RNA–Protein interactions for RNA: ENST00000523139.5

BRD9-219, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-219ENST00000523139 CGNL1Q0VF96 1302 aa8.66□□□□□ -1.02
BRD9-219ENST00000523139 CARD14Q9BXL6 1004 aa8.66□□□□□ -1.02
BRD9-219ENST00000523139 KIF20BQ96Q89 1820 aa8.66□□□□□ -1.02
BRD9-219ENST00000523139 SBNO1A3KN83 1393 aa8.65□□□□□ -1.02
BRD9-219ENST00000523139 USP31Q70CQ4 1352 aa8.65□□□□□ -1.02
BRD9-219ENST00000523139 NPHP3Q7Z494 1330 aa8.65□□□□□ -1.02
BRD9-219ENST00000523139 TOM1O60784 492 aa8.65□□□□□ -1.02
BRD9-219ENST00000523139 AMER1Q5JTC6 1135 aaPredicted RBP8.65□□□□□ -1.02
BRD9-219ENST00000523139 DIEXFQ68CQ4 756 aaKnown RBP8.65□□□□□ -1.02
BRD9-219ENST00000523139 TMC1Q8TDI8 760 aa8.65□□□□□ -1.02
BRD9-219ENST00000523139 KNSTRNQ9Y448 316 aa8.65□□□□□ -1.02
BRD9-219ENST00000523139 ALS2Q96Q42 1657 aa8.65□□□□□ -1.03
BRD9-219ENST00000523139 NSD3Q9BZ95 1437 aa8.64□□□□□ -1.03
BRD9-219ENST00000523139 PARD3Q8TEW0 1356 aa8.64□□□□□ -1.03
BRD9-219ENST00000523139 SOS2Q07890 1332 aaPredicted RBP8.64□□□□□ -1.03
BRD9-219ENST00000523139 RALBP1Q15311 655 aa8.64□□□□□ -1.03
BRD9-219ENST00000523139 ESCO1Q5FWF5 840 aa8.64□□□□□ -1.03
BRD9-219ENST00000523139 CERKQ8TCT0 537 aa8.64□□□□□ -1.03
BRD9-219ENST00000523139 PXDNQ92626 1479 aa8.64□□□□□ -1.03
BRD9-219ENST00000523139 PSME1Q06323 249 aa8.63□□□□□ -1.03
BRD9-219ENST00000523139 BRINP3Q76B58 766 aa8.63□□□□□ -1.03
BRD9-219ENST00000523139 NGDNQ8NEJ9 315 aaKnown RBP8.63□□□□□ -1.03
BRD9-219ENST00000523139 RBM33Q96EV2 1170 aaKnown RBP8.63□□□□□ -1.03
BRD9-219ENST00000523139 MED1Q15648 1581 aaPredicted RBP8.63□□□□□ -1.03
BRD9-219ENST00000523139 OVOS2A0A0J9YW53 1432 aa8.63□□□□□ -1.03
BRD9-219ENST00000523139 OVOS2Q6IE36 1432 aa8.63□□□□□ -1.03
BRD9-219ENST00000523139 ROBO1Q9Y6N7 1651 aa8.62□□□□□ -1.03
BRD9-219ENST00000523139 TTC21BQ7Z4L5 1316 aa8.62□□□□□ -1.03
BRD9-219ENST00000523139 FYB1O15117 783 aa8.62□□□□□ -1.03
BRD9-219ENST00000523139 ORAI2Q96SN7 254 aa8.62□□□□□ -1.03
BRD9-219ENST00000523139 PRKRIP1Q9H875 184 aaPredicted RBP8.62□□□□□ -1.03
BRD9-219ENST00000523139 PIK3C2AO00443 1686 aa8.62□□□□□ -1.03
BRD9-219ENST00000523139 PHRF1Q9P1Y6 1649 aaKnown RBP8.62□□□□□ -1.03
BRD9-219ENST00000523139 KIF24Q5T7B8 1368 aa8.61□□□□□ -1.03
BRD9-219ENST00000523139 AATKQ6ZMQ8 1374 aa8.61□□□□□ -1.03
BRD9-219ENST00000523139 MARF1Q9Y4F3 1742 aaKnown RBP8.61□□□□□ -1.03
BRD9-219ENST00000523139 POLR3GLQ9BT43 218 aa8.61□□□□□ -1.03
BRD9-219ENST00000523139 COL22A1Q8NFW1 1626 aaPredicted RBP8.61□□□□□ -1.03
BRD9-219ENST00000523139 ARHGEF10O15013 1369 aa8.61□□□□□ -1.03
BRD9-219ENST00000523139 CRYBG1Q9Y4K1 1723 aa8.6□□□□□ -1.03
BRD9-219ENST00000523139 SLIT3O75094 1523 aa8.6□□□□□ -1.03
BRD9-219ENST00000523139 ABCC6O95255 1503 aa8.6□□□□□ -1.03
BRD9-219ENST00000523139 CCER2I3L3R5 266 aa8.6□□□□□ -1.03
BRD9-219ENST00000523139 ANP32CO43423 234 aa8.6□□□□□ -1.03
BRD9-219ENST00000523139 PMFBP1Q8TBY8 1022 aa8.6□□□□□ -1.03
BRD9-219ENST00000523139 TNS3Q68CZ2 1445 aa8.6□□□□□ -1.03
BRD9-219ENST00000523139 SMG6Q86US8 1419 aaKnown RBP8.6□□□□□ -1.03
BRD9-219ENST00000523139 INSRP06213 1382 aa8.6□□□□□ -1.03
BRD9-219ENST00000523139 SPATA31A3Q5VYP0 1347 aa8.59□□□□□ -1.03
BRD9-219ENST00000523139 COL16A1Q07092 1604 aaPredicted RBP8.59□□□□□ -1.03
BRD9-219ENST00000523139 NUTM2FA1L443 756 aa8.59□□□□□ -1.03
BRD9-219ENST00000523139 FOXO3O43524 673 aa8.59□□□□□ -1.03
BRD9-219ENST00000523139 KRT28Q7Z3Y7 464 aa8.59□□□□□ -1.03
BRD9-219ENST00000523139 USP19O94966 1318 aa8.58□□□□□ -1.04
BRD9-219ENST00000523139 MYBBP1AQ9BQG0 1328 aaKnown RBP8.58□□□□□ -1.04
BRD9-219ENST00000523139 NLRP13Q86W25 1043 aa8.58□□□□□ -1.04
BRD9-219ENST00000523139 KCNH5Q8NCM2 988 aa8.57□□□□□ -1.04
BRD9-219ENST00000523139 LRRC59Q96AG4 307 aaKnown RBP8.57□□□□□ -1.04
BRD9-219ENST00000523139 COG3Q96JB2 828 aa8.57□□□□□ -1.04
BRD9-219ENST00000523139 PNPLA6Q8IY17 1366 aa8.57□□□□□ -1.04
BRD9-219ENST00000523139 PHLPP1O60346 1717 aa8.57□□□□□ -1.04
BRD9-219ENST00000523139 SHPRHQ149N8 1683 aa8.56□□□□□ -1.04
BRD9-219ENST00000523139 NFAT5O94916 1531 aa8.56□□□□□ -1.04
BRD9-219ENST00000523139 MAP2P11137 1827 aaKnown RBP8.56□□□□□ -1.04
BRD9-219ENST00000523139 ABCA3Q99758 1704 aa8.55□□□□□ -1.04
BRD9-219ENST00000523139 UBAP1LF5GYI3 381 aa8.55□□□□□ -1.04
BRD9-219ENST00000523139 MORC1Q86VD1 984 aa8.55□□□□□ -1.04
BRD9-219ENST00000523139 ABTB2Q8N961 1025 aa8.55□□□□□ -1.04
BRD9-219ENST00000523139 RTL1A6NKG5 1358 aa8.55□□□□□ -1.04
BRD9-219ENST00000523139 CPDO75976 1380 aa8.55□□□□□ -1.04
BRD9-219ENST00000523139 CDK12Q9NYV4 1490 aaPredicted RBP8.55□□□□□ -1.04
BRD9-219ENST00000523139 PPP2R1AP30153 589 aa8.54□□□□□ -1.04
BRD9-219ENST00000523139 NLRP6P59044 892 aa8.54□□□□□ -1.04
BRD9-219ENST00000523139 NME9Q86XW9 330 aa8.54□□□□□ -1.04
BRD9-219ENST00000523139 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.54□□□□□ -1.04
BRD9-219ENST00000523139 GGNBP2Q9H3C7 697 aa8.54□□□□□ -1.04
BRD9-219ENST00000523139 PLEKHG2Q9H7P9 1386 aa8.53□□□□□ -1.04
BRD9-219ENST00000523139 CC2D1BQ5T0F9 858 aaKnown RBP8.53□□□□□ -1.04
BRD9-219ENST00000523139 LTN1O94822 1766 aa8.53□□□□□ -1.04
BRD9-219ENST00000523139 PAK3O75914 559 aaPredicted RBP8.52□□□□□ -1.05
BRD9-219ENST00000523139 GCP02774 474 aa8.52□□□□□ -1.05
BRD9-219ENST00000523139 POLKQ9UBT6 870 aa8.52□□□□□ -1.05
BRD9-219ENST00000523139 BLMP54132 1417 aaPredicted RBP8.52□□□□□ -1.05
BRD9-219ENST00000523139 COL3A1P02461 1466 aaPredicted RBP8.51□□□□□ -1.05
BRD9-219ENST00000523139 FLT4P35916 1363 aa8.51□□□□□ -1.05
BRD9-219ENST00000523139 JCADQ9P266 1359 aa8.51□□□□□ -1.05
BRD9-219ENST00000523139 COL18A1P39060 1754 aa8.51□□□□□ -1.05
BRD9-219ENST00000523139 FAM208AQ9UK61 1670 aaKnown RBP8.51□□□□□ -1.05
BRD9-219ENST00000523139 ARHGEF25Q86VW2 580 aa8.51□□□□□ -1.05
BRD9-219ENST00000523139 MIER1Q8N108 512 aa8.51□□□□□ -1.05
BRD9-219ENST00000523139 SPATA31A6Q5VVP1 1343 aa8.51□□□□□ -1.05
BRD9-219ENST00000523139 LMO7Q8WWI1 1683 aa8.5□□□□□ -1.05
BRD9-219ENST00000523139 CFAP53Q96M91 514 aa8.5□□□□□ -1.05
BRD9-219ENST00000523139 PEAK1Q9H792 1746 aa8.5□□□□□ -1.05
BRD9-219ENST00000523139 RGPD1P0DJD0 1748 aa8.49□□□□□ -1.05
BRD9-219ENST00000523139 COL14A1Q05707 1796 aaKnown RBP8.49□□□□□ -1.05
BRD9-219ENST00000523139 MTHFSP49914 203 aa8.49□□□□□ -1.05
BRD9-219ENST00000523139 IP6K1Q92551 441 aa8.49□□□□□ -1.05
BRD9-219ENST00000523139 DDX17Q92841 729 aaKnown RBP8.49□□□□□ -1.05
BRD9-219ENST00000523139 CAMTA1Q9Y6Y1 1673 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms