RNA–Protein interactions for RNA: ENST00000522336.5

CPEB4-209, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 5 BASIC

Gene CPEB4, Length 1,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-209ENST00000522336 C19orf44Q9H6X5 657 aa11.35□□□□□ -0.59
CPEB4-209ENST00000522336 ZBED9Q6R2W3 1325 aa11.34□□□□□ -0.59
CPEB4-209ENST00000522336 TTC21AQ8NDW8 1320 aa11.34□□□□□ -0.59
CPEB4-209ENST00000522336 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.34□□□□□ -0.599e-8■■■■□ 22.3
CPEB4-209ENST00000522336 C14orf37Q86TY3 774 aa11.33□□□□□ -0.6
CPEB4-209ENST00000522336 DMRT2Q9Y5R5 561 aa11.33□□□□□ -0.6
CPEB4-209ENST00000522336 STRCP1A6NGW2 1772 aa11.33□□□□□ -0.6
CPEB4-209ENST00000522336 BLMP54132 1417 aaPredicted RBP11.33□□□□□ -0.6
CPEB4-209ENST00000522336 TMEM94Q12767 1356 aa11.33□□□□□ -0.6
CPEB4-209ENST00000522336 AATKQ6ZMQ8 1374 aa11.33□□□□□ -0.6
CPEB4-209ENST00000522336 MTHFSP49914 203 aa11.33□□□□□ -0.6
CPEB4-209ENST00000522336 WDR43Q15061 677 aaKnown RBP eCLIP11.33□□□□□ -0.6
CPEB4-209ENST00000522336 NGDNQ8NEJ9 315 aaKnown RBP11.33□□□□□ -0.6
CPEB4-209ENST00000522336 COG3Q96JB2 828 aa11.33□□□□□ -0.6
CPEB4-209ENST00000522336 CFAP53Q96M91 514 aa11.33□□□□□ -0.6
CPEB4-209ENST00000522336 PHF8Q9UPP1 1060 aa11.33□□□□□ -0.6
CPEB4-209ENST00000522336 TNNT2P45379 298 aaPredicted RBP11.32□□□□□ -0.6
CPEB4-209ENST00000522336 NME9Q86XW9 330 aa11.32□□□□□ -0.6
CPEB4-209ENST00000522336 PMFBP1Q8TBY8 1022 aa11.32□□□□□ -0.6
CPEB4-209ENST00000522336 RBM33Q96EV2 1170 aaKnown RBP11.32□□□□□ -0.6
CPEB4-209ENST00000522336 RGPD8O14715 1765 aaPredicted RBP11.32□□□□□ -0.6
CPEB4-209ENST00000522336 USP31Q70CQ4 1352 aa11.31□□□□□ -0.6
CPEB4-209ENST00000522336 ADAMTS8Q9UP79 889 aa11.31□□□□□ -0.6
CPEB4-209ENST00000522336 OVOS2A0A0J9YW53 1432 aa11.31□□□□□ -0.6
CPEB4-209ENST00000522336 OVOS2Q6IE36 1432 aa11.31□□□□□ -0.6
CPEB4-209ENST00000522336 PNPLA6Q8IY17 1366 aa11.3□□□□□ -0.6
CPEB4-209ENST00000522336 SMG6Q86US8 1419 aaKnown RBP11.3□□□□□ -0.6
CPEB4-209ENST00000522336 C1orf167Q5SNV9 1468 aa11.29□□□□□ -0.6
CPEB4-209ENST00000522336 COL3A1P02461 1466 aaPredicted RBP11.29□□□□□ -0.6
CPEB4-209ENST00000522336 ATF3P18847 181 aa11.28□□□□□ -0.6
CPEB4-209ENST00000522336 ESCO1Q5FWF5 840 aa11.28□□□□□ -0.6
CPEB4-209ENST00000522336 CADPS2Q86UW7 1296 aa11.28□□□□□ -0.6
CPEB4-209ENST00000522336 SHPRHQ149N8 1683 aa11.28□□□□□ -0.6
CPEB4-209ENST00000522336 LRRC7Q96NW7 1537 aa11.28□□□□□ -0.6
CPEB4-209ENST00000522336 MSH6P52701 1360 aa11.28□□□□□ -0.6
CPEB4-209ENST00000522336 MST1RQ04912 1400 aa11.28□□□□□ -0.6
CPEB4-209ENST00000522336 POLKQ9UBT6 870 aa11.28□□□□□ -0.6
CPEB4-209ENST00000522336 USP54Q70EL1 1684 aa11.28□□□□□ -0.6
CPEB4-209ENST00000522336 KIF1AQ12756 1690 aa11.27□□□□□ -0.61
CPEB4-209ENST00000522336 ZRANB1Q9UGI0 708 aa11.27□□□□□ -0.61
CPEB4-209ENST00000522336 ZNF335Q9H4Z2 1342 aaPredicted RBP11.26□□□□□ -0.61
CPEB4-209ENST00000522336 NGEFQ8N5V2 710 aa11.26□□□□□ -0.61
CPEB4-209ENST00000522336 NUDCQ9Y266 331 aa11.26□□□□□ -0.61
CPEB4-209ENST00000522336 CDK12Q9NYV4 1490 aaPredicted RBP11.26□□□□□ -0.61
CPEB4-209ENST00000522336 ORAI2Q96SN7 254 aa11.25□□□□□ -0.61
CPEB4-209ENST00000522336 PIK3C2AO00443 1686 aa11.25□□□□□ -0.61
CPEB4-209ENST00000522336 DIAPH1O60610 1272 aaKnown RBP11.24□□□□□ -0.61
CPEB4-209ENST00000522336 PDE3BQ13370 1112 aa11.24□□□□□ -0.61
CPEB4-209ENST00000522336 XIRP1Q702N8 1843 aaKnown RBP11.24□□□□□ -0.61
CPEB4-209ENST00000522336 MAP2P11137 1827 aaKnown RBP11.24□□□□□ -0.61
CPEB4-209ENST00000522336 PSME1Q06323 249 aa11.24□□□□□ -0.61
CPEB4-209ENST00000522336 NCBP3Q53F19 620 aaKnown RBP11.24□□□□□ -0.61
CPEB4-209ENST00000522336 EMILIN1Q9Y6C2 1016 aa11.24□□□□□ -0.61
CPEB4-209ENST00000522336 KIF24Q5T7B8 1368 aa11.23□□□□□ -0.61
CPEB4-209ENST00000522336 NLRP6P59044 892 aa11.23□□□□□ -0.61
CPEB4-209ENST00000522336 ABTB2Q8N961 1025 aa11.23□□□□□ -0.61
CPEB4-209ENST00000522336 FOXO3O43524 673 aa11.22□□□□□ -0.61
CPEB4-209ENST00000522336 FBLN1P23142 703 aa11.22□□□□□ -0.61
CPEB4-209ENST00000522336 RUNDC1Q96C34 613 aa11.22□□□□□ -0.61
CPEB4-209ENST00000522336 PAK3O75914 559 aaPredicted RBP11.21□□□□□ -0.61
CPEB4-209ENST00000522336 RRS1Q15050 365 aaKnown RBP11.21□□□□□ -0.61
CPEB4-209ENST00000522336 U2AF1L5P0DN76 240 aaPredicted RBP11.2□□□□□ -0.62
CPEB4-209ENST00000522336 IL13P35225 146 aa11.2□□□□□ -0.62
CPEB4-209ENST00000522336 U2AF1Q01081 240 aaKnown RBP eCLIP11.2□□□□□ -0.62
CPEB4-209ENST00000522336 KRT28Q7Z3Y7 464 aa11.2□□□□□ -0.62
CPEB4-209ENST00000522336 CERKQ8TCT0 537 aa11.2□□□□□ -0.62
CPEB4-209ENST00000522336 PNNQ9H307 717 aaKnown RBP11.2□□□□□ -0.62
CPEB4-209ENST00000522336 NPHP3Q7Z494 1330 aa11.2□□□□□ -0.62
CPEB4-209ENST00000522336 ZNF521Q96K83 1311 aa11.2□□□□□ -0.62
CPEB4-209ENST00000522336 TRPM3Q9HCF6 1732 aaPredicted RBP11.2□□□□□ -0.62
CPEB4-209ENST00000522336 MARF1Q9Y4F3 1742 aaKnown RBP11.2□□□□□ -0.62
CPEB4-209ENST00000522336 SBNO1A3KN83 1393 aa11.2□□□□□ -0.62
CPEB4-209ENST00000522336 PPM1GO15355 546 aaPredicted RBP11.2□□□□□ -0.62
CPEB4-209ENST00000522336 FCHSD2O94868 740 aa11.2□□□□□ -0.62
CPEB4-209ENST00000522336 CCDC146Q8IYE0 955 aa11.2□□□□□ -0.62
CPEB4-209ENST00000522336 FLT4P35916 1363 aa11.19□□□□□ -0.62
CPEB4-209ENST00000522336 IQSEC2Q5JU85 1478 aa11.19□□□□□ -0.62
CPEB4-209ENST00000522336 APAF1O14727 1248 aa11.19□□□□□ -0.62
CPEB4-209ENST00000522336 KCNH5Q8NCM2 988 aa11.19□□□□□ -0.62
CPEB4-209ENST00000522336 U2SURPO15042 1029 aaKnown RBP11.18□□□□□ -0.62
CPEB4-209ENST00000522336 PLEKHF1Q96S99 279 aa11.18□□□□□ -0.62
CPEB4-209ENST00000522336 SLAIN2Q9P270 581 aa11.18□□□□□ -0.62
CPEB4-209ENST00000522336 USP19O94966 1318 aa11.18□□□□□ -0.62
CPEB4-209ENST00000522336 MAP3K19Q56UN5 1328 aa11.18□□□□□ -0.62
CPEB4-209ENST00000522336 RTL1A6NKG5 1358 aa11.18□□□□□ -0.62
CPEB4-209ENST00000522336 SLIT3O75094 1523 aa11.17□□□□□ -0.62
CPEB4-209ENST00000522336 CCDC27Q2M243 656 aa11.17□□□□□ -0.62
CPEB4-209ENST00000522336 BRINP3Q76B58 766 aa11.17□□□□□ -0.62
CPEB4-209ENST00000522336 PEAK1Q9H792 1746 aa11.17□□□□□ -0.62
CPEB4-209ENST00000522336 NFAT5O94916 1531 aa11.17□□□□□ -0.62
CPEB4-209ENST00000522336 NUTM2GQ5VZR2 741 aa11.16□□□□□ -0.62
CPEB4-209ENST00000522336 TCP11L2Q8N4U5 519 aa11.16□□□□□ -0.62
CPEB4-209ENST00000522336 RSPH6AQ9H0K4 717 aa11.16□□□□□ -0.62
CPEB4-209ENST00000522336 SALL2Q9Y467 1007 aaPredicted RBP11.16□□□□□ -0.62
CPEB4-209ENST00000522336 GTF3C3Q9Y5Q9 886 aa11.16□□□□□ -0.62
CPEB4-209ENST00000522336 PXDNQ92626 1479 aa11.16□□□□□ -0.62
CPEB4-209ENST00000522336 LTBP4Q8N2S1 1624 aa11.16□□□□□ -0.62
CPEB4-209ENST00000522336 ALS2Q96Q42 1657 aa11.16□□□□□ -0.62
CPEB4-209ENST00000522336 AMPHP49418 695 aa11.16□□□□□ -0.62
CPEB4-209ENST00000522336 EIF4A2Q14240 407 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms