RNA–Protein interactions for RNA: ENST00000522246.5

CD74-208, Transcript of CD74 molecule, humanhuman

TSL 4

Gene CD74, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-208ENST00000522246 PPP2R1AP30153 589 aa14.3□□□□□ -0.12
CD74-208ENST00000522246 COG3Q96JB2 828 aa14.3□□□□□ -0.12
CD74-208ENST00000522246 ORAI2Q96SN7 254 aa14.3□□□□□ -0.12
CD74-208ENST00000522246 MRS2Q9HD23 443 aa14.3□□□□□ -0.12
CD74-208ENST00000522246 SCAF1Q9H7N4 1312 aaKnown RBP14.3□□□□□ -0.12
CD74-208ENST00000522246 SSH2Q76I76 1423 aa14.3□□□□□ -0.12
CD74-208ENST00000522246 GGNBP2Q9H3C7 697 aa14.29□□□□□ -0.12
CD74-208ENST00000522246 KIF1AQ12756 1690 aa14.29□□□□□ -0.12
CD74-208ENST00000522246 LTBP4Q8N2S1 1624 aa14.28□□□□□ -0.12
CD74-208ENST00000522246 NPHP3Q7Z494 1330 aa14.27□□□□□ -0.12
CD74-208ENST00000522246 FOXO3O43524 673 aa14.27□□□□□ -0.13
CD74-208ENST00000522246 KRT28Q7Z3Y7 464 aa14.27□□□□□ -0.13
CD74-208ENST00000522246 NME9Q86XW9 330 aa14.27□□□□□ -0.13
CD74-208ENST00000522246 KIF20BQ96Q89 1820 aa14.27□□□□□ -0.13
CD74-208ENST00000522246 USP31Q70CQ4 1352 aa14.26□□□□□ -0.13
CD74-208ENST00000522246 PAK3O75914 559 aaPredicted RBP14.26□□□□□ -0.13
CD74-208ENST00000522246 ANKRD26Q9UPS8 1709 aa14.25□□□□□ -0.13
CD74-208ENST00000522246 ABTB2Q8N961 1025 aa14.25□□□□□ -0.13
CD74-208ENST00000522246 CFAP53Q96M91 514 aa14.25□□□□□ -0.13
CD74-208ENST00000522246 NLRP6P59044 892 aa14.24□□□□□ -0.13
CD74-208ENST00000522246 AATKQ6ZMQ8 1374 aa14.23□□□□□ -0.13
CD74-208ENST00000522246 TOM1O60784 492 aa14.23□□□□□ -0.13
CD74-208ENST00000522246 TNNT2P45379 298 aaPredicted RBP14.23□□□□□ -0.13
CD74-208ENST00000522246 BRINP3Q76B58 766 aa14.23□□□□□ -0.13
CD74-208ENST00000522246 PNISRQ8TF01 805 aaKnown RBP14.23□□□□□ -0.13
CD74-208ENST00000522246 SBNO1A3KN83 1393 aa14.22□□□□□ -0.13
CD74-208ENST00000522246 NRKQ7Z2Y5 1582 aa14.22□□□□□ -0.13
CD74-208ENST00000522246 MTHFSP49914 203 aa14.22□□□□□ -0.13
CD74-208ENST00000522246 IQSEC2Q5JU85 1478 aa14.21□□□□□ -0.13
CD74-208ENST00000522246 CCDC184Q52MB2 194 aa14.21□□□□□ -0.13
CD74-208ENST00000522246 KCNH5Q8NCM2 988 aa14.2□□□□□ -0.14
CD74-208ENST00000522246 ZRANB1Q9UGI0 708 aa14.2□□□□□ -0.14
CD74-208ENST00000522246 OVOS2A0A0J9YW53 1432 aa14.2□□□□□ -0.14
CD74-208ENST00000522246 OVOS2Q6IE36 1432 aa14.2□□□□□ -0.14
CD74-208ENST00000522246 FAM9BQ8IZU0 186 aa14.19□□□□□ -0.14
CD74-208ENST00000522246 POLKQ9UBT6 870 aa14.19□□□□□ -0.14
CD74-208ENST00000522246 NUDCQ9Y266 331 aa14.19□□□□□ -0.14
CD74-208ENST00000522246 INSRP06213 1382 aa14.19□□□□□ -0.14
CD74-208ENST00000522246 SOS2Q07890 1332 aaPredicted RBP14.18□□□□□ -0.14
CD74-208ENST00000522246 WDR43Q15061 677 aaKnown RBP eCLIP14.18□□□□□ -0.14
CD74-208ENST00000522246 LMOD2Q6P5Q4 547 aa14.17□□□□□ -0.14
CD74-208ENST00000522246 ARHGEF10O15013 1369 aa14.17□□□□□ -0.14
CD74-208ENST00000522246 MAP2P11137 1827 aaKnown RBP14.17□□□□□ -0.14
CD74-208ENST00000522246 USP54Q70EL1 1684 aa14.17□□□□□ -0.14
CD74-208ENST00000522246 SPATA31A3Q5VYP0 1347 aa14.16□□□□□ -0.14
CD74-208ENST00000522246 XPCQ01831 940 aaPredicted RBP14.16□□□□□ -0.14
CD74-208ENST00000522246 KIF24Q5T7B8 1368 aa14.16□□□□□ -0.14
CD74-208ENST00000522246 PNPLA6Q8IY17 1366 aa14.16□□□□□ -0.14
CD74-208ENST00000522246 PIK3C2AO00443 1686 aa14.15□□□□□ -0.14
CD74-208ENST00000522246 NUTM2GQ5VZR2 741 aa14.15□□□□□ -0.14
CD74-208ENST00000522246 CERKQ8TCT0 537 aa14.15□□□□□ -0.14
CD74-208ENST00000522246 TRPM3Q9HCF6 1732 aaPredicted RBP14.15□□□□□ -0.14
CD74-208ENST00000522246 PXDNQ92626 1479 aa14.14□□□□□ -0.15
CD74-208ENST00000522246 DIAPH1O60610 1272 aaKnown RBP14.14□□□□□ -0.15
CD74-208ENST00000522246 LRRC59Q96AG4 307 aaKnown RBP14.14□□□□□ -0.15
CD74-208ENST00000522246 PNNQ9H307 717 aaKnown RBP14.14□□□□□ -0.15
CD74-208ENST00000522246 TNS3Q68CZ2 1445 aa14.14□□□□□ -0.15
CD74-208ENST00000522246 SMG6Q86US8 1419 aaKnown RBP14.14□□□□□ -0.15
CD74-208ENST00000522246 UBAP1LF5GYI3 381 aa14.13□□□□□ -0.15
CD74-208ENST00000522246 PPM1GO15355 546 aaPredicted RBP14.13□□□□□ -0.15
CD74-208ENST00000522246 GCP02774 474 aa14.13□□□□□ -0.15
CD74-208ENST00000522246 AMPHP49418 695 aa14.13□□□□□ -0.15
CD74-208ENST00000522246 DDX17Q92841 729 aaKnown RBP14.13□□□□□ -0.15
CD74-208ENST00000522246 USP19O94966 1318 aa14.13□□□□□ -0.15
CD74-208ENST00000522246 RRS1Q15050 365 aaKnown RBP14.12□□□□□ -0.15
CD74-208ENST00000522246 ADAMTS8Q9UP79 889 aa14.12□□□□□ -0.15
CD74-208ENST00000522246 EMILIN1Q9Y6C2 1016 aa14.12□□□□□ -0.15
CD74-208ENST00000522246 ALS2Q96Q42 1657 aa14.11□□□□□ -0.15
CD74-208ENST00000522246 FBLN1P23142 703 aa14.11□□□□□ -0.15
CD74-208ENST00000522246 YTHDC1Q96MU7 727 aaKnown RBP14.11□□□□□ -0.15
CD74-208ENST00000522246 CDK12Q9NYV4 1490 aaPredicted RBP14.11□□□□□ -0.15
CD74-208ENST00000522246 MAP3K19Q56UN5 1328 aa14.11□□□□□ -0.15
CD74-208ENST00000522246 FLT4P35916 1363 aa14.1□□□□□ -0.15
CD74-208ENST00000522246 SOX12O15370 315 aa14.1□□□□□ -0.15
CD74-208ENST00000522246 NGEFQ8N5V2 710 aa14.1□□□□□ -0.15
CD74-208ENST00000522246 NHSL1Q5SYE7 1610 aa14.1□□□□□ -0.15
CD74-208ENST00000522246 RTL1A6NKG5 1358 aa14.09□□□□□ -0.15
CD74-208ENST00000522246 IP6K1Q92551 441 aa14.09□□□□□ -0.15
CD74-208ENST00000522246 ROBO1Q9Y6N7 1651 aa14.09□□□□□ -0.15
CD74-208ENST00000522246 SLIT3O75094 1523 aa14.09□□□□□ -0.15
CD74-208ENST00000522246 AHDC1Q5TGY3 1603 aaPredicted RBP14.08□□□□□ -0.15
CD74-208ENST00000522246 CENPBP07199 599 aaPredicted RBP14.08□□□□□ -0.16
CD74-208ENST00000522246 U2AF1L5P0DN76 240 aaPredicted RBP14.08□□□□□ -0.16
CD74-208ENST00000522246 HNRNPUQ00839 825 aaKnown RBP eCLIP14.08□□□□□ -0.16
CD74-208ENST00000522246 U2AF1Q01081 240 aaKnown RBP eCLIP14.08□□□□□ -0.16
CD74-208ENST00000522246 ARHGEF25Q86VW2 580 aa14.08□□□□□ -0.16
CD74-208ENST00000522246 MARF1Q9Y4F3 1742 aaKnown RBP14.07□□□□□ -0.16
CD74-208ENST00000522246 U2SURPO15042 1029 aaKnown RBP14.07□□□□□ -0.16
CD74-208ENST00000522246 FCHSD2O94868 740 aa14.07□□□□□ -0.16
CD74-208ENST00000522246 IL13P35225 146 aa14.07□□□□□ -0.16
CD74-208ENST00000522246 PIP4K2BP78356 416 aa14.07□□□□□ -0.16
CD74-208ENST00000522246 COL3A1P02461 1466 aaPredicted RBP14.06□□□□□ -0.16
CD74-208ENST00000522246 NEFMP07197 916 aa14.06□□□□□ -0.16
CD74-208ENST00000522246 HOXC9P31274 260 aa14.06□□□□□ -0.16
CD74-208ENST00000522246 HSP90AB2PQ58FF8 381 aa14.06□□□□□ -0.16
CD74-208ENST00000522246 NFAT5O94916 1531 aa14.05□□□□□ -0.16
CD74-208ENST00000522246 HAP1P54257 671 aaPredicted RBP14.05□□□□□ -0.16
CD74-208ENST00000522246 NCBP3Q53F19 620 aaKnown RBP14.05□□□□□ -0.16
CD74-208ENST00000522246 RUNDC1Q96C34 613 aa14.05□□□□□ -0.16
CD74-208ENST00000522246 MED1Q15648 1581 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms