RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 ADGBQ8N7X0 1667 aa10.57□□□□□ -0.72
VPS13B-211ENST00000522802 A2MP01023 1474 aa10.57□□□□□ -0.72
VPS13B-211ENST00000522802 PRSS12P56730 875 aa10.57□□□□□ -0.72
VPS13B-211ENST00000522802 TTC13Q8NBP0 860 aa10.57□□□□□ -0.72
VPS13B-211ENST00000522802 RBM27Q9P2N5 1060 aaKnown RBP10.57□□□□□ -0.72
VPS13B-211ENST00000522802 HCSTQ9UBK5 93 aa10.57□□□□□ -0.72
VPS13B-211ENST00000522802 TOM1O60784 492 aa10.56□□□□□ -0.72
VPS13B-211ENST00000522802 SYNMO15061 1565 aa10.56□□□□□ -0.72
VPS13B-211ENST00000522802 SETD1AO15047 1707 aaKnown RBP10.55□□□□□ -0.72
VPS13B-211ENST00000522802 IQGAP1P46940 1657 aa10.55□□□□□ -0.72
VPS13B-211ENST00000522802 CDCA7LQ96GN5 454 aa10.55□□□□□ -0.72
VPS13B-211ENST00000522802 ZBED2Q9BTP6 218 aa10.55□□□□□ -0.72
VPS13B-211ENST00000522802 CCDC18Q5T9S5 1454 aa10.55□□□□□ -0.72
VPS13B-211ENST00000522802 DMRTA1Q5VZB9 504 aa10.54□□□□□ -0.72
VPS13B-211ENST00000522802 SLC4A5Q9BY07 1137 aa10.54□□□□□ -0.72
VPS13B-211ENST00000522802 DEPDC5O75140 1603 aa10.54□□□□□ -0.72
VPS13B-211ENST00000522802 SPAG9O60271 1321 aaKnown RBP10.54□□□□□ -0.72
VPS13B-211ENST00000522802 MINK1Q8N4C8 1332 aaPredicted RBP10.54□□□□□ -0.72
VPS13B-211ENST00000522802 ONECUT3O60422 494 aaPredicted RBP10.53□□□□□ -0.72
VPS13B-211ENST00000522802 RGS17Q9UGC6 210 aaPredicted RBP10.53□□□□□ -0.72
VPS13B-211ENST00000522802 GPATCH8Q9UKJ3 1502 aaKnown RBP10.53□□□□□ -0.72
VPS13B-211ENST00000522802 IRF6O14896 467 aa10.52□□□□□ -0.73
VPS13B-211ENST00000522802 MAP2K5Q13163 448 aa10.52□□□□□ -0.73
VPS13B-211ENST00000522802 PADI6Q6TGC4 694 aa10.52□□□□□ -0.73
VPS13B-211ENST00000522802 KRI1Q8N9T8 703 aaKnown RBP10.52□□□□□ -0.73
VPS13B-211ENST00000522802 FAM198AQ9UFP1 575 aa10.52□□□□□ -0.73
VPS13B-211ENST00000522802 LRRC7Q96NW7 1537 aa10.52□□□□□ -0.73
VPS13B-211ENST00000522802 TRIM6-TRIM34B2RNG4 842 aa10.51□□□□□ -0.73
VPS13B-211ENST00000522802 GGT6Q6P531 493 aa10.51□□□□□ -0.73
VPS13B-211ENST00000522802 SLC24A3Q9HC58 644 aa10.51□□□□□ -0.73
VPS13B-211ENST00000522802 TSKSQ9UJT2 592 aa10.51□□□□□ -0.73
VPS13B-211ENST00000522802 ZNF777Q9ULD5 760 aaPredicted RBP10.51□□□□□ -0.73
VPS13B-211ENST00000522802 KDM5DQ9BY66 1539 aa10.51□□□□□ -0.73
VPS13B-211ENST00000522802 TNRQ92752 1358 aa10.51□□□□□ -0.73
VPS13B-211ENST00000522802 ZC3H13Q5T200 1668 aaKnown RBP10.5□□□□□ -0.73
VPS13B-211ENST00000522802 NPHP4O75161 1426 aaPredicted RBP10.5□□□□□ -0.73
VPS13B-211ENST00000522802 CASKIN1Q8WXD9 1431 aa10.5□□□□□ -0.73
VPS13B-211ENST00000522802 MED14O60244 1454 aa10.5□□□□□ -0.73
VPS13B-211ENST00000522802 PZPP20742 1482 aa10.5□□□□□ -0.73
VPS13B-211ENST00000522802 XIRP1Q702N8 1843 aaKnown RBP10.5□□□□□ -0.73
VPS13B-211ENST00000522802 HRO43593 1189 aa10.5□□□□□ -0.73
VPS13B-211ENST00000522802 HNRNPMP52272 730 aaKnown RBP eCLIP10.5□□□□□ -0.731e-7■■■■■ 31.6
VPS13B-211ENST00000522802 PROX2Q3B8N5 592 aa10.5□□□□□ -0.73
VPS13B-211ENST00000522802 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.5□□□□□ -0.73
VPS13B-211ENST00000522802 TK2O00142 265 aa10.49□□□□□ -0.73
VPS13B-211ENST00000522802 KIAA1107Q9UPP5 1409 aa10.49□□□□□ -0.73
VPS13B-211ENST00000522802 UGGT1Q9NYU2 1555 aa10.48□□□□□ -0.73
VPS13B-211ENST00000522802 FBXO31Q5XUX0 539 aaPredicted RBP10.48□□□□□ -0.73
VPS13B-211ENST00000522802 AK7Q96M32 723 aa10.48□□□□□ -0.73
VPS13B-211ENST00000522802 VPS9D1Q9Y2B5 631 aa10.48□□□□□ -0.73
VPS13B-211ENST00000522802 PLEKHH2Q8IVE3 1493 aa10.48□□□□□ -0.73
VPS13B-211ENST00000522802 FYCO1Q9BQS8 1478 aa10.48□□□□□ -0.73
VPS13B-211ENST00000522802 ADGRG1Q9Y653 693 aa10.47□□□□□ -0.73
VPS13B-211ENST00000522802 UBTFP17480 764 aaKnown RBP10.46□□□□□ -0.73
VPS13B-211ENST00000522802 PACS2Q86VP3 889 aa10.46□□□□□ -0.73
VPS13B-211ENST00000522802 KIAA1468Q9P260 1216 aa10.46□□□□□ -0.73
VPS13B-211ENST00000522802 RABGEF1Q9UJ41 708 aa10.46□□□□□ -0.73
VPS13B-211ENST00000522802 NLRP1Q9C000 1473 aa10.46□□□□□ -0.74
VPS13B-211ENST00000522802 FAM135AQ9P2D6 1515 aa10.46□□□□□ -0.74
VPS13B-211ENST00000522802 TIAM1Q13009 1591 aa10.46□□□□□ -0.74
VPS13B-211ENST00000522802 C3orf80F5H4A9 247 aa10.45□□□□□ -0.74
VPS13B-211ENST00000522802 FAM161AQ3B820 660 aa10.45□□□□□ -0.74
VPS13B-211ENST00000522802 CCDC102AQ96A19 550 aa10.45□□□□□ -0.74
VPS13B-211ENST00000522802 BHMG1C9JSJ3 638 aaPredicted RBP10.44□□□□□ -0.74
VPS13B-211ENST00000522802 OATP04181 439 aa10.44□□□□□ -0.74
VPS13B-211ENST00000522802 POTEAQ6S8J7 498 aa10.44□□□□□ -0.74
VPS13B-211ENST00000522802 KCTD12Q96CX2 325 aaKnown RBP10.44□□□□□ -0.74
VPS13B-211ENST00000522802 MBD5Q9P267 1494 aa10.43□□□□□ -0.74
VPS13B-211ENST00000522802 TRIM66O15016 1216 aa10.43□□□□□ -0.74
VPS13B-211ENST00000522802 ANKLE2Q86XL3 938 aa10.43□□□□□ -0.74
VPS13B-211ENST00000522802 TATDN2Q93075 761 aa10.43□□□□□ -0.74
VPS13B-211ENST00000522802 EYA1Q99502 592 aa10.43□□□□□ -0.74
VPS13B-211ENST00000522802 SRCAPQ6ZRS2 3230 aa10.43□□□□□ -0.74
VPS13B-211ENST00000522802 UBR1Q8IWV7 1749 aa10.43□□□□□ -0.74
VPS13B-211ENST00000522802 NUDT18Q6ZVK8 323 aa10.42□□□□□ -0.74
VPS13B-211ENST00000522802 METTL3Q86U44 580 aaKnown RBP10.42□□□□□ -0.74
VPS13B-211ENST00000522802 PXYLP1Q8TE99 480 aa10.42□□□□□ -0.74
VPS13B-211ENST00000522802 MIA2Q96PC5 1412 aa10.41□□□□□ -0.74
VPS13B-211ENST00000522802 CCNB3Q8WWL7 1395 aa10.41□□□□□ -0.74
VPS13B-211ENST00000522802 ROBO1Q9Y6N7 1651 aa10.41□□□□□ -0.74
VPS13B-211ENST00000522802 ZNF644Q9H582 1327 aaPredicted RBP10.41□□□□□ -0.74
VPS13B-211ENST00000522802 NBPF26B4DH59 902 aa10.41□□□□□ -0.74
VPS13B-211ENST00000522802 RBM46Q8TBY0 533 aaKnown RBP10.41□□□□□ -0.74
VPS13B-211ENST00000522802 PHOX2BQ99453 314 aa10.41□□□□□ -0.74
VPS13B-211ENST00000522802 CFDP1Q9UEE9 299 aaPredicted RBP10.41□□□□□ -0.74
VPS13B-211ENST00000522802 DHX29Q7Z478 1369 aaKnown RBP10.4□□□□□ -0.74
VPS13B-211ENST00000522802 PNMA3Q9UL41 463 aa10.4□□□□□ -0.74
VPS13B-211ENST00000522802 RTEL1-TNFRSF6BF6WH68 1400 aa10.4□□□□□ -0.75
VPS13B-211ENST00000522802 ABCC3O15438 1527 aa10.39□□□□□ -0.75
VPS13B-211ENST00000522802 CEP152O94986 1710 aa10.38□□□□□ -0.75
VPS13B-211ENST00000522802 MAP3K1Q13233 1512 aa10.38□□□□□ -0.75
VPS13B-211ENST00000522802 ERVK-7P63135 1459 aa10.38□□□□□ -0.75
VPS13B-211ENST00000522802 SCAF11Q99590 1463 aaKnown RBP10.38□□□□□ -0.75
VPS13B-211ENST00000522802 MROH1Q8NDA8 1641 aa10.38□□□□□ -0.75
VPS13B-211ENST00000522802 SMAPO00193 183 aa10.38□□□□□ -0.75
VPS13B-211ENST00000522802 KIF3BO15066 747 aa10.38□□□□□ -0.75
VPS13B-211ENST00000522802 THEMISQ8N1K5 641 aaPredicted RBP10.38□□□□□ -0.75
VPS13B-211ENST00000522802 NCOA2Q15596 1464 aa10.37□□□□□ -0.75
VPS13B-211ENST00000522802 CCDC141Q6ZP82 1450 aa10.37□□□□□ -0.75
VPS13B-211ENST00000522802 AMHR2Q16671 573 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms