RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 GLIPR1L2Q4G1C9 344 aa15.45■□□□□ 0.06
DENND3-217ENST00000521835 LNPKQ9C0E8 428 aa15.45■□□□□ 0.06
DENND3-217ENST00000521835 ESF1Q9H501 851 aaKnown RBP15.45■□□□□ 0.06
DENND3-217ENST00000521835 TRIM35Q9UPQ4 493 aa15.44■□□□□ 0.06
DENND3-217ENST00000521835 TULP4Q9NRJ4 1543 aa15.44■□□□□ 0.06
DENND3-217ENST00000521835 DCTN1Q14203 1278 aa15.44■□□□□ 0.06
DENND3-217ENST00000521835 NME9Q86XW9 330 aa15.44■□□□□ 0.06
DENND3-217ENST00000521835 GSE1Q14687 1217 aa15.43■□□□□ 0.06
DENND3-217ENST00000521835 ZMYND15Q9H091 742 aa15.43■□□□□ 0.06
DENND3-217ENST00000521835 ADGRB1O14514 1584 aa15.43■□□□□ 0.06
DENND3-217ENST00000521835 GLI2P10070 1586 aa15.43■□□□□ 0.06
DENND3-217ENST00000521835 NGEFQ8N5V2 710 aa15.43■□□□□ 0.06
DENND3-217ENST00000521835 SLC52A1Q9NWF4 448 aa15.43■□□□□ 0.06
DENND3-217ENST00000521835 APBB1O00213 710 aa15.42■□□□□ 0.06
DENND3-217ENST00000521835 PHACTR3Q96KR7 559 aa15.42■□□□□ 0.06
DENND3-217ENST00000521835 HECW2Q9P2P5 1572 aa15.42■□□□□ 0.06
DENND3-217ENST00000521835 BECN1Q14457 450 aa15.42■□□□□ 0.06
DENND3-217ENST00000521835 GZF1Q9H116 711 aaPredicted RBP15.42■□□□□ 0.06
DENND3-217ENST00000521835 USP35Q9P2H5 1018 aa15.42■□□□□ 0.06
DENND3-217ENST00000521835 USP19O94966 1318 aa15.41■□□□□ 0.06
DENND3-217ENST00000521835 NRXN1Q9ULB1 1477 aa15.41■□□□□ 0.06
DENND3-217ENST00000521835 FAM83GA6ND36 823 aa15.41■□□□□ 0.06
DENND3-217ENST00000521835 ATF7IPQ6VMQ6 1270 aa15.41■□□□□ 0.06
DENND3-217ENST00000521835 FOXD4L1Q9NU39 408 aa15.4■□□□□ 0.06
DENND3-217ENST00000521835 KIAA1210Q9ULL0 1709 aa15.4■□□□□ 0.06
DENND3-217ENST00000521835 MLH3Q9UHC1 1453 aa15.4■□□□□ 0.06
DENND3-217ENST00000521835 TSPYL6Q8N831 410 aa15.39■□□□□ 0.05
DENND3-217ENST00000521835 VSIG10Q8N0Z9 540 aa15.38■□□□□ 0.05
DENND3-217ENST00000521835 PLEKHF1Q96S99 279 aa15.38■□□□□ 0.05
DENND3-217ENST00000521835 YTHDC2Q9H6S0 1430 aaKnown RBP15.37■□□□□ 0.05
DENND3-217ENST00000521835 PHF23Q9BUL5 403 aaPredicted RBP15.37■□□□□ 0.05
DENND3-217ENST00000521835 CAMSAP1Q5T5Y3 1602 aa15.37■□□□□ 0.05
DENND3-217ENST00000521835 POLKQ9UBT6 870 aa15.37■□□□□ 0.05
DENND3-217ENST00000521835 SIGLEC1Q9BZZ2 1709 aa15.37■□□□□ 0.05
DENND3-217ENST00000521835 PPLO60437 1756 aa15.37■□□□□ 0.05
DENND3-217ENST00000521835 DDX19BQ9UMR2 479 aa15.36■□□□□ 0.05
DENND3-217ENST00000521835 ATAD2Q6PL18 1390 aa15.36■□□□□ 0.05
DENND3-217ENST00000521835 ABCC11Q96J66 1382 aa15.36■□□□□ 0.05
DENND3-217ENST00000521835 ANKRD45Q5TZF3 282 aa15.36■□□□□ 0.05
DENND3-217ENST00000521835 IFT172Q9UG01 1749 aa15.36■□□□□ 0.05
DENND3-217ENST00000521835 SHPRHQ149N8 1683 aa15.36■□□□□ 0.05
DENND3-217ENST00000521835 LMTK2Q8IWU2 1503 aa15.35■□□□□ 0.05
DENND3-217ENST00000521835 IQSEC2Q5JU85 1478 aa15.35■□□□□ 0.05
DENND3-217ENST00000521835 CCDC27Q2M243 656 aa15.35■□□□□ 0.05
DENND3-217ENST00000521835 KRT24Q2M2I5 525 aa15.35■□□□□ 0.05
DENND3-217ENST00000521835 TBC1D2Q9BYX2 928 aa15.35■□□□□ 0.05
DENND3-217ENST00000521835 NINLQ9Y2I6 1382 aa15.35■□□□□ 0.05
DENND3-217ENST00000521835 NEXMIFQ5QGS0 1516 aa15.34■□□□□ 0.05
DENND3-217ENST00000521835 SETBP1Q9Y6X0 1596 aa15.34■□□□□ 0.05
DENND3-217ENST00000521835 C22orf23Q9BZE7 217 aa15.33■□□□□ 0.04
DENND3-217ENST00000521835 IPO8O15397 1037 aaKnown RBP15.32■□□□□ 0.04
DENND3-217ENST00000521835 AEBP1Q8IUX7 1158 aa15.32■□□□□ 0.04
DENND3-217ENST00000521835 NSD2O96028 1365 aa15.32■□□□□ 0.04
DENND3-217ENST00000521835 COG3Q96JB2 828 aa15.32■□□□□ 0.04
DENND3-217ENST00000521835 TBC1D32Q96NH3 1257 aa15.31■□□□□ 0.04
DENND3-217ENST00000521835 DIP2CQ9Y2E4 1556 aa15.31■□□□□ 0.04
DENND3-217ENST00000521835 HSP90AA1P07900 732 aaKnown RBP15.31■□□□□ 0.04
DENND3-217ENST00000521835 MIS18AQ9NYP9 233 aa15.31■□□□□ 0.04
DENND3-217ENST00000521835 RSPH6AQ9H0K4 717 aa15.3■□□□□ 0.04
DENND3-217ENST00000521835 MYO3AQ8NEV4 1616 aa15.3■□□□□ 0.04
DENND3-217ENST00000521835 A0A0U1RQG5 324 aaPredicted RBP15.3■□□□□ 0.04
DENND3-217ENST00000521835 NUDT16Q96DE0 195 aaKnown RBP15.3■□□□□ 0.04
DENND3-217ENST00000521835 SLC26A8Q96RN1 970 aa15.3■□□□□ 0.04
DENND3-217ENST00000521835 KIF16BQ96L93 1317 aa15.3■□□□□ 0.04
DENND3-217ENST00000521835 TSPOAP1O95153 1857 aa15.3■□□□□ 0.04
DENND3-217ENST00000521835 ZC3H13Q5T200 1668 aaKnown RBP15.3■□□□□ 0.04
DENND3-217ENST00000521835 MYO5BQ9ULV0 1848 aa15.3■□□□□ 0.04
DENND3-217ENST00000521835 ARHGEF28Q8N1W1 1705 aaKnown RBP15.29■□□□□ 0.04
DENND3-217ENST00000521835 PIK3C2BO00750 1634 aa15.29■□□□□ 0.04
DENND3-217ENST00000521835 MBIPQ9NS73 344 aa15.29■□□□□ 0.04
DENND3-217ENST00000521835 FCHSD2O94868 740 aa15.29■□□□□ 0.04
DENND3-217ENST00000521835 NUTM2GQ5VZR2 741 aa15.29■□□□□ 0.04
DENND3-217ENST00000521835 MCM10Q7L590 875 aa15.29■□□□□ 0.04
DENND3-217ENST00000521835 C8orf58Q8NAV2 365 aa15.29■□□□□ 0.04
DENND3-217ENST00000521835 TWISTNBQ3B726 338 aaPredicted RBP15.28■□□□□ 0.04
DENND3-217ENST00000521835 SULT6B1Q6IMI4 303 aa15.28■□□□□ 0.04
DENND3-217ENST00000521835 NECTIN2Q92692 538 aa15.28■□□□□ 0.04
DENND3-217ENST00000521835 NFE2L2Q16236 605 aa15.28■□□□□ 0.04
DENND3-217ENST00000521835 PNNQ9H307 717 aaKnown RBP15.28■□□□□ 0.04
DENND3-217ENST00000521835 PTPRMP28827 1452 aa15.28■□□□□ 0.04
DENND3-217ENST00000521835 ZBTB7CA1YPR0 619 aa15.28■□□□□ 0.04
DENND3-217ENST00000521835 CEBPAP49715 358 aaPredicted RBP15.27■□□□□ 0.04
DENND3-217ENST00000521835 ZBTB40Q9NUA8 1239 aa15.27■□□□□ 0.04
DENND3-217ENST00000521835 WASLO00401 505 aaPredicted RBP15.27■□□□□ 0.03
DENND3-217ENST00000521835 C14orf37Q86TY3 774 aa15.27■□□□□ 0.03
DENND3-217ENST00000521835 HSCBQ8IWL3 235 aa15.26■□□□□ 0.03
DENND3-217ENST00000521835 NEO1Q92859 1461 aa15.26■□□□□ 0.03
DENND3-217ENST00000521835 PPIP5K1Q6PFW1 1433 aa15.26■□□□□ 0.03
DENND3-217ENST00000521835 PDE4CQ08493 712 aa15.26■□□□□ 0.03
DENND3-217ENST00000521835 SLC4A10Q6U841 1118 aa15.26■□□□□ 0.03
DENND3-217ENST00000521835 METP08581 1390 aa15.25■□□□□ 0.03
DENND3-217ENST00000521835 CHD1LQ86WJ1 897 aa15.25■□□□□ 0.03
DENND3-217ENST00000521835 RIMS2Q9UQ26 1411 aa15.25■□□□□ 0.03
DENND3-217ENST00000521835 CD163L1Q9NR16 1453 aa15.25■□□□□ 0.03
DENND3-217ENST00000521835 HSP90AB1P08238 724 aaKnown RBP15.24■□□□□ 0.03
DENND3-217ENST00000521835 LTV1Q96GA3 475 aaPredicted RBP15.24■□□□□ 0.03
DENND3-217ENST00000521835 NEURL4Q96JN8 1562 aa15.24■□□□□ 0.03
DENND3-217ENST00000521835 CFAP74Q9C0B2 1584 aa15.24■□□□□ 0.03
DENND3-217ENST00000521835 VAMP4O75379 141 aa15.24■□□□□ 0.03
DENND3-217ENST00000521835 RBM42Q9BTD8 480 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms