RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 ABCA3Q99758 1704 aa14.86□□□□□ -0.03
DENND3-220ENST00000523066 MARF1Q9Y4F3 1742 aaKnown RBP14.86□□□□□ -0.03
DENND3-220ENST00000523066 CABLES1Q8TDN4 633 aa14.86□□□□□ -0.03
DENND3-220ENST00000523066 CABP1Q9NZU7 370 aa14.86□□□□□ -0.03
DENND3-220ENST00000523066 USP47Q96K76 1375 aa14.85□□□□□ -0.03
DENND3-220ENST00000523066 SBNO2Q9Y2G9 1366 aa14.85□□□□□ -0.03
DENND3-220ENST00000523066 PLEKHG3A1L390 1219 aa14.85□□□□□ -0.03
DENND3-220ENST00000523066 MYCNP04198 464 aaPredicted RBP14.85□□□□□ -0.03
DENND3-220ENST00000523066 POTEAQ6S8J7 498 aa14.85□□□□□ -0.03
DENND3-220ENST00000523066 TESK2Q96S53 571 aa14.85□□□□□ -0.03
DENND3-220ENST00000523066 POLR3AO14802 1390 aaPredicted RBP14.85□□□□□ -0.03
DENND3-220ENST00000523066 PAK3O75914 559 aaPredicted RBP14.84□□□□□ -0.03
DENND3-220ENST00000523066 C8orf37Q96NL8 207 aa14.84□□□□□ -0.03
DENND3-220ENST00000523066 AKAP12Q02952 1782 aa14.83□□□□□ -0.03
DENND3-220ENST00000523066 CRYBG1Q9Y4K1 1723 aa14.83□□□□□ -0.04
DENND3-220ENST00000523066 NUTM2GQ5VZR2 741 aa14.82□□□□□ -0.04
DENND3-220ENST00000523066 AFF2P51816 1311 aa14.82□□□□□ -0.04
DENND3-220ENST00000523066 ARHGEF10O15013 1369 aa14.8□□□□□ -0.04
DENND3-220ENST00000523066 USP6P35125 1406 aa14.79□□□□□ -0.04
DENND3-220ENST00000523066 ATAD2Q6PL18 1390 aa14.79□□□□□ -0.04
DENND3-220ENST00000523066 NGLY1Q96IV0 654 aa14.79□□□□□ -0.04
DENND3-220ENST00000523066 MON2Q7Z3U7 1717 aa14.78□□□□□ -0.04
DENND3-220ENST00000523066 PHRF1Q9P1Y6 1649 aaKnown RBP14.78□□□□□ -0.04
DENND3-220ENST00000523066 HAP1P54257 671 aaPredicted RBP14.78□□□□□ -0.04
DENND3-220ENST00000523066 SLC12A5Q9H2X9 1139 aa14.78□□□□□ -0.04
DENND3-220ENST00000523066 CD163L1Q9NR16 1453 aa14.77□□□□□ -0.04
DENND3-220ENST00000523066 TMC1Q8TDI8 760 aa14.77□□□□□ -0.05
DENND3-220ENST00000523066 NRKQ7Z2Y5 1582 aa14.77□□□□□ -0.05
DENND3-220ENST00000523066 CPSF1Q10570 1443 aaKnown RBP14.76□□□□□ -0.05
DENND3-220ENST00000523066 ABTB2Q8N961 1025 aa14.76□□□□□ -0.05
DENND3-220ENST00000523066 PIK3C2AO00443 1686 aa14.76□□□□□ -0.05
DENND3-220ENST00000523066 PLCH1Q4KWH8 1693 aa14.76□□□□□ -0.05
DENND3-220ENST00000523066 SSH2Q76I76 1423 aa14.75□□□□□ -0.05
DENND3-220ENST00000523066 HSPA5P11021 654 aaKnown RBP14.75□□□□□ -0.05
DENND3-220ENST00000523066 ZNF772Q68DY9 489 aaPredicted RBP14.75□□□□□ -0.05
DENND3-220ENST00000523066 USP21Q9UK80 565 aa14.75□□□□□ -0.05
DENND3-220ENST00000523066 TMF1P82094 1093 aa14.74□□□□□ -0.05
DENND3-220ENST00000523066 KTN1Q86UP2 1357 aaKnown RBP14.73□□□□□ -0.05
DENND3-220ENST00000523066 FAM83GA6ND36 823 aa14.73□□□□□ -0.05
DENND3-220ENST00000523066 FNBP4Q8N3X1 1017 aaPredicted RBP14.73□□□□□ -0.05
DENND3-220ENST00000523066 BCL9LQ86UU0 1499 aa14.73□□□□□ -0.05
DENND3-220ENST00000523066 TTC21BQ7Z4L5 1316 aa14.72□□□□□ -0.05
DENND3-220ENST00000523066 MYOM1P52179 1685 aa14.72□□□□□ -0.05
DENND3-220ENST00000523066 QTRT2Q9H974 415 aaKnown RBP14.72□□□□□ -0.05
DENND3-220ENST00000523066 ZRANB1Q9UGI0 708 aa14.72□□□□□ -0.05
DENND3-220ENST00000523066 A0A1W2PP64 1363 aa14.72□□□□□ -0.05
DENND3-220ENST00000523066 SLIT2O94813 1529 aa14.71□□□□□ -0.05
DENND3-220ENST00000523066 ZC3H6P61129 1189 aaKnown RBP14.71□□□□□ -0.05
DENND3-220ENST00000523066 EIF4G2P78344 907 aaKnown RBP eCLIP14.71□□□□□ -0.05
DENND3-220ENST00000523066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.71□□□□□ -0.05
DENND3-220ENST00000523066 PUS7Q96PZ0 661 aaKnown RBP14.71□□□□□ -0.05
DENND3-220ENST00000523066 ZNF692Q9BU19 519 aaPredicted RBP14.71□□□□□ -0.05
DENND3-220ENST00000523066 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.71□□□□□ -0.05
DENND3-220ENST00000523066 USP19O94966 1318 aa14.7□□□□□ -0.06
DENND3-220ENST00000523066 NRAPQ86VF7 1730 aa14.7□□□□□ -0.06
DENND3-220ENST00000523066 NLRP6P59044 892 aa14.7□□□□□ -0.06
DENND3-220ENST00000523066 CHRNA2Q15822 529 aa14.7□□□□□ -0.06
DENND3-220ENST00000523066 BRD4O60885 1362 aaPredicted RBP14.7□□□□□ -0.06
DENND3-220ENST00000523066 KIAA0232Q92628 1395 aa14.7□□□□□ -0.06
DENND3-220ENST00000523066 COL14A1Q05707 1796 aaKnown RBP14.7□□□□□ -0.06
DENND3-220ENST00000523066 NWD2Q9ULI1 1742 aa14.69□□□□□ -0.06
DENND3-220ENST00000523066 ATRNO75882 1429 aa14.69□□□□□ -0.06
DENND3-220ENST00000523066 HDGFL2Q7Z4V5 671 aaPredicted RBP14.69□□□□□ -0.06
DENND3-220ENST00000523066 NLRP13Q86W25 1043 aa14.69□□□□□ -0.06
DENND3-220ENST00000523066 ATXN8OSP0DMR3 200 aa14.68□□□□□ -0.06
DENND3-220ENST00000523066 RXRBP28702 533 aa14.68□□□□□ -0.06
DENND3-220ENST00000523066 NME9Q86XW9 330 aa14.68□□□□□ -0.06
DENND3-220ENST00000523066 POLR3GLQ9BT43 218 aa14.68□□□□□ -0.06
DENND3-220ENST00000523066 TRPC5Q9UL62 973 aaPredicted RBP14.68□□□□□ -0.06
DENND3-220ENST00000523066 SLIT3O75094 1523 aa14.67□□□□□ -0.06
DENND3-220ENST00000523066 C11orf95C9JLR9 678 aaPredicted RBP14.67□□□□□ -0.06
DENND3-220ENST00000523066 SOX12O15370 315 aa14.67□□□□□ -0.06
DENND3-220ENST00000523066 SLC24A1O60721 1099 aa14.67□□□□□ -0.06
DENND3-220ENST00000523066 GCP02774 474 aa14.67□□□□□ -0.06
DENND3-220ENST00000523066 UNC5CLQ8IV45 518 aa14.67□□□□□ -0.06
DENND3-220ENST00000523066 PRDM11Q9NQV5 511 aa14.67□□□□□ -0.06
DENND3-220ENST00000523066 BTG4Q9NY30 223 aa14.67□□□□□ -0.06
DENND3-220ENST00000523066 TERF2IPQ9NYB0 399 aa14.67□□□□□ -0.06
DENND3-220ENST00000523066 GLI3P10071 1580 aa14.67□□□□□ -0.06
DENND3-220ENST00000523066 TTC21AQ8NDW8 1320 aa14.66□□□□□ -0.06
DENND3-220ENST00000523066 RGPD5Q99666 1765 aa14.66□□□□□ -0.06
DENND3-220ENST00000523066 ZBTB7CA1YPR0 619 aa14.66□□□□□ -0.06
DENND3-220ENST00000523066 EDC4Q6P2E9 1401 aaKnown RBP14.66□□□□□ -0.06
DENND3-220ENST00000523066 NINLQ9Y2I6 1382 aa14.65□□□□□ -0.06
DENND3-220ENST00000523066 RBM6P78332 1123 aaKnown RBP14.65□□□□□ -0.06
DENND3-220ENST00000523066 RGS12O14924 1447 aa14.65□□□□□ -0.06
DENND3-220ENST00000523066 USP54Q70EL1 1684 aa14.65□□□□□ -0.06
DENND3-220ENST00000523066 LMO7Q8WWI1 1683 aa14.65□□□□□ -0.06
DENND3-220ENST00000523066 ANKRD36BQ8N2N9 1353 aa14.64□□□□□ -0.07
DENND3-220ENST00000523066 SOCS7O14512 581 aa14.64□□□□□ -0.07
DENND3-220ENST00000523066 CAMTA1Q9Y6Y1 1673 aa14.64□□□□□ -0.07
DENND3-220ENST00000523066 COL18A1P39060 1754 aa14.63□□□□□ -0.07
DENND3-220ENST00000523066 CDCA8Q53HL2 280 aa14.63□□□□□ -0.07
DENND3-220ENST00000523066 GJD4Q96KN9 370 aaPredicted RBP14.63□□□□□ -0.07
DENND3-220ENST00000523066 NFAT5O94916 1531 aa14.62□□□□□ -0.07
DENND3-220ENST00000523066 CARD14Q9BXL6 1004 aa14.62□□□□□ -0.07
DENND3-220ENST00000523066 STRN4Q9NRL3 753 aa14.62□□□□□ -0.07
DENND3-220ENST00000523066 CCDC9Q9Y3X0 531 aaKnown RBP14.62□□□□□ -0.07
DENND3-220ENST00000523066 LTN1O94822 1766 aa14.62□□□□□ -0.07
DENND3-220ENST00000523066 KIF20BQ96Q89 1820 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms