RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 RIC3Q7Z5B4 369 aa10.15□□□□□ -0.78
SKP1-211ENST00000523359 EHBP1Q8NDI1 1231 aa10.15□□□□□ -0.78
SKP1-211ENST00000523359 HPS1Q92902 700 aa10.15□□□□□ -0.78
SKP1-211ENST00000523359 GMPR2Q9P2T1 348 aaKnown RBP10.15□□□□□ -0.78
SKP1-211ENST00000523359 LIMD1Q9UGP4 676 aa10.15□□□□□ -0.78
SKP1-211ENST00000523359 CFAP99D6REC4 459 aa10.14□□□□□ -0.79
SKP1-211ENST00000523359 ALDH1A1P00352 501 aa10.14□□□□□ -0.79
SKP1-211ENST00000523359 HRCP23327 699 aa10.14□□□□□ -0.79
SKP1-211ENST00000523359 SH3BP2P78314 561 aa10.14□□□□□ -0.79
SKP1-211ENST00000523359 KCNH2Q12809 1159 aa10.14□□□□□ -0.79
SKP1-211ENST00000523359 LINC01559Q495D7 138 aa10.14□□□□□ -0.79
SKP1-211ENST00000523359 DESI1Q6ICB0 168 aa10.14□□□□□ -0.79
SKP1-211ENST00000523359 CABLES1Q8TDN4 633 aa10.14□□□□□ -0.79
SKP1-211ENST00000523359 ZBTB3Q9H5J0 574 aa10.13□□□□□ -0.79
SKP1-211ENST00000523359 C14orf37Q86TY3 774 aa10.12□□□□□ -0.79
SKP1-211ENST00000523359 BAP1Q92560 729 aa10.12□□□□□ -0.79
SKP1-211ENST00000523359 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.12□□□□□ -0.79
SKP1-211ENST00000523359 CTHP32929 405 aa10.11□□□□□ -0.79
SKP1-211ENST00000523359 C11orf95C9JLR9 678 aaPredicted RBP10.1□□□□□ -0.79
SKP1-211ENST00000523359 SIAH2O43255 324 aa10.1□□□□□ -0.79
SKP1-211ENST00000523359 LYPD8Q6UX82 237 aa10.1□□□□□ -0.79
SKP1-211ENST00000523359 PRPF38BQ5VTL8 546 aaKnown RBP10.09□□□□□ -0.79
SKP1-211ENST00000523359 ATP13A2Q9NQ11 1180 aa10.09□□□□□ -0.79
SKP1-211ENST00000523359 QPCTQ16769 361 aa10.08□□□□□ -0.8
SKP1-211ENST00000523359 FBXO31Q5XUX0 539 aaPredicted RBP10.08□□□□□ -0.8
SKP1-211ENST00000523359 ZNF511Q8NB15 262 aa10.08□□□□□ -0.8
SKP1-211ENST00000523359 TSC1Q92574 1164 aa10.08□□□□□ -0.8
SKP1-211ENST00000523359 NUTM2BA6NNL0 878 aaPredicted RBP10.07□□□□□ -0.8
SKP1-211ENST00000523359 NUTM2EB1AL46 878 aaPredicted RBP10.07□□□□□ -0.8
SKP1-211ENST00000523359 TUSC1Q2TAM9 212 aa10.07□□□□□ -0.8
SKP1-211ENST00000523359 NUTM2DQ5VT03 806 aaPredicted RBP10.07□□□□□ -0.8
SKP1-211ENST00000523359 ERICH6Q7L0X2 663 aa10.07□□□□□ -0.8
SKP1-211ENST00000523359 NUTM2AQ8IVF1 878 aaPredicted RBP10.07□□□□□ -0.8
SKP1-211ENST00000523359 MAP10Q9P2G4 905 aa10.07□□□□□ -0.8
SKP1-211ENST00000523359 TLL2Q9Y6L7 1015 aa10.07□□□□□ -0.8
SKP1-211ENST00000523359 WASF2Q9Y6W5 498 aa10.07□□□□□ -0.8
SKP1-211ENST00000523359 PER1O15534 1290 aaPredicted RBP10.06□□□□□ -0.8
SKP1-211ENST00000523359 F12P00748 615 aaPredicted RBP10.04□□□□□ -0.8
SKP1-211ENST00000523359 RFC5P40937 340 aa10.04□□□□□ -0.8
SKP1-211ENST00000523359 LILRB3O75022 631 aa10.03□□□□□ -0.8
SKP1-211ENST00000523359 PPP2R2DQ66LE6 453 aa10.03□□□□□ -0.8
SKP1-211ENST00000523359 SNRPBP14678 240 aaKnown RBP10.02□□□□□ -0.81
SKP1-211ENST00000523359 VARSP26640 1264 aaKnown RBP10.02□□□□□ -0.81
SKP1-211ENST00000523359 FLIIQ13045 1269 aa10.01□□□□□ -0.81
SKP1-211ENST00000523359 RTL5Q5HYW3 569 aaPredicted RBP10.01□□□□□ -0.81
SKP1-211ENST00000523359 FOXJ1Q92949 421 aa10.01□□□□□ -0.81
SKP1-211ENST00000523359 BMP1P13497 986 aa10□□□□□ -0.81
SKP1-211ENST00000523359 TRIM47Q96LD4 638 aa10□□□□□ -0.81
SKP1-211ENST00000523359 SENP2Q9HC62 589 aa10□□□□□ -0.81
SKP1-211ENST00000523359 CAPN5O15484 640 aaPredicted RBP9.99□□□□□ -0.81
SKP1-211ENST00000523359 TREML4Q6UXN2 200 aa9.99□□□□□ -0.81
SKP1-211ENST00000523359 NNTQ13423 1086 aa9.98□□□□□ -0.81
SKP1-211ENST00000523359 HELBQ8NG08 1087 aaPredicted RBP9.98□□□□□ -0.81
SKP1-211ENST00000523359 MCM6Q14566 821 aa9.97□□□□□ -0.81
SKP1-211ENST00000523359 AGERQ15109 404 aa9.97□□□□□ -0.81
SKP1-211ENST00000523359 FAM174AQ8TBP5 190 aa9.97□□□□□ -0.81
SKP1-211ENST00000523359 ARID5BQ14865 1188 aa9.96□□□□□ -0.82
SKP1-211ENST00000523359 TMEM259Q4ZIN3 620 aa9.96□□□□□ -0.82
SKP1-211ENST00000523359 LCE2AQ5TA79 106 aaPredicted RBP9.96□□□□□ -0.82
SKP1-211ENST00000523359 TRIM46Q7Z4K8 759 aa9.96□□□□□ -0.82
SKP1-211ENST00000523359 KIFC2Q96AC6 838 aa9.96□□□□□ -0.82
SKP1-211ENST00000523359 AP1G2O75843 785 aa9.95□□□□□ -0.82
SKP1-211ENST00000523359 C4orf48Q5BLP8 95 aa9.95□□□□□ -0.82
SKP1-211ENST00000523359 MPNDQ8N594 471 aa9.95□□□□□ -0.82
SKP1-211ENST00000523359 BANK1Q8NDB2 785 aa9.94□□□□□ -0.82
SKP1-211ENST00000523359 SNRKQ9NRH2 765 aa9.94□□□□□ -0.82
SKP1-211ENST00000523359 WFS1O76024 890 aa9.93□□□□□ -0.82
SKP1-211ENST00000523359 ADH1CP00326 375 aa9.93□□□□□ -0.82
SKP1-211ENST00000523359 BPHLQ86WA6 291 aaPredicted RBP9.93□□□□□ -0.82
SKP1-211ENST00000523359 ZMYND15Q9H091 742 aa9.93□□□□□ -0.82
SKP1-211ENST00000523359 WDR4P57081 412 aaKnown RBP9.92□□□□□ -0.82
SKP1-211ENST00000523359 CTDSPL2Q05D32 466 aa9.92□□□□□ -0.82
SKP1-211ENST00000523359 NFX1Q12986 1120 aaKnown RBP9.92□□□□□ -0.82
SKP1-211ENST00000523359 USP17L8P0C7I0 530 aa9.91□□□□□ -0.82
SKP1-211ENST00000523359 UBTFP17480 764 aaKnown RBP9.91□□□□□ -0.82
SKP1-211ENST00000523359 ARMC2Q8NEN0 867 aa9.91□□□□□ -0.82
SKP1-211ENST00000523359 CDK15Q96Q40 435 aa9.91□□□□□ -0.82
SKP1-211ENST00000523359 TIMP2P16035 220 aa9.9□□□□□ -0.82
SKP1-211ENST00000523359 NBPF14Q5TI25 921 aa9.9□□□□□ -0.82
SKP1-211ENST00000523359 MAGEB6P1A0A0J9YX57 407 aa9.89□□□□□ -0.83
SKP1-211ENST00000523359 CLUAP1Q96AJ1 413 aa9.89□□□□□ -0.83
SKP1-211ENST00000523359 TERTO14746 1132 aaKnown RBP9.88□□□□□ -0.83
SKP1-211ENST00000523359 NR3C2P08235 984 aa9.88□□□□□ -0.83
SKP1-211ENST00000523359 SH3RF1Q7Z6J0 888 aa9.88□□□□□ -0.83
SKP1-211ENST00000523359 MTMR14Q8NCE2 650 aa9.88□□□□□ -0.83
SKP1-211ENST00000523359 LRRN4Q8WUT4 740 aa9.88□□□□□ -0.83
SKP1-211ENST00000523359 ZFP42Q96MM3 310 aa9.88□□□□□ -0.83
SKP1-211ENST00000523359 KLF16Q9BXK1 252 aaPredicted RBP9.88□□□□□ -0.83
SKP1-211ENST00000523359 GRM5P41594 1212 aa9.87□□□□□ -0.83
SKP1-211ENST00000523359 SH3BP5LQ7L8J4 393 aa9.87□□□□□ -0.83
SKP1-211ENST00000523359 ZFAND3Q9H8U3 227 aa9.87□□□□□ -0.83
SKP1-211ENST00000523359 MRPL14Q6P1L8 145 aaKnown RBP9.86□□□□□ -0.83
SKP1-211ENST00000523359 ITPKCQ96DU7 683 aa9.86□□□□□ -0.83
SKP1-211ENST00000523359 POM121Q96HA1 1249 aa9.86□□□□□ -0.83
SKP1-211ENST00000523359 C1QTNF2Q9BXJ5 285 aa9.86□□□□□ -0.83
SKP1-211ENST00000523359 CARD14Q9BXL6 1004 aa9.86□□□□□ -0.83
SKP1-211ENST00000523359 SUPT5HO00267 1087 aaKnown RBP9.85□□□□□ -0.83
SKP1-211ENST00000523359 ZIC2O95409 532 aaPredicted RBP9.85□□□□□ -0.83
SKP1-211ENST00000523359 NR5A1Q13285 461 aa9.85□□□□□ -0.83
SKP1-211ENST00000523359 LCE2CQ5TA81 110 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms