□□□ 0.03
CDK16-221ENST00000523543 CRYBG1Q9Y4K1 1723 aa15.2■□□□□ 0.02
CDK16-221ENST00000523543 KCNH5Q8NCM2 988 aa15.2■□□□□ 0.02
CDK16-221ENST00000523543 SHPRHQ149N8 1683 aa15.19■□□□□ 0.02
CDK16-221ENST00000523543 SMG6Q86US8 1419 aaKnown RBP15.19■□□□□ 0.02
CDK16-221ENST00000523543 PHRF1Q9P1Y6 1649 aaKnown RBP15.19■□□□□ 0.02
CDK16-221ENST00000523543 CABLES1Q8TDN4 633 aa15.19■□□□□ 0.02
CDK16-221ENST00000523543 MYBBP1AQ9BQG0 1328 aaKnown RBP15.18■□□□□ 0.02
CDK16-221ENST00000523543 PPP2R1AP30153 589 aa15.18■□□□□ 0.02
CDK16-221ENST00000523543 TNNT2P45379 298 aaPredicted RBP15.18■□□□□ 0.02
CDK16-221ENST00000523543 CPDO75976 1380 aa15.18■□□□□ 0.02
CDK16-221ENST00000523543 FBLN1P23142 703 aa15.17■□□□□ 0.02
CDK16-221ENST00000523543 ARHGEF25Q86VW2 580 aa15.17■□□□□ 0.02
CDK16-221ENST00000523543 POLKQ9UBT6 870 aa15.17■□□□□ 0.02
CDK16-221ENST00000523543 ABCA3Q99758 1704 aa15.17■□□□□ 0.02
CDK16-221ENST00000523543 MAP3K19Q56UN5 1328 aa15.17■□□□□ 0.02
CDK16-221ENST00000523543 SPATA31A6Q5VVP1 1343 aa15.17■□□□□ 0.02
CDK16-221ENST00000523543 KIF24Q5T7B8 1368 aa15.16■□□□□ 0.02
CDK16-221ENST00000523543 SOX12O15370 315 aa15.16■□□□□ 0.02
CDK16-221ENST00000523543 RTL1A6NKG5 1358 aa15.15■□□□□ 0.02
CDK16-221ENST00000523543 RRS1Q15050 365 aaKnown RBP15.15■□□□□ 0.02
CDK16-221ENST00000523543 CDK12Q9NYV4 1490 aaPredicted RBP15.14■□□□□ 0.01
CDK16-221ENST00000523543 KIAA0232Q92628 1395 aa15.14■□□□□ 0.01
CDK16-221ENST00000523543 PLEKHG5O94827 1062 aa15.14■□□□□ 0.01
CDK16-221ENST00000523543 EMILIN1Q9Y6C2 1016 aa15.14■□□□□ 0.01
CDK16-221ENST00000523543 INSRP06213 1382 aa15.13■□□□□ 0.01
CDK16-221ENST00000523543 ABCC6O95255 1503 aa15.13■□□□□ 0.01
CDK16-221ENST00000523543 MTHFSP49914 203 aa15.13■□□□□ 0.01
CDK16-221ENST00000523543 FLT4P35916 1363 aa15.12■□□□□ 0.01
CDK16-221ENST00000523543 HAP1P54257 671 aaPredicted RBP15.12■□□□□ 0.01
CDK16-221ENST00000523543 ZC3H6P61129 1189 aaKnown RBP15.12■□□□□ 0.01
CDK16-221ENST00000523543 MIER1Q8N108 512 aa15.12■□□□□ 0.01
CDK16-221ENST00000523543 LRP6O75581 1613 aa15.11■□□□□ 0.01
CDK16-221ENST00000523543 IP6K1Q92551 441 aa15.11■□□□□ 0.01
CDK16-221ENST00000523543 PEAK1Q9H792 1746 aa15.11■□□□□ 0.01
CDK16-221ENST00000523543 COL3A1P02461 1466 aaPredicted RBP15.1■□□□□ 0.01
CDK16-221ENST00000523543 HOXC9P31274 260 aa15.1■□□□□ 0.01
CDK16-221ENST00000523543 AMPHP49418 695 aa15.1■□□□□ 0.01
CDK16-221ENST00000523543 PRDM11Q9NQV5 511 aa15.1■□□□□ 0.01
CDK16-221ENST00000523543 BLMP54132 1417 aaPredicted RBP15.09■□□□□ 0.01
CDK16-221ENST00000523543 NUTM2BA6NNL0 878 aaPredicted RBP15.09■□□□□ 0.01
CDK16-221ENST00000523543 NUTM2EB1AL46 878 aaPredicted RBP15.09■□□□□ 0.01
CDK16-221ENST00000523543 CCER2I3L3R5 266 aa15.09■□□□□ 0.01
CDK16-221ENST00000523543 NUTM2AQ8IVF1 878 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms