RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 USP6P35125 1406 aa20.69■□□□□ 0.9
CTNNA1-236ENST00000522792 ADAMTS8Q9UP79 889 aa20.68■□□□□ 0.9
CTNNA1-236ENST00000522792 POLR3AO14802 1390 aaPredicted RBP20.67■□□□□ 0.9
CTNNA1-236ENST00000522792 ZBED9Q6R2W3 1325 aa20.67■□□□□ 0.9
CTNNA1-236ENST00000522792 TTC21BQ7Z4L5 1316 aa20.66■□□□□ 0.9
CTNNA1-236ENST00000522792 BLMP54132 1417 aaPredicted RBP20.65■□□□□ 0.9
CTNNA1-236ENST00000522792 TMEM94Q12767 1356 aa20.64■□□□□ 0.9
CTNNA1-236ENST00000522792 FBLN1P23142 703 aa20.63■□□□□ 0.89
CTNNA1-236ENST00000522792 COG3Q96JB2 828 aa20.63■□□□□ 0.89
CTNNA1-236ENST00000522792 CFAP53Q96M91 514 aa20.63■□□□□ 0.89
CTNNA1-236ENST00000522792 SHPRHQ149N8 1683 aa20.62■□□□□ 0.89
CTNNA1-236ENST00000522792 PHF8Q9UPP1 1060 aa20.62■□□□□ 0.89
CTNNA1-236ENST00000522792 SSH2Q76I76 1423 aa20.62■□□□□ 0.89
CTNNA1-236ENST00000522792 ESCO1Q5FWF5 840 aa20.61■□□□□ 0.89
CTNNA1-236ENST00000522792 SALL2Q9Y467 1007 aaPredicted RBP20.61■□□□□ 0.89
CTNNA1-236ENST00000522792 INSRP06213 1382 aa20.6■□□□□ 0.89
CTNNA1-236ENST00000522792 C19orf44Q9H6X5 657 aa20.6■□□□□ 0.89
CTNNA1-236ENST00000522792 ZNF335Q9H4Z2 1342 aaPredicted RBP20.58■□□□□ 0.89
CTNNA1-236ENST00000522792 PPM1GO15355 546 aaPredicted RBP20.58■□□□□ 0.88
CTNNA1-236ENST00000522792 CCDC146Q8IYE0 955 aa20.58■□□□□ 0.88
CTNNA1-236ENST00000522792 ORAI2Q96SN7 254 aa20.58■□□□□ 0.88
CTNNA1-236ENST00000522792 TTC21AQ8NDW8 1320 aa20.58■□□□□ 0.88
CTNNA1-236ENST00000522792 SCAF1Q9H7N4 1312 aaKnown RBP20.58■□□□□ 0.88
CTNNA1-236ENST00000522792 OVOS2A0A0J9YW53 1432 aa20.57■□□□□ 0.88
CTNNA1-236ENST00000522792 OVOS2Q6IE36 1432 aa20.57■□□□□ 0.88
CTNNA1-236ENST00000522792 POLKQ9UBT6 870 aa20.56■□□□□ 0.88
CTNNA1-236ENST00000522792 GTF3C3Q9Y5Q9 886 aa20.56■□□□□ 0.88
CTNNA1-236ENST00000522792 COL3A1P02461 1466 aaPredicted RBP20.56■□□□□ 0.88
CTNNA1-236ENST00000522792 PIK3C2AO00443 1686 aa20.55■□□□□ 0.88
CTNNA1-236ENST00000522792 MAP2P11137 1827 aaKnown RBP20.55■□□□□ 0.88
CTNNA1-236ENST00000522792 ATF3P18847 181 aa20.55■□□□□ 0.88
CTNNA1-236ENST00000522792 EMILIN1Q9Y6C2 1016 aa20.55■□□□□ 0.88
CTNNA1-236ENST00000522792 NCOA3Q9Y6Q9 1424 aa20.55■□□□□ 0.88
CTNNA1-236ENST00000522792 C1orf167Q5SNV9 1468 aa20.54■□□□□ 0.88
CTNNA1-236ENST00000522792 PAK3O75914 559 aaPredicted RBP20.54■□□□□ 0.88
CTNNA1-236ENST00000522792 RRS1Q15050 365 aaKnown RBP20.54■□□□□ 0.88
CTNNA1-236ENST00000522792 AATKQ6ZMQ8 1374 aa20.53■□□□□ 0.88
CTNNA1-236ENST00000522792 XIRP1Q702N8 1843 aaKnown RBP20.53■□□□□ 0.88
CTNNA1-236ENST00000522792 SOX12O15370 315 aa20.53■□□□□ 0.88
CTNNA1-236ENST00000522792 PSME1Q06323 249 aa20.52■□□□□ 0.88
CTNNA1-236ENST00000522792 LRRC7Q96NW7 1537 aa20.52■□□□□ 0.88
CTNNA1-236ENST00000522792 DCCP43146 1447 aa20.52■□□□□ 0.88
CTNNA1-236ENST00000522792 MST1RQ04912 1400 aa20.52■□□□□ 0.88
CTNNA1-236ENST00000522792 NUTM2GQ5VZR2 741 aa20.51■□□□□ 0.87
CTNNA1-236ENST00000522792 MSH6P52701 1360 aa20.51■□□□□ 0.87
CTNNA1-236ENST00000522792 PNPLA6Q8IY17 1366 aa20.51■□□□□ 0.87
CTNNA1-236ENST00000522792 U2SURPO15042 1029 aaKnown RBP20.51■□□□□ 0.87
CTNNA1-236ENST00000522792 SMG6Q86US8 1419 aaKnown RBP20.51■□□□□ 0.87
CTNNA1-236ENST00000522792 FOXO3O43524 673 aa20.5■□□□□ 0.87
CTNNA1-236ENST00000522792 U2AF1L5P0DN76 240 aaPredicted RBP20.5■□□□□ 0.87
CTNNA1-236ENST00000522792 U2AF1Q01081 240 aaKnown RBP eCLIP20.5■□□□□ 0.87
CTNNA1-236ENST00000522792 XPCQ01831 940 aaPredicted RBP20.5■□□□□ 0.87
CTNNA1-236ENST00000522792 USP31Q70CQ4 1352 aa20.5■□□□□ 0.87
CTNNA1-236ENST00000522792 MSH5O43196 834 aa20.49■□□□□ 0.87
CTNNA1-236ENST00000522792 DIAPH1O60610 1272 aaKnown RBP20.49■□□□□ 0.87
CTNNA1-236ENST00000522792 NLRP6P59044 892 aa20.49■□□□□ 0.87
CTNNA1-236ENST00000522792 ABTB2Q8N961 1025 aa20.49■□□□□ 0.87
CTNNA1-236ENST00000522792 NUDCQ9Y266 331 aa20.49■□□□□ 0.87
CTNNA1-236ENST00000522792 CADPS2Q86UW7 1296 aa20.48■□□□□ 0.87
CTNNA1-236ENST00000522792 DMRT2Q9Y5R5 561 aa20.48■□□□□ 0.87
CTNNA1-236ENST00000522792 CDK12Q9NYV4 1490 aaPredicted RBP20.48■□□□□ 0.87
CTNNA1-236ENST00000522792 KIF1AQ12756 1690 aa20.48■□□□□ 0.87
CTNNA1-236ENST00000522792 APAF1O14727 1248 aa20.48■□□□□ 0.87
CTNNA1-236ENST00000522792 MARF1Q9Y4F3 1742 aaKnown RBP20.47■□□□□ 0.87
CTNNA1-236ENST00000522792 RUNDC1Q96C34 613 aa20.44■□□□□ 0.86
CTNNA1-236ENST00000522792 USP54Q70EL1 1684 aa20.44■□□□□ 0.86
CTNNA1-236ENST00000522792 PEAK1Q9H792 1746 aa20.43■□□□□ 0.86
CTNNA1-236ENST00000522792 KRT28Q7Z3Y7 464 aa20.43■□□□□ 0.86
CTNNA1-236ENST00000522792 DDX17Q92841 729 aaKnown RBP20.42■□□□□ 0.86
CTNNA1-236ENST00000522792 CDCA7LQ96GN5 454 aa20.42■□□□□ 0.86
CTNNA1-236ENST00000522792 MAP3K19Q56UN5 1328 aa20.42■□□□□ 0.86
CTNNA1-236ENST00000522792 IL13P35225 146 aa20.41■□□□□ 0.86
CTNNA1-236ENST00000522792 TRPM3Q9HCF6 1732 aaPredicted RBP20.41■□□□□ 0.86
CTNNA1-236ENST00000522792 RRP7AQ9Y3A4 280 aaKnown RBP20.41■□□□□ 0.86
CTNNA1-236ENST00000522792 IQSEC2Q5JU85 1478 aa20.4■□□□□ 0.86
CTNNA1-236ENST00000522792 PLEKHG5O94827 1062 aa20.4■□□□□ 0.86
CTNNA1-236ENST00000522792 LMOD2Q6P5Q4 547 aa20.4■□□□□ 0.86
CTNNA1-236ENST00000522792 PDE3BQ13370 1112 aa20.39■□□□□ 0.86
CTNNA1-236ENST00000522792 TCP11L2Q8N4U5 519 aa20.39■□□□□ 0.86
CTNNA1-236ENST00000522792 NEUROD2Q15784 382 aa20.39■□□□□ 0.85
CTNNA1-236ENST00000522792 SUPT16HQ9Y5B9 1047 aaKnown RBP20.39■□□□□ 0.85
CTNNA1-236ENST00000522792 HSP90AB2PQ58FF8 381 aa20.38■□□□□ 0.85
CTNNA1-236ENST00000522792 ZNF521Q96K83 1311 aa20.38■□□□□ 0.85
CTNNA1-236ENST00000522792 PLEKHF1Q96S99 279 aa20.37■□□□□ 0.85
CTNNA1-236ENST00000522792 HMOX1P09601 288 aa20.37■□□□□ 0.85
CTNNA1-236ENST00000522792 EIF4A2Q14240 407 aaKnown RBP20.37■□□□□ 0.85
CTNNA1-236ENST00000522792 SBNO1A3KN83 1393 aa20.36■□□□□ 0.85
CTNNA1-236ENST00000522792 AMPHP49418 695 aa20.36■□□□□ 0.85
CTNNA1-236ENST00000522792 FLT4P35916 1363 aa20.35■□□□□ 0.85
CTNNA1-236ENST00000522792 MAPK8IP3Q9UPT6 1336 aa20.35■□□□□ 0.85
CTNNA1-236ENST00000522792 BRINP3Q76B58 766 aa20.35■□□□□ 0.85
CTNNA1-236ENST00000522792 RSPH6AQ9H0K4 717 aa20.34■□□□□ 0.85
CTNNA1-236ENST00000522792 SLAIN2Q9P270 581 aa20.34■□□□□ 0.85
CTNNA1-236ENST00000522792 NPHP3Q7Z494 1330 aa20.34■□□□□ 0.85
CTNNA1-236ENST00000522792 PRKAR2BP31323 418 aa20.34■□□□□ 0.85
CTNNA1-236ENST00000522792 FCHSD2O94868 740 aa20.33■□□□□ 0.85
CTNNA1-236ENST00000522792 GOLGA2Q08379 1002 aa20.33■□□□□ 0.85
CTNNA1-236ENST00000522792 NFAT5O94916 1531 aa20.33■□□□□ 0.85
CTNNA1-236ENST00000522792 ALS2Q96Q42 1657 aa20.33■□□□□ 0.84
CTNNA1-236ENST00000522792 NGEFQ8N5V2 710 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms