RNA–Protein interactions for RNA: ENST00000521843.6

GRIA1-213, Transcript of glutamate ionotropic receptor AMPA type subunit 1, humanhuman

TSL 2 BASIC

Gene GRIA1, Length 3,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1-213ENST00000521843 SMC4Q9NTJ3 1288 aa13.36□□□□□ -0.27
GRIA1-213ENST00000521843 TNNQ9UQP3 1299 aa13.36□□□□□ -0.27
GRIA1-213ENST00000521843 PCDHB15Q9Y5E8 787 aa13.36□□□□□ -0.27
GRIA1-213ENST00000521843 DZIP1LQ8IYY4 767 aaKnown RBP13.36□□□□□ -0.27
GRIA1-213ENST00000521843 MVPQ14764 893 aaKnown RBP13.35□□□□□ -0.27
GRIA1-213ENST00000521843 PLEKHF1Q96S99 279 aa13.35□□□□□ -0.27
GRIA1-213ENST00000521843 CABP1Q9NZU7 370 aa13.35□□□□□ -0.27
GRIA1-213ENST00000521843 EXOSC9Q06265 439 aaKnown RBP13.35□□□□□ -0.27
GRIA1-213ENST00000521843 FAM69CQ0P6D2 419 aa13.35□□□□□ -0.27
GRIA1-213ENST00000521843 MED14O60244 1454 aa13.34□□□□□ -0.27
GRIA1-213ENST00000521843 ADGRB2O60241 1585 aa13.34□□□□□ -0.27
GRIA1-213ENST00000521843 RIPK4P57078 832 aa13.34□□□□□ -0.27
GRIA1-213ENST00000521843 UPF2Q9HAU5 1272 aaKnown RBP13.34□□□□□ -0.27
GRIA1-213ENST00000521843 PPP6R1Q9UPN7 881 aa13.34□□□□□ -0.27
GRIA1-213ENST00000521843 MYO5BQ9ULV0 1848 aa13.33□□□□□ -0.27
GRIA1-213ENST00000521843 IL16Q14005 1332 aa13.33□□□□□ -0.28
GRIA1-213ENST00000521843 TRIM35Q9UPQ4 493 aa13.33□□□□□ -0.28
GRIA1-213ENST00000521843 PDZRN3Q9UPQ7 1066 aa13.33□□□□□ -0.28
GRIA1-213ENST00000521843 NFKBIBQ15653 356 aa13.32□□□□□ -0.28
GRIA1-213ENST00000521843 ALKQ9UM73 1620 aa13.32□□□□□ -0.28
GRIA1-213ENST00000521843 CD163L1Q9NR16 1453 aa13.31□□□□□ -0.28
GRIA1-213ENST00000521843 BECN1Q14457 450 aa13.31□□□□□ -0.28
GRIA1-213ENST00000521843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.31□□□□□ -0.28
GRIA1-213ENST00000521843 COL3A1P02461 1466 aaPredicted RBP13.31□□□□□ -0.28
GRIA1-213ENST00000521843 FCHSD2O94868 740 aa13.31□□□□□ -0.28
GRIA1-213ENST00000521843 SSH1Q8WYL5 1049 aa13.31□□□□□ -0.28
GRIA1-213ENST00000521843 DDX19BQ9UMR2 479 aa13.31□□□□□ -0.28
GRIA1-213ENST00000521843 ITPRIPQ8IWB1 547 aa13.3□□□□□ -0.28
GRIA1-213ENST00000521843 ZMYM3Q14202 1370 aa13.3□□□□□ -0.28
GRIA1-213ENST00000521843 ARHGEF40Q8TER5 1519 aa13.3□□□□□ -0.28
GRIA1-213ENST00000521843 IPO8O15397 1037 aaKnown RBP13.3□□□□□ -0.28
GRIA1-213ENST00000521843 ATF7IPQ6VMQ6 1270 aa13.3□□□□□ -0.28
GRIA1-213ENST00000521843 CLTCQ00610 1675 aaKnown RBP13.29□□□□□ -0.28
GRIA1-213ENST00000521843 NLRP1Q9C000 1473 aa13.29□□□□□ -0.28
GRIA1-213ENST00000521843 TRIM27P14373 513 aa13.29□□□□□ -0.28
GRIA1-213ENST00000521843 WAPLQ7Z5K2 1190 aa13.29□□□□□ -0.28
GRIA1-213ENST00000521843 PNPLA6Q8IY17 1366 aa13.29□□□□□ -0.28
GRIA1-213ENST00000521843 KIF16BQ96L93 1317 aa13.28□□□□□ -0.28
GRIA1-213ENST00000521843 SEC24BO95487 1268 aa13.28□□□□□ -0.28
GRIA1-213ENST00000521843 MLECQ14165 292 aa13.28□□□□□ -0.28
GRIA1-213ENST00000521843 USP19O94966 1318 aa13.28□□□□□ -0.28
GRIA1-213ENST00000521843 NOB1Q9ULX3 412 aaKnown RBP13.28□□□□□ -0.28
GRIA1-213ENST00000521843 ANKRD26Q9UPS8 1709 aa13.27□□□□□ -0.28
GRIA1-213ENST00000521843 PRKAR2BP31323 418 aa13.27□□□□□ -0.28
GRIA1-213ENST00000521843 RIMS2Q9UQ26 1411 aa13.27□□□□□ -0.29
GRIA1-213ENST00000521843 ESF1Q9H501 851 aaKnown RBP13.27□□□□□ -0.29
GRIA1-213ENST00000521843 POLKQ9UBT6 870 aa13.26□□□□□ -0.29
GRIA1-213ENST00000521843 CALD1Q05682 793 aaKnown RBP13.26□□□□□ -0.29
GRIA1-213ENST00000521843 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.26□□□□□ -0.29
GRIA1-213ENST00000521843 A2ML1A8K2U0 1454 aa13.25□□□□□ -0.29
GRIA1-213ENST00000521843 ATP7BP35670 1465 aa13.25□□□□□ -0.29
GRIA1-213ENST00000521843 VIRMAQ69YN4 1812 aaKnown RBP13.25□□□□□ -0.29
GRIA1-213ENST00000521843 HDAC1Q13547 482 aaPredicted RBP13.25□□□□□ -0.29
GRIA1-213ENST00000521843 ALDH1L2Q3SY69 923 aa13.25□□□□□ -0.29
GRIA1-213ENST00000521843 AGLP35573 1532 aa13.25□□□□□ -0.29
GRIA1-213ENST00000521843 DLC1Q96QB1 1528 aa13.25□□□□□ -0.29
GRIA1-213ENST00000521843 GSE1Q14687 1217 aa13.25□□□□□ -0.29
GRIA1-213ENST00000521843 RSPH6AQ9H0K4 717 aa13.25□□□□□ -0.29
GRIA1-213ENST00000521843 PODXL2Q9NZ53 605 aa13.25□□□□□ -0.29
GRIA1-213ENST00000521843 ZNF428Q96B54 188 aa13.24□□□□□ -0.29
GRIA1-213ENST00000521843 WASLO00401 505 aaPredicted RBP13.24□□□□□ -0.29
GRIA1-213ENST00000521843 TMEM57Q8N5G2 664 aa13.24□□□□□ -0.29
GRIA1-213ENST00000521843 FBLN1P23142 703 aa13.24□□□□□ -0.29
GRIA1-213ENST00000521843 HDGFP51858 240 aaKnown RBP13.24□□□□□ -0.29
GRIA1-213ENST00000521843 HMOX1P09601 288 aa13.23□□□□□ -0.29
GRIA1-213ENST00000521843 NFE2L2Q16236 605 aa13.23□□□□□ -0.29
GRIA1-213ENST00000521843 TBC1D32Q96NH3 1257 aa13.23□□□□□ -0.29
GRIA1-213ENST00000521843 REREQ9P2R6 1566 aa13.22□□□□□ -0.29
GRIA1-213ENST00000521843 KIF20BQ96Q89 1820 aa13.22□□□□□ -0.29
GRIA1-213ENST00000521843 FAM135BQ49AJ0 1406 aa13.21□□□□□ -0.29
GRIA1-213ENST00000521843 EDC4Q6P2E9 1401 aaKnown RBP13.21□□□□□ -0.29
GRIA1-213ENST00000521843 FRAT2O75474 233 aaPredicted RBP13.21□□□□□ -0.29
GRIA1-213ENST00000521843 COG3Q96JB2 828 aa13.21□□□□□ -0.29
GRIA1-213ENST00000521843 CHMP4BQ9H444 224 aaKnown RBP13.21□□□□□ -0.29
GRIA1-213ENST00000521843 SPATA31D1Q6ZQQ2 1576 aa13.21□□□□□ -0.29
GRIA1-213ENST00000521843 PPIP5K1Q6PFW1 1433 aa13.21□□□□□ -0.29
GRIA1-213ENST00000521843 TXNDC2Q86VQ3 553 aa13.21□□□□□ -0.29
GRIA1-213ENST00000521843 ZBTB40Q9NUA8 1239 aa13.21□□□□□ -0.29
GRIA1-213ENST00000521843 EMILIN1Q9Y6C2 1016 aa13.21□□□□□ -0.29
GRIA1-213ENST00000521843 DIP2BQ9P265 1576 aa13.21□□□□□ -0.3
GRIA1-213ENST00000521843 LRRC7Q96NW7 1537 aa13.21□□□□□ -0.3
GRIA1-213ENST00000521843 GNAI1P63096 354 aa13.21□□□□□ -0.3
GRIA1-213ENST00000521843 NME9Q86XW9 330 aa13.21□□□□□ -0.3
GRIA1-213ENST00000521843 SMC5Q8IY18 1101 aa13.21□□□□□ -0.3
GRIA1-213ENST00000521843 TSPOAP1O95153 1857 aa13.2□□□□□ -0.3
GRIA1-213ENST00000521843 NUDT16Q96DE0 195 aaKnown RBP13.2□□□□□ -0.3
GRIA1-213ENST00000521843 CCDC61Q9Y6R9 512 aa13.2□□□□□ -0.3
GRIA1-213ENST00000521843 CDC42BPGQ6DT37 1551 aa13.2□□□□□ -0.3
GRIA1-213ENST00000521843 LMOD3Q0VAK6 560 aa13.2□□□□□ -0.3
GRIA1-213ENST00000521843 PHACTR3Q96KR7 559 aa13.2□□□□□ -0.3
GRIA1-213ENST00000521843 SLKQ9H2G2 1235 aaPredicted RBP13.19□□□□□ -0.3
GRIA1-213ENST00000521843 IL13P35225 146 aa13.19□□□□□ -0.3
GRIA1-213ENST00000521843 CPSF1Q10570 1443 aaKnown RBP13.18□□□□□ -0.3
GRIA1-213ENST00000521843 BRPF1P55201 1214 aaPredicted RBP13.18□□□□□ -0.3
GRIA1-213ENST00000521843 THUMPD2Q9BTF0 503 aaKnown RBP13.18□□□□□ -0.3
GRIA1-213ENST00000521843 IFT57Q9NWB7 429 aa13.18□□□□□ -0.3
GRIA1-213ENST00000521843 METP08581 1390 aa13.18□□□□□ -0.3
GRIA1-213ENST00000521843 MFAP1P55081 439 aaKnown RBP13.17□□□□□ -0.3
GRIA1-213ENST00000521843 AATKQ6ZMQ8 1374 aa13.17□□□□□ -0.3
GRIA1-213ENST00000521843 VAMP4O75379 141 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms