RNA–Protein interactions for RNA: ENST00000522328.1

SH2D4A-205, Transcript of SH2 domain containing 4A, humanhuman

TSL 2

Gene SH2D4A, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-205ENST00000522328 KIF1AQ12756 1690 aa10.14□□□□□ -0.79
SH2D4A-205ENST00000522328 YTHDC2Q9H6S0 1430 aaKnown RBP10.14□□□□□ -0.79
SH2D4A-205ENST00000522328 SRCAPQ6ZRS2 3230 aa10.13□□□□□ -0.79
SH2D4A-205ENST00000522328 WAPLQ7Z5K2 1190 aa10.13□□□□□ -0.79
SH2D4A-205ENST00000522328 CLEC11AQ9Y240 323 aa10.13□□□□□ -0.79
SH2D4A-205ENST00000522328 NRXN1Q9ULB1 1477 aa10.12□□□□□ -0.79
SH2D4A-205ENST00000522328 PRR29P0C7W0 189 aa10.12□□□□□ -0.79
SH2D4A-205ENST00000522328 TMEM132EQ6IEE7 984 aa10.12□□□□□ -0.79
SH2D4A-205ENST00000522328 C14orf93Q9H972 538 aaKnown RBP10.12□□□□□ -0.79
SH2D4A-205ENST00000522328 FMN2Q9NZ56 1722 aa10.12□□□□□ -0.79
SH2D4A-205ENST00000522328 DHX57Q6P158 1386 aaKnown RBP10.12□□□□□ -0.79
SH2D4A-205ENST00000522328 BCL9LQ86UU0 1499 aa10.11□□□□□ -0.79
SH2D4A-205ENST00000522328 SPATA31A3Q5VYP0 1347 aa10.11□□□□□ -0.79
SH2D4A-205ENST00000522328 MARF1Q9Y4F3 1742 aaKnown RBP10.11□□□□□ -0.79
SH2D4A-205ENST00000522328 PLEKHH1Q9ULM0 1364 aa10.11□□□□□ -0.79
SH2D4A-205ENST00000522328 NUTM2FA1L443 756 aa10.1□□□□□ -0.79
SH2D4A-205ENST00000522328 XPCQ01831 940 aaPredicted RBP10.1□□□□□ -0.79
SH2D4A-205ENST00000522328 CCDC125Q86Z20 511 aa10.1□□□□□ -0.79
SH2D4A-205ENST00000522328 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.1□□□□□ -0.79
SH2D4A-205ENST00000522328 SLIT2O94813 1529 aa10.09□□□□□ -0.79
SH2D4A-205ENST00000522328 PSME1Q06323 249 aa10.09□□□□□ -0.79
SH2D4A-205ENST00000522328 DCAF8Q5TAQ9 597 aa10.09□□□□□ -0.79
SH2D4A-205ENST00000522328 KRT28Q7Z3Y7 464 aa10.09□□□□□ -0.79
SH2D4A-205ENST00000522328 GJD4Q96KN9 370 aaPredicted RBP10.09□□□□□ -0.79
SH2D4A-205ENST00000522328 TSHZ2Q9NRE2 1034 aa10.09□□□□□ -0.79
SH2D4A-205ENST00000522328 TNS3Q68CZ2 1445 aa10.08□□□□□ -0.8
SH2D4A-205ENST00000522328 ANKARQ7Z5J8 1434 aa10.08□□□□□ -0.8
SH2D4A-205ENST00000522328 DLC1Q96QB1 1528 aa10.08□□□□□ -0.8
SH2D4A-205ENST00000522328 UNC5CLQ8IV45 518 aa10.08□□□□□ -0.8
SH2D4A-205ENST00000522328 PHF8Q9UPP1 1060 aa10.08□□□□□ -0.8
SH2D4A-205ENST00000522328 SBNO1A3KN83 1393 aa10.08□□□□□ -0.8
SH2D4A-205ENST00000522328 USP32Q8NFA0 1604 aa10.07□□□□□ -0.8
SH2D4A-205ENST00000522328 ARHGEF10O15013 1369 aa10.07□□□□□ -0.8
SH2D4A-205ENST00000522328 EIF3AQ14152 1382 aaKnown RBP10.07□□□□□ -0.8
SH2D4A-205ENST00000522328 CFAP70Q5T0N1 1121 aa10.07□□□□□ -0.8
SH2D4A-205ENST00000522328 FAM212AQ96EL1 285 aa10.07□□□□□ -0.8
SH2D4A-205ENST00000522328 STAC3Q96MF2 364 aa10.07□□□□□ -0.8
SH2D4A-205ENST00000522328 ADGRB2O60241 1585 aa10.06□□□□□ -0.8
SH2D4A-205ENST00000522328 RALGAPBQ86X10 1494 aa10.06□□□□□ -0.8
SH2D4A-205ENST00000522328 RIOK3O14730 519 aaKnown RBP10.06□□□□□ -0.8
SH2D4A-205ENST00000522328 PRAM1Q96QH2 718 aa10.06□□□□□ -0.8
SH2D4A-205ENST00000522328 RAB3GAP2Q9H2M9 1393 aa10.05□□□□□ -0.8
SH2D4A-205ENST00000522328 POGKQ9P215 609 aa10.05□□□□□ -0.8
SH2D4A-205ENST00000522328 ZRANB1Q9UGI0 708 aa10.05□□□□□ -0.8
SH2D4A-205ENST00000522328 GLI3P10071 1580 aa10.05□□□□□ -0.8
SH2D4A-205ENST00000522328 VPS72Q15906 364 aa10.04□□□□□ -0.8
SH2D4A-205ENST00000522328 RASEFQ8IZ41 740 aa10.04□□□□□ -0.8
SH2D4A-205ENST00000522328 BLMP54132 1417 aaPredicted RBP10.04□□□□□ -0.8
SH2D4A-205ENST00000522328 ADGRB1O14514 1584 aa10.04□□□□□ -0.8
SH2D4A-205ENST00000522328 NWD2Q9ULI1 1742 aa10.04□□□□□ -0.8
SH2D4A-205ENST00000522328 PITPNM1O00562 1244 aa10.03□□□□□ -0.8
SH2D4A-205ENST00000522328 CHRM1P11229 460 aaPredicted RBP10.03□□□□□ -0.8
SH2D4A-205ENST00000522328 TAOK2Q9UL54 1235 aa10.03□□□□□ -0.8
SH2D4A-205ENST00000522328 GPRASP1Q5JY77 1395 aa10.02□□□□□ -0.8
SH2D4A-205ENST00000522328 RGPD8O14715 1765 aaPredicted RBP10.02□□□□□ -0.81
SH2D4A-205ENST00000522328 ONECUT3O60422 494 aaPredicted RBP10.02□□□□□ -0.81
SH2D4A-205ENST00000522328 SAFB2Q14151 953 aaKnown RBP eCLIP10.02□□□□□ -0.81
SH2D4A-205ENST00000522328 TULP4Q9NRJ4 1543 aa10.02□□□□□ -0.81
SH2D4A-205ENST00000522328 ABCA3Q99758 1704 aa10.02□□□□□ -0.81
SH2D4A-205ENST00000522328 HRCP23327 699 aa10.01□□□□□ -0.81
SH2D4A-205ENST00000522328 NKX1-1Q15270 411 aaPredicted RBP10.01□□□□□ -0.81
SH2D4A-205ENST00000522328 LMOD2Q6P5Q4 547 aa10.01□□□□□ -0.81
SH2D4A-205ENST00000522328 SEPT12Q8IYM1 358 aa10.01□□□□□ -0.81
SH2D4A-205ENST00000522328 CABLES1Q8TDN4 633 aa10.01□□□□□ -0.81
SH2D4A-205ENST00000522328 PLCH1Q4KWH8 1693 aa10.01□□□□□ -0.81
SH2D4A-205ENST00000522328 SF3B2Q13435 895 aaKnown RBP10□□□□□ -0.81
SH2D4A-205ENST00000522328 PMFBP1Q8TBY8 1022 aa10□□□□□ -0.81
SH2D4A-205ENST00000522328 TRAK1Q9UPV9 953 aa10□□□□□ -0.81
SH2D4A-205ENST00000522328 CCDC9Q9Y3X0 531 aaKnown RBP10□□□□□ -0.81
SH2D4A-205ENST00000522328 TRPM3Q9HCF6 1732 aaPredicted RBP9.99□□□□□ -0.81
SH2D4A-205ENST00000522328 WASLO00401 505 aaPredicted RBP9.99□□□□□ -0.81
SH2D4A-205ENST00000522328 DCAF11Q8TEB1 546 aa9.99□□□□□ -0.81
SH2D4A-205ENST00000522328 FAM83GA6ND36 823 aa9.98□□□□□ -0.81
SH2D4A-205ENST00000522328 KRT27Q7Z3Y8 459 aa9.98□□□□□ -0.81
SH2D4A-205ENST00000522328 HIRIP3Q9BW71 556 aaPredicted RBP9.98□□□□□ -0.81
SH2D4A-205ENST00000522328 ALS2Q96Q42 1657 aa9.98□□□□□ -0.81
SH2D4A-205ENST00000522328 MINK1Q8N4C8 1332 aaPredicted RBP9.98□□□□□ -0.81
SH2D4A-205ENST00000522328 PRR36Q9H6K5 1346 aa9.98□□□□□ -0.81
SH2D4A-205ENST00000522328 COL14A1Q05707 1796 aaKnown RBP9.98□□□□□ -0.81
SH2D4A-205ENST00000522328 NGDNQ8NEJ9 315 aaKnown RBP9.97□□□□□ -0.81
SH2D4A-205ENST00000522328 SGIP1Q9BQI5 828 aa9.97□□□□□ -0.81
SH2D4A-205ENST00000522328 BRWD3Q6RI45 1802 aa9.97□□□□□ -0.81
SH2D4A-205ENST00000522328 ITSN1Q15811 1721 aa9.96□□□□□ -0.81
SH2D4A-205ENST00000522328 NRAPQ86VF7 1730 aa9.96□□□□□ -0.81
SH2D4A-205ENST00000522328 BTG4Q9NY30 223 aa9.96□□□□□ -0.82
SH2D4A-205ENST00000522328 ATP7BP35670 1465 aa9.96□□□□□ -0.82
SH2D4A-205ENST00000522328 A0A0G2JS52 829 aa9.95□□□□□ -0.82
SH2D4A-205ENST00000522328 STK25O00506 426 aa9.95□□□□□ -0.82
SH2D4A-205ENST00000522328 BAG6P46379 1132 aa9.95□□□□□ -0.82
SH2D4A-205ENST00000522328 MYT1Q01538 1121 aa9.95□□□□□ -0.82
SH2D4A-205ENST00000522328 ARHGEF28Q8N1W1 1705 aaKnown RBP9.95□□□□□ -0.82
SH2D4A-205ENST00000522328 SPATA31A5Q5VU36 1347 aa9.94□□□□□ -0.82
SH2D4A-205ENST00000522328 SPATA31A7Q8IWB4 1347 aa9.94□□□□□ -0.82
SH2D4A-205ENST00000522328 GTPBP6O43824 516 aaPredicted RBP9.94□□□□□ -0.82
SH2D4A-205ENST00000522328 PAK3O75914 559 aaPredicted RBP9.94□□□□□ -0.82
SH2D4A-205ENST00000522328 PRKCSHP14314 528 aaPredicted RBP9.94□□□□□ -0.82
SH2D4A-205ENST00000522328 FAM98CQ17RN3 349 aaKnown RBP9.94□□□□□ -0.82
SH2D4A-205ENST00000522328 DEFB132Q7Z7B7 95 aa9.94□□□□□ -0.82
SH2D4A-205ENST00000522328 NUDT16Q96DE0 195 aaKnown RBP9.94□□□□□ -0.82
SH2D4A-205ENST00000522328 PRDM11Q9NQV5 511 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms