RNA–Protein interactions for RNA: ENST00000522326.1

EFCAB13-210, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 4

Gene EFCAB13, Length 541 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-210ENST00000522326 ZNF511Q8NB15 262 aa11.9□□□□□ -0.5
EFCAB13-210ENST00000522326 TSC1Q92574 1164 aa11.9□□□□□ -0.5
EFCAB13-210ENST00000522326 AAASQ9NRG9 546 aa11.9□□□□□ -0.5
EFCAB13-210ENST00000522326 POLR3EQ9NVU0 708 aa11.9□□□□□ -0.5
EFCAB13-210ENST00000522326 AXIN1O15169 862 aa11.89□□□□□ -0.51
EFCAB13-210ENST00000522326 BAP1Q92560 729 aa11.88□□□□□ -0.51
EFCAB13-210ENST00000522326 FAM117AQ9C073 453 aa11.88□□□□□ -0.51
EFCAB13-210ENST00000522326 VARSP26640 1264 aaKnown RBP11.87□□□□□ -0.51
EFCAB13-210ENST00000522326 ARMC2Q8NEN0 867 aa11.87□□□□□ -0.51
EFCAB13-210ENST00000522326 ST8SIA5O15466 376 aa11.86□□□□□ -0.51
EFCAB13-210ENST00000522326 LINC01559Q495D7 138 aa11.86□□□□□ -0.51
EFCAB13-210ENST00000522326 MAP10Q9P2G4 905 aa11.86□□□□□ -0.51
EFCAB13-210ENST00000522326 J3QL48 77 aa11.85□□□□□ -0.51
EFCAB13-210ENST00000522326 SIAH2O43255 324 aa11.85□□□□□ -0.51
EFCAB13-210ENST00000522326 ALDH1A1P00352 501 aa11.85□□□□□ -0.51
EFCAB13-210ENST00000522326 RTL5Q5HYW3 569 aaPredicted RBP11.85□□□□□ -0.51
EFCAB13-210ENST00000522326 MPNDQ8N594 471 aa11.85□□□□□ -0.51
EFCAB13-210ENST00000522326 PER1O15534 1290 aaPredicted RBP11.84□□□□□ -0.51
EFCAB13-210ENST00000522326 PLEKHG3A1L390 1219 aa11.83□□□□□ -0.52
EFCAB13-210ENST00000522326 NBPF14Q5TI25 921 aa11.83□□□□□ -0.52
EFCAB13-210ENST00000522326 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.83□□□□□ -0.52
EFCAB13-210ENST00000522326 WASF2Q9Y6W5 498 aa11.83□□□□□ -0.52
EFCAB13-210ENST00000522326 PPP2R2DQ66LE6 453 aa11.82□□□□□ -0.52
EFCAB13-210ENST00000522326 GOPCQ9HD26 462 aa11.82□□□□□ -0.52
EFCAB13-210ENST00000522326 FAM174AQ8TBP5 190 aa11.81□□□□□ -0.52
EFCAB13-210ENST00000522326 NEUROD2Q15784 382 aa11.8□□□□□ -0.52
EFCAB13-210ENST00000522326 BPHLQ86WA6 291 aaPredicted RBP11.8□□□□□ -0.52
EFCAB13-210ENST00000522326 GPKOWQ92917 476 aaPredicted RBP eCLIP11.8□□□□□ -0.52
EFCAB13-210ENST00000522326 ATP1B4Q9UN42 357 aaPredicted RBP11.8□□□□□ -0.52
EFCAB13-210ENST00000522326 HPS1Q92902 700 aa11.78□□□□□ -0.52
EFCAB13-210ENST00000522326 AGERQ15109 404 aa11.76□□□□□ -0.53
EFCAB13-210ENST00000522326 PROCA1Q8NCQ7 364 aaPredicted RBP11.76□□□□□ -0.53
EFCAB13-210ENST00000522326 TLL2Q9Y6L7 1015 aa11.76□□□□□ -0.53
EFCAB13-210ENST00000522326 CTDSPL2Q05D32 466 aa11.74□□□□□ -0.53
EFCAB13-210ENST00000522326 FOXJ1Q92949 421 aa11.74□□□□□ -0.53
EFCAB13-210ENST00000522326 PCMTD1Q96MG8 357 aaPredicted RBP11.74□□□□□ -0.53
EFCAB13-210ENST00000522326 CDK15Q96Q40 435 aa11.74□□□□□ -0.53
EFCAB13-210ENST00000522326 SENP2Q9HC62 589 aa11.74□□□□□ -0.53
EFCAB13-210ENST00000522326 ATP13A2Q9NQ11 1180 aa11.74□□□□□ -0.53
EFCAB13-210ENST00000522326 ZC3H4Q9UPT8 1303 aaKnown RBP11.73□□□□□ -0.53
EFCAB13-210ENST00000522326 ADH1CP00326 375 aa11.72□□□□□ -0.53
EFCAB13-210ENST00000522326 PNMA1Q8ND90 353 aa11.72□□□□□ -0.53
EFCAB13-210ENST00000522326 DACH1Q9UI36 760 aa11.72□□□□□ -0.53
EFCAB13-210ENST00000522326 POTECB2RU33 542 aa11.71□□□□□ -0.53
EFCAB13-210ENST00000522326 SH3RF1Q7Z6J0 888 aa11.71□□□□□ -0.53
EFCAB13-210ENST00000522326 KIFC2Q96AC6 838 aa11.71□□□□□ -0.53
EFCAB13-210ENST00000522326 GMPR2Q9P2T1 348 aaKnown RBP11.71□□□□□ -0.53
EFCAB13-210ENST00000522326 C11orf95C9JLR9 678 aaPredicted RBP11.7□□□□□ -0.54
EFCAB13-210ENST00000522326 BRPF1P55201 1214 aaPredicted RBP11.7□□□□□ -0.54
EFCAB13-210ENST00000522326 NNTQ13423 1086 aa11.7□□□□□ -0.54
EFCAB13-210ENST00000522326 TPRNQ4KMQ1 711 aa11.7□□□□□ -0.54
EFCAB13-210ENST00000522326 SH3BP5LQ7L8J4 393 aa11.7□□□□□ -0.54
EFCAB13-210ENST00000522326 C1QTNF2Q9BXJ5 285 aa11.7□□□□□ -0.54
EFCAB13-210ENST00000522326 CAPN5O15484 640 aaPredicted RBP11.69□□□□□ -0.54
EFCAB13-210ENST00000522326 AP1G2O75843 785 aa11.69□□□□□ -0.54
EFCAB13-210ENST00000522326 NR5A1Q13285 461 aa11.69□□□□□ -0.54
EFCAB13-210ENST00000522326 FKBPLQ9UIM3 349 aa11.69□□□□□ -0.54
EFCAB13-210ENST00000522326 C4orf48Q5BLP8 95 aa11.68□□□□□ -0.54
EFCAB13-210ENST00000522326 PDXDC2PQ6P474 469 aa11.68□□□□□ -0.54
EFCAB13-210ENST00000522326 TRMT44Q8IYL2 757 aaKnown RBP11.68□□□□□ -0.54
EFCAB13-210ENST00000522326 MAP4K5Q9Y4K4 846 aa11.68□□□□□ -0.54
EFCAB13-210ENST00000522326 RFC5P40937 340 aa11.67□□□□□ -0.54
EFCAB13-210ENST00000522326 LRRN4Q8WUT4 740 aa11.67□□□□□ -0.54
EFCAB13-210ENST00000522326 ZNF775Q96BV0 537 aaPredicted RBP11.67□□□□□ -0.54
EFCAB13-210ENST00000522326 TRIM47Q96LD4 638 aa11.67□□□□□ -0.54
EFCAB13-210ENST00000522326 ARID5BQ14865 1188 aa11.66□□□□□ -0.54
EFCAB13-210ENST00000522326 TMEM259Q4ZIN3 620 aa11.66□□□□□ -0.54
EFCAB13-210ENST00000522326 FBXO31Q5XUX0 539 aaPredicted RBP11.66□□□□□ -0.54
EFCAB13-210ENST00000522326 USP17L8P0C7I0 530 aa11.65□□□□□ -0.54
EFCAB13-210ENST00000522326 IL27Q8NEV9 243 aa11.65□□□□□ -0.54
EFCAB13-210ENST00000522326 GPSM3Q9Y4H4 160 aa11.65□□□□□ -0.54
EFCAB13-210ENST00000522326 MAGEB6P1A0A0J9YX57 407 aa11.64□□□□□ -0.55
EFCAB13-210ENST00000522326 CDV3Q9UKY7 258 aaKnown RBP11.64□□□□□ -0.55
EFCAB13-210ENST00000522326 NR6A1Q15406 480 aa11.63□□□□□ -0.55
EFCAB13-210ENST00000522326 ARHGAP9Q9BRR9 750 aa11.63□□□□□ -0.55
EFCAB13-210ENST00000522326 TIMP2P16035 220 aa11.61□□□□□ -0.55
EFCAB13-210ENST00000522326 WDR4P57081 412 aaKnown RBP11.61□□□□□ -0.55
EFCAB13-210ENST00000522326 PTK2Q05397 1052 aa11.61□□□□□ -0.55
EFCAB13-210ENST00000522326 VASH1Q7L8A9 365 aaPredicted RBP11.61□□□□□ -0.55
EFCAB13-210ENST00000522326 CARD14Q9BXL6 1004 aa11.61□□□□□ -0.55
EFCAB13-210ENST00000522326 GRM5P41594 1212 aa11.6□□□□□ -0.55
EFCAB13-210ENST00000522326 ERFEQ4G0M1 354 aa11.6□□□□□ -0.55
EFCAB13-210ENST00000522326 FSHRP23945 695 aa11.59□□□□□ -0.55
EFCAB13-210ENST00000522326 SLC10A4Q96EP9 437 aa11.59□□□□□ -0.55
EFCAB13-210ENST00000522326 KLF16Q9BXK1 252 aaPredicted RBP11.59□□□□□ -0.55
EFCAB13-210ENST00000522326 BMP1P13497 986 aa11.58□□□□□ -0.56
EFCAB13-210ENST00000522326 TRIM46Q7Z4K8 759 aa11.58□□□□□ -0.56
EFCAB13-210ENST00000522326 ZBTB33Q86T24 672 aa11.58□□□□□ -0.56
EFCAB13-210ENST00000522326 SCARF1Q14162 830 aa11.57□□□□□ -0.56
EFCAB13-210ENST00000522326 SOCS7O14512 581 aa11.56□□□□□ -0.56
EFCAB13-210ENST00000522326 ZIC2O95409 532 aaPredicted RBP11.56□□□□□ -0.56
EFCAB13-210ENST00000522326 NR3C2P08235 984 aa11.56□□□□□ -0.56
EFCAB13-210ENST00000522326 SNRPBP14678 240 aaKnown RBP11.56□□□□□ -0.56
EFCAB13-210ENST00000522326 HMX1Q9NP08 348 aaPredicted RBP11.56□□□□□ -0.56
EFCAB13-210ENST00000522326 EMILIN1Q9Y6C2 1016 aa11.56□□□□□ -0.56
EFCAB13-210ENST00000522326 MRPL14Q6P1L8 145 aaKnown RBP11.55□□□□□ -0.56
EFCAB13-210ENST00000522326 CCDC116Q8IYX3 515 aa11.55□□□□□ -0.56
EFCAB13-210ENST00000522326 ITPKCQ96DU7 683 aa11.54□□□□□ -0.56
EFCAB13-210ENST00000522326 APBB1O00213 710 aa11.53□□□□□ -0.56
EFCAB13-210ENST00000522326 NBPF20Q3BBV1 942 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms