RNA–Protein interactions for RNA: ENST00000522672.5

MSR1-214, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 3

Gene MSR1, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-214ENST00000522672 CABLES1Q8TDN4 633 aa13.73□□□□□ -0.21
MSR1-214ENST00000522672 EP400Q96L91 3159 aa13.73□□□□□ -0.21
MSR1-214ENST00000522672 PRR36Q9H6K5 1346 aa13.72□□□□□ -0.21
MSR1-214ENST00000522672 ACIN1Q9UKV3 1341 aaKnown RBP13.72□□□□□ -0.21
MSR1-214ENST00000522672 KRT28Q7Z3Y7 464 aa13.72□□□□□ -0.21
MSR1-214ENST00000522672 USP21Q9UK80 565 aa13.72□□□□□ -0.21
MSR1-214ENST00000522672 PHF8Q9UPP1 1060 aa13.72□□□□□ -0.21
MSR1-214ENST00000522672 TRPM3Q9HCF6 1732 aaPredicted RBP13.72□□□□□ -0.21
MSR1-214ENST00000522672 SIRT1Q96EB6 747 aa13.71□□□□□ -0.21
MSR1-214ENST00000522672 SPATA31A3Q5VYP0 1347 aa13.7□□□□□ -0.22
MSR1-214ENST00000522672 PLCH1Q4KWH8 1693 aa13.7□□□□□ -0.22
MSR1-214ENST00000522672 POTEIP0CG38 1075 aa13.7□□□□□ -0.22
MSR1-214ENST00000522672 HRCP23327 699 aa13.7□□□□□ -0.22
MSR1-214ENST00000522672 UPF1Q92900 1129 aaKnown RBP eCLIP13.7□□□□□ -0.22
MSR1-214ENST00000522672 LMOD2Q6P5Q4 547 aa13.69□□□□□ -0.22
MSR1-214ENST00000522672 TNS3Q68CZ2 1445 aa13.69□□□□□ -0.22
MSR1-214ENST00000522672 BCL9LQ86UU0 1499 aa13.68□□□□□ -0.22
MSR1-214ENST00000522672 CDK12Q9NYV4 1490 aaPredicted RBP13.68□□□□□ -0.22
MSR1-214ENST00000522672 ATRNO75882 1429 aa13.68□□□□□ -0.22
MSR1-214ENST00000522672 PRR29P0C7W0 189 aa13.68□□□□□ -0.22
MSR1-214ENST00000522672 RBM6P78332 1123 aaKnown RBP13.68□□□□□ -0.22
MSR1-214ENST00000522672 NBPF1Q3BBV0 1214 aa13.68□□□□□ -0.22
MSR1-214ENST00000522672 SIN3AQ96ST3 1273 aa13.68□□□□□ -0.22
MSR1-214ENST00000522672 SSUH2Q9Y2M2 353 aa13.68□□□□□ -0.22
MSR1-214ENST00000522672 BRWD3Q6RI45 1802 aa13.68□□□□□ -0.22
MSR1-214ENST00000522672 ALS2Q96Q42 1657 aa13.68□□□□□ -0.22
MSR1-214ENST00000522672 KIAA1210Q9ULL0 1709 aa13.67□□□□□ -0.22
MSR1-214ENST00000522672 FNBP4Q8N3X1 1017 aaPredicted RBP13.67□□□□□ -0.22
MSR1-214ENST00000522672 TULP4Q9NRJ4 1543 aa13.67□□□□□ -0.22
MSR1-214ENST00000522672 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.67□□□□□ -0.22
MSR1-214ENST00000522672 GLI3P10071 1580 aa13.66□□□□□ -0.22
MSR1-214ENST00000522672 CD44P16070 742 aaKnown RBP13.66□□□□□ -0.22
MSR1-214ENST00000522672 ITSN1Q15811 1721 aa13.66□□□□□ -0.22
MSR1-214ENST00000522672 CRYBG1Q9Y4K1 1723 aa13.66□□□□□ -0.22
MSR1-214ENST00000522672 ANKARQ7Z5J8 1434 aa13.65□□□□□ -0.22
MSR1-214ENST00000522672 WASLO00401 505 aaPredicted RBP13.65□□□□□ -0.22
MSR1-214ENST00000522672 PSME1Q06323 249 aa13.65□□□□□ -0.22
MSR1-214ENST00000522672 TRPC5Q9UL62 973 aaPredicted RBP13.65□□□□□ -0.22
MSR1-214ENST00000522672 ATP7BP35670 1465 aa13.65□□□□□ -0.22
MSR1-214ENST00000522672 TOPAZ1Q8N9V7 1692 aa13.65□□□□□ -0.22
MSR1-214ENST00000522672 SLIT2O94813 1529 aa13.64□□□□□ -0.23
MSR1-214ENST00000522672 QRICH2Q9H0J4 1663 aa13.63□□□□□ -0.23
MSR1-214ENST00000522672 NRAPQ86VF7 1730 aa13.63□□□□□ -0.23
MSR1-214ENST00000522672 SBNO1A3KN83 1393 aa13.62□□□□□ -0.23
MSR1-214ENST00000522672 CLCN6P51797 869 aa13.62□□□□□ -0.23
MSR1-214ENST00000522672 HAP1P54257 671 aaPredicted RBP13.62□□□□□ -0.23
MSR1-214ENST00000522672 NEUROD1Q13562 356 aa13.62□□□□□ -0.23
MSR1-214ENST00000522672 L3MBTL2Q969R5 705 aa13.61□□□□□ -0.23
MSR1-214ENST00000522672 DCBLD2Q96PD2 775 aa13.61□□□□□ -0.23
MSR1-214ENST00000522672 NWD2Q9ULI1 1742 aa13.61□□□□□ -0.23
MSR1-214ENST00000522672 RALGAPBQ86X10 1494 aa13.61□□□□□ -0.23
MSR1-214ENST00000522672 TRPM1Q7Z4N2 1603 aa13.61□□□□□ -0.23
MSR1-214ENST00000522672 PAK3O75914 559 aaPredicted RBP13.6□□□□□ -0.23
MSR1-214ENST00000522672 NUTM2GQ5VZR2 741 aa13.6□□□□□ -0.23
MSR1-214ENST00000522672 NGDNQ8NEJ9 315 aaKnown RBP13.6□□□□□ -0.23
MSR1-214ENST00000522672 NUDT16Q96DE0 195 aaKnown RBP13.6□□□□□ -0.23
MSR1-214ENST00000522672 CDK19Q9BWU1 502 aa13.6□□□□□ -0.23
MSR1-214ENST00000522672 PHRF1Q9P1Y6 1649 aaKnown RBP13.6□□□□□ -0.23
MSR1-214ENST00000522672 UNC5CLQ8IV45 518 aa13.59□□□□□ -0.23
MSR1-214ENST00000522672 GJD4Q96KN9 370 aaPredicted RBP13.59□□□□□ -0.23
MSR1-214ENST00000522672 SRCAPQ6ZRS2 3230 aa13.58□□□□□ -0.23
MSR1-214ENST00000522672 FAM83GA6ND36 823 aa13.58□□□□□ -0.24
MSR1-214ENST00000522672 ARHGEF10O15013 1369 aa13.58□□□□□ -0.24
MSR1-214ENST00000522672 GPRASP1Q5JY77 1395 aa13.58□□□□□ -0.24
MSR1-214ENST00000522672 CABP2Q9NPB3 220 aa13.57□□□□□ -0.24
MSR1-214ENST00000522672 COL14A1Q05707 1796 aaKnown RBP13.56□□□□□ -0.24
MSR1-214ENST00000522672 MKRN4PQ13434 485 aaPredicted RBP13.56□□□□□ -0.24
MSR1-214ENST00000522672 STAC3Q96MF2 364 aa13.56□□□□□ -0.24
MSR1-214ENST00000522672 CCDC9Q9Y3X0 531 aaKnown RBP13.56□□□□□ -0.24
MSR1-214ENST00000522672 EIF3AQ14152 1382 aaKnown RBP13.56□□□□□ -0.24
MSR1-214ENST00000522672 ATAD2Q6PL18 1390 aa13.55□□□□□ -0.24
MSR1-214ENST00000522672 BTG4Q9NY30 223 aa13.54□□□□□ -0.24
MSR1-214ENST00000522672 ACEP12821 1306 aa13.54□□□□□ -0.24
MSR1-214ENST00000522672 CENPJQ9HC77 1338 aaPredicted RBP13.54□□□□□ -0.24
MSR1-214ENST00000522672 SRPK2P78362 688 aaKnown RBP13.53□□□□□ -0.24
MSR1-214ENST00000522672 CHRNA2Q15822 529 aa13.53□□□□□ -0.24
MSR1-214ENST00000522672 NBPF8Q3BBV2 869 aa13.53□□□□□ -0.24
MSR1-214ENST00000522672 PPIP5K1Q6PFW1 1433 aa13.53□□□□□ -0.24
MSR1-214ENST00000522672 NRKQ7Z2Y5 1582 aa13.53□□□□□ -0.24
MSR1-214ENST00000522672 ZC3H6P61129 1189 aaKnown RBP13.52□□□□□ -0.25
MSR1-214ENST00000522672 VPS72Q15906 364 aa13.52□□□□□ -0.25
MSR1-214ENST00000522672 SEPT12Q8IYM1 358 aa13.52□□□□□ -0.25
MSR1-214ENST00000522672 POLR3AO14802 1390 aaPredicted RBP13.51□□□□□ -0.25
MSR1-214ENST00000522672 KIAA0232Q92628 1395 aa13.51□□□□□ -0.25
MSR1-214ENST00000522672 FAM182BQ5T319 152 aa13.51□□□□□ -0.25
MSR1-214ENST00000522672 FARP1Q9Y4F1 1045 aaPredicted RBP13.51□□□□□ -0.25
MSR1-214ENST00000522672 A0A0G2JS52 829 aa13.5□□□□□ -0.25
MSR1-214ENST00000522672 MYT1Q01538 1121 aa13.5□□□□□ -0.25
MSR1-214ENST00000522672 FAM98CQ17RN3 349 aaKnown RBP13.5□□□□□ -0.25
MSR1-214ENST00000522672 CCDC61Q9Y6R9 512 aa13.5□□□□□ -0.25
MSR1-214ENST00000522672 ROCK2O75116 1388 aaKnown RBP13.49□□□□□ -0.25
MSR1-214ENST00000522672 PRDM11Q9NQV5 511 aa13.49□□□□□ -0.25
MSR1-214ENST00000522672 AKAP12Q02952 1782 aa13.48□□□□□ -0.25
MSR1-214ENST00000522672 PIK3C2AO00443 1686 aa13.48□□□□□ -0.25
MSR1-214ENST00000522672 PLEKHG3A1L390 1219 aa13.48□□□□□ -0.25
MSR1-214ENST00000522672 DEFB132Q7Z7B7 95 aa13.48□□□□□ -0.25
MSR1-214ENST00000522672 RGPD5Q99666 1765 aa13.48□□□□□ -0.25
MSR1-214ENST00000522672 STRN4Q9NRL3 753 aa13.47□□□□□ -0.25
MSR1-214ENST00000522672 CABP1Q9NZU7 370 aa13.47□□□□□ -0.25
MSR1-214ENST00000522672 LMO7Q8WWI1 1683 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms