RNA–Protein interactions for RNA: ENST00000522767.1

AP003548.1-202, humanhuman

TSL 4 BASIC

Gene AP003548.1, Length 552 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003548.1-202ENST00000522767 NEFLP07196 543 aa13.92□□□□□ -0.18
AP003548.1-202ENST00000522767 PDE3BQ13370 1112 aa13.92□□□□□ -0.18
AP003548.1-202ENST00000522767 NME9Q86XW9 330 aa13.92□□□□□ -0.18
AP003548.1-202ENST00000522767 NALCNQ8IZF0 1738 aa13.92□□□□□ -0.18
AP003548.1-202ENST00000522767 TTC21BQ7Z4L5 1316 aa13.91□□□□□ -0.18
AP003548.1-202ENST00000522767 TTC21AQ8NDW8 1320 aa13.91□□□□□ -0.18
AP003548.1-202ENST00000522767 HSPA2P54652 639 aa13.91□□□□□ -0.18
AP003548.1-202ENST00000522767 NGEFQ8N5V2 710 aa13.91□□□□□ -0.18
AP003548.1-202ENST00000522767 PMFBP1Q8TBY8 1022 aa13.91□□□□□ -0.18
AP003548.1-202ENST00000522767 FBXO41Q8TF61 875 aa13.91□□□□□ -0.18
AP003548.1-202ENST00000522767 RGPD8O14715 1765 aaPredicted RBP13.9□□□□□ -0.18
AP003548.1-202ENST00000522767 SALL2Q9Y467 1007 aaPredicted RBP13.89□□□□□ -0.19
AP003548.1-202ENST00000522767 SMG6Q86US8 1419 aaKnown RBP13.89□□□□□ -0.19
AP003548.1-202ENST00000522767 AATKQ6ZMQ8 1374 aa13.88□□□□□ -0.19
AP003548.1-202ENST00000522767 PHF8Q9UPP1 1060 aa13.88□□□□□ -0.19
AP003548.1-202ENST00000522767 NRKQ7Z2Y5 1582 aa13.88□□□□□ -0.19
AP003548.1-202ENST00000522767 RBM33Q96EV2 1170 aaKnown RBP13.87□□□□□ -0.19
AP003548.1-202ENST00000522767 PNNQ9H307 717 aaKnown RBP13.87□□□□□ -0.19
AP003548.1-202ENST00000522767 SHPRHQ149N8 1683 aa13.87□□□□□ -0.19
AP003548.1-202ENST00000522767 NCOA3Q9Y6Q9 1424 aa13.87□□□□□ -0.19
AP003548.1-202ENST00000522767 SENP3-EIF4A1A0A087X0R7 540 aa13.86□□□□□ -0.19
AP003548.1-202ENST00000522767 PPM1GO15355 546 aaPredicted RBP13.86□□□□□ -0.19
AP003548.1-202ENST00000522767 DIAPH1O60610 1272 aaKnown RBP13.86□□□□□ -0.19
AP003548.1-202ENST00000522767 U2AF1L5P0DN76 240 aaPredicted RBP13.86□□□□□ -0.19
AP003548.1-202ENST00000522767 U2AF1Q01081 240 aaKnown RBP eCLIP13.86□□□□□ -0.19
AP003548.1-202ENST00000522767 CCDC146Q8IYE0 955 aa13.86□□□□□ -0.19
AP003548.1-202ENST00000522767 RUNDC1Q96C34 613 aa13.86□□□□□ -0.19
AP003548.1-202ENST00000522767 C19orf44Q9H6X5 657 aa13.86□□□□□ -0.19
AP003548.1-202ENST00000522767 POLKQ9UBT6 870 aa13.86□□□□□ -0.19
AP003548.1-202ENST00000522767 MAP2P11137 1827 aaKnown RBP13.85□□□□□ -0.19
AP003548.1-202ENST00000522767 SSH2Q76I76 1423 aa13.85□□□□□ -0.19
AP003548.1-202ENST00000522767 U2SURPO15042 1029 aaKnown RBP13.85□□□□□ -0.19
AP003548.1-202ENST00000522767 ESCO1Q5FWF5 840 aa13.85□□□□□ -0.19
AP003548.1-202ENST00000522767 ZRANB1Q9UGI0 708 aa13.85□□□□□ -0.19
AP003548.1-202ENST00000522767 PNPLA6Q8IY17 1366 aa13.84□□□□□ -0.19
AP003548.1-202ENST00000522767 ATF3P18847 181 aa13.84□□□□□ -0.19
AP003548.1-202ENST00000522767 SUPT16HQ9Y5B9 1047 aaKnown RBP13.84□□□□□ -0.19
AP003548.1-202ENST00000522767 OVOS2A0A0J9YW53 1432 aa13.83□□□□□ -0.2
AP003548.1-202ENST00000522767 OVOS2Q6IE36 1432 aa13.83□□□□□ -0.2
AP003548.1-202ENST00000522767 COL3A1P02461 1466 aaPredicted RBP13.83□□□□□ -0.2
AP003548.1-202ENST00000522767 APAF1O14727 1248 aa13.83□□□□□ -0.2
AP003548.1-202ENST00000522767 TMEM94Q12767 1356 aa13.83□□□□□ -0.2
AP003548.1-202ENST00000522767 USP31Q70CQ4 1352 aa13.83□□□□□ -0.2
AP003548.1-202ENST00000522767 CDK12Q9NYV4 1490 aaPredicted RBP13.82□□□□□ -0.2
AP003548.1-202ENST00000522767 PAK3O75914 559 aaPredicted RBP13.82□□□□□ -0.2
AP003548.1-202ENST00000522767 NEFMP07197 916 aa13.82□□□□□ -0.2
AP003548.1-202ENST00000522767 PSME1Q06323 249 aa13.82□□□□□ -0.2
AP003548.1-202ENST00000522767 DCCP43146 1447 aa13.81□□□□□ -0.2
AP003548.1-202ENST00000522767 STRCQ7RTU9 1775 aa13.81□□□□□ -0.2
AP003548.1-202ENST00000522767 GOLGA2Q08379 1002 aa13.81□□□□□ -0.2
AP003548.1-202ENST00000522767 DMRT2Q9Y5R5 561 aa13.81□□□□□ -0.2
AP003548.1-202ENST00000522767 EMILIN1Q9Y6C2 1016 aa13.81□□□□□ -0.2
AP003548.1-202ENST00000522767 NLRP6P59044 892 aa13.8□□□□□ -0.2
AP003548.1-202ENST00000522767 NCBP3Q53F19 620 aaKnown RBP13.8□□□□□ -0.2
AP003548.1-202ENST00000522767 CADPS2Q86UW7 1296 aa13.8□□□□□ -0.2
AP003548.1-202ENST00000522767 ABTB2Q8N961 1025 aa13.8□□□□□ -0.2
AP003548.1-202ENST00000522767 MAPK8IP3Q9UPT6 1336 aa13.8□□□□□ -0.2
AP003548.1-202ENST00000522767 MSH6P52701 1360 aa13.8□□□□□ -0.2
AP003548.1-202ENST00000522767 STRCP1A6NGW2 1772 aa13.79□□□□□ -0.2
AP003548.1-202ENST00000522767 FCHSD2O94868 740 aa13.79□□□□□ -0.2
AP003548.1-202ENST00000522767 FBLN1P23142 703 aa13.79□□□□□ -0.2
AP003548.1-202ENST00000522767 FKBP8Q14318 412 aa13.79□□□□□ -0.2
AP003548.1-202ENST00000522767 RRS1Q15050 365 aaKnown RBP13.79□□□□□ -0.2
AP003548.1-202ENST00000522767 TCP11L2Q8N4U5 519 aa13.79□□□□□ -0.2
AP003548.1-202ENST00000522767 KIF1AQ12756 1690 aa13.79□□□□□ -0.2
AP003548.1-202ENST00000522767 ZNF521Q96K83 1311 aa13.78□□□□□ -0.2
AP003548.1-202ENST00000522767 C1orf167Q5SNV9 1468 aa13.78□□□□□ -0.2
AP003548.1-202ENST00000522767 PIK3C2AO00443 1686 aa13.77□□□□□ -0.21
AP003548.1-202ENST00000522767 CDCA7LQ96GN5 454 aa13.77□□□□□ -0.21
AP003548.1-202ENST00000522767 ORAI2Q96SN7 254 aa13.77□□□□□ -0.21
AP003548.1-202ENST00000522767 USP54Q70EL1 1684 aa13.76□□□□□ -0.21
AP003548.1-202ENST00000522767 LRRC7Q96NW7 1537 aa13.76□□□□□ -0.21
AP003548.1-202ENST00000522767 SOX12O15370 315 aa13.76□□□□□ -0.21
AP003548.1-202ENST00000522767 IL13P35225 146 aa13.76□□□□□ -0.21
AP003548.1-202ENST00000522767 CCDC27Q2M243 656 aa13.76□□□□□ -0.21
AP003548.1-202ENST00000522767 IQSEC2Q5JU85 1478 aa13.75□□□□□ -0.21
AP003548.1-202ENST00000522767 E9PSI1 815 aa13.75□□□□□ -0.21
AP003548.1-202ENST00000522767 FOXO3O43524 673 aa13.75□□□□□ -0.21
AP003548.1-202ENST00000522767 AMPHP49418 695 aa13.75□□□□□ -0.21
AP003548.1-202ENST00000522767 NEUROD2Q15784 382 aa13.75□□□□□ -0.21
AP003548.1-202ENST00000522767 RCAN3Q9UKA8 241 aa13.75□□□□□ -0.21
AP003548.1-202ENST00000522767 MST1RQ04912 1400 aa13.74□□□□□ -0.21
AP003548.1-202ENST00000522767 SBNO1A3KN83 1393 aa13.74□□□□□ -0.21
AP003548.1-202ENST00000522767 KIF24Q5T7B8 1368 aa13.74□□□□□ -0.21
AP003548.1-202ENST00000522767 SLFN5Q08AF3 891 aa13.74□□□□□ -0.21
AP003548.1-202ENST00000522767 NUTM2GQ5VZR2 741 aa13.74□□□□□ -0.21
AP003548.1-202ENST00000522767 ERICH6BQ5W0A0 696 aa13.74□□□□□ -0.21
AP003548.1-202ENST00000522767 KRT28Q7Z3Y7 464 aa13.74□□□□□ -0.21
AP003548.1-202ENST00000522767 WDR63Q8IWG1 891 aa13.74□□□□□ -0.21
AP003548.1-202ENST00000522767 WWC1Q8IX03 1113 aa13.74□□□□□ -0.21
AP003548.1-202ENST00000522767 PLEKHF1Q96S99 279 aa13.74□□□□□ -0.21
AP003548.1-202ENST00000522767 FLT4P35916 1363 aa13.73□□□□□ -0.21
AP003548.1-202ENST00000522767 MAP3K19Q56UN5 1328 aa13.73□□□□□ -0.21
AP003548.1-202ENST00000522767 KCNH5Q8NCM2 988 aa13.73□□□□□ -0.21
AP003548.1-202ENST00000522767 RSPH6AQ9H0K4 717 aa13.73□□□□□ -0.21
AP003548.1-202ENST00000522767 RRP7AQ9Y3A4 280 aaKnown RBP13.73□□□□□ -0.21
AP003548.1-202ENST00000522767 ZNF335Q9H4Z2 1342 aaPredicted RBP13.72□□□□□ -0.21
AP003548.1-202ENST00000522767 PRKAR2BP31323 418 aa13.72□□□□□ -0.21
AP003548.1-202ENST00000522767 TMPOP42166 694 aaKnown RBP13.72□□□□□ -0.21
AP003548.1-202ENST00000522767 HMOX1P09601 288 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms