RNA–Protein interactions for RNA: ENST00000520608.2

ZNF260-201, Transcript of zinc finger protein 260, humanhuman

TSL 3

Gene ZNF260, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-201ENST00000520608 USP32Q8NFA0 1604 aa12.55□□□□□ -0.4
ZNF260-201ENST00000520608 TNS3Q68CZ2 1445 aa12.55□□□□□ -0.4
ZNF260-201ENST00000520608 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.55□□□□□ -0.4
ZNF260-201ENST00000520608 PSME1Q06323 249 aa12.55□□□□□ -0.4
ZNF260-201ENST00000520608 CHADLQ6NUI6 762 aa12.55□□□□□ -0.4
ZNF260-201ENST00000520608 UNC5CLQ8IV45 518 aa12.55□□□□□ -0.4
ZNF260-201ENST00000520608 SIRT1Q96EB6 747 aa12.55□□□□□ -0.4
ZNF260-201ENST00000520608 POGKQ9P215 609 aa12.55□□□□□ -0.4
ZNF260-201ENST00000520608 SSUH2Q9Y2M2 353 aa12.55□□□□□ -0.4
ZNF260-201ENST00000520608 RGPD8O14715 1765 aaPredicted RBP12.55□□□□□ -0.4
ZNF260-201ENST00000520608 RAB3GAP2Q9H2M9 1393 aa12.55□□□□□ -0.4
ZNF260-201ENST00000520608 EP400Q96L91 3159 aa12.54□□□□□ -0.4
ZNF260-201ENST00000520608 RALGAPBQ86X10 1494 aa12.53□□□□□ -0.4
ZNF260-201ENST00000520608 SLIT2O94813 1529 aa12.53□□□□□ -0.4
ZNF260-201ENST00000520608 CABLES1Q8TDN4 633 aa12.53□□□□□ -0.4
ZNF260-201ENST00000520608 GLI3P10071 1580 aa12.52□□□□□ -0.4
ZNF260-201ENST00000520608 PMFBP1Q8TBY8 1022 aa12.52□□□□□ -0.41
ZNF260-201ENST00000520608 HIRIP3Q9BW71 556 aaPredicted RBP12.52□□□□□ -0.41
ZNF260-201ENST00000520608 CCDC9Q9Y3X0 531 aaKnown RBP12.52□□□□□ -0.41
ZNF260-201ENST00000520608 DLC1Q96QB1 1528 aa12.52□□□□□ -0.41
ZNF260-201ENST00000520608 ZRANB1Q9UGI0 708 aa12.51□□□□□ -0.41
ZNF260-201ENST00000520608 TRAK1Q9UPV9 953 aa12.51□□□□□ -0.41
ZNF260-201ENST00000520608 KDM2AQ9Y2K7 1162 aa12.51□□□□□ -0.41
ZNF260-201ENST00000520608 SBNO1A3KN83 1393 aa12.51□□□□□ -0.41
ZNF260-201ENST00000520608 ARHGEF10O15013 1369 aa12.51□□□□□ -0.41
ZNF260-201ENST00000520608 PLCH1Q4KWH8 1693 aa12.51□□□□□ -0.41
ZNF260-201ENST00000520608 CCDC125Q86Z20 511 aa12.5□□□□□ -0.41
ZNF260-201ENST00000520608 ANKARQ7Z5J8 1434 aa12.5□□□□□ -0.41
ZNF260-201ENST00000520608 ADGRB2O60241 1585 aa12.5□□□□□ -0.41
ZNF260-201ENST00000520608 ABCA3Q99758 1704 aa12.5□□□□□ -0.41
ZNF260-201ENST00000520608 ADGRB1O14514 1584 aa12.49□□□□□ -0.41
ZNF260-201ENST00000520608 MINK1Q8N4C8 1332 aaPredicted RBP12.49□□□□□ -0.41
ZNF260-201ENST00000520608 DCAF11Q8TEB1 546 aa12.49□□□□□ -0.41
ZNF260-201ENST00000520608 PLSCR2Q9NRY7 297 aa12.49□□□□□ -0.41
ZNF260-201ENST00000520608 A0A0G2JS52 829 aa12.48□□□□□ -0.41
ZNF260-201ENST00000520608 MYT1Q01538 1121 aa12.48□□□□□ -0.41
ZNF260-201ENST00000520608 VPS72Q15906 364 aa12.48□□□□□ -0.41
ZNF260-201ENST00000520608 SEPT12Q8IYM1 358 aa12.48□□□□□ -0.41
ZNF260-201ENST00000520608 SRCAPQ6ZRS2 3230 aa12.48□□□□□ -0.41
ZNF260-201ENST00000520608 NWD2Q9ULI1 1742 aa12.48□□□□□ -0.41
ZNF260-201ENST00000520608 BLMP54132 1417 aaPredicted RBP12.47□□□□□ -0.41
ZNF260-201ENST00000520608 EIF3AQ14152 1382 aaKnown RBP12.47□□□□□ -0.41
ZNF260-201ENST00000520608 GPRASP1Q5JY77 1395 aa12.47□□□□□ -0.41
ZNF260-201ENST00000520608 PRR29P0C7W0 189 aa12.47□□□□□ -0.41
ZNF260-201ENST00000520608 SF3B2Q13435 895 aaKnown RBP12.47□□□□□ -0.41
ZNF260-201ENST00000520608 TULP4Q9NRJ4 1543 aa12.47□□□□□ -0.41
ZNF260-201ENST00000520608 BRWD3Q6RI45 1802 aa12.46□□□□□ -0.41
ZNF260-201ENST00000520608 TRPM3Q9HCF6 1732 aaPredicted RBP12.45□□□□□ -0.42
ZNF260-201ENST00000520608 FAM83GA6ND36 823 aa12.45□□□□□ -0.42
ZNF260-201ENST00000520608 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
ZNF260-201ENST00000520608 PRR36Q9H6K5 1346 aa12.44□□□□□ -0.42
ZNF260-201ENST00000520608 WASLO00401 505 aaPredicted RBP12.44□□□□□ -0.42
ZNF260-201ENST00000520608 KRT27Q7Z3Y8 459 aa12.44□□□□□ -0.42
ZNF260-201ENST00000520608 DEFB132Q7Z7B7 95 aa12.44□□□□□ -0.42
ZNF260-201ENST00000520608 NGDNQ8NEJ9 315 aaKnown RBP12.44□□□□□ -0.42
ZNF260-201ENST00000520608 BTG4Q9NY30 223 aa12.44□□□□□ -0.42
ZNF260-201ENST00000520608 ALS2Q96Q42 1657 aa12.43□□□□□ -0.42
ZNF260-201ENST00000520608 NRAPQ86VF7 1730 aa12.42□□□□□ -0.42
ZNF260-201ENST00000520608 FAM98CQ17RN3 349 aaKnown RBP12.42□□□□□ -0.42
ZNF260-201ENST00000520608 COL14A1Q05707 1796 aaKnown RBP12.42□□□□□ -0.42
ZNF260-201ENST00000520608 ARHGEF28Q8N1W1 1705 aaKnown RBP12.42□□□□□ -0.42
ZNF260-201ENST00000520608 CD44P16070 742 aaKnown RBP12.41□□□□□ -0.42
ZNF260-201ENST00000520608 STAC3Q96MF2 364 aa12.41□□□□□ -0.42
ZNF260-201ENST00000520608 ITSN1Q15811 1721 aa12.4□□□□□ -0.42
ZNF260-201ENST00000520608 ONECUT3O60422 494 aaPredicted RBP12.4□□□□□ -0.42
ZNF260-201ENST00000520608 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
ZNF260-201ENST00000520608 PRDM11Q9NQV5 511 aa12.4□□□□□ -0.42
ZNF260-201ENST00000520608 ATP7BP35670 1465 aa12.4□□□□□ -0.43
ZNF260-201ENST00000520608 NUDT16Q96DE0 195 aaKnown RBP12.39□□□□□ -0.43
ZNF260-201ENST00000520608 CRYBG1Q9Y4K1 1723 aa12.38□□□□□ -0.43
ZNF260-201ENST00000520608 CLCN6P51797 869 aa12.38□□□□□ -0.43
ZNF260-201ENST00000520608 BAG6P46379 1132 aa12.37□□□□□ -0.43
ZNF260-201ENST00000520608 FAM182BQ5T319 152 aa12.37□□□□□ -0.43
ZNF260-201ENST00000520608 NUTM2GQ5VZR2 741 aa12.37□□□□□ -0.43
ZNF260-201ENST00000520608 CDK19Q9BWU1 502 aa12.37□□□□□ -0.43
ZNF260-201ENST00000520608 SPATA31A5Q5VU36 1347 aa12.37□□□□□ -0.43
ZNF260-201ENST00000520608 SPATA31A7Q8IWB4 1347 aa12.37□□□□□ -0.43
ZNF260-201ENST00000520608 KIAA0232Q92628 1395 aa12.36□□□□□ -0.43
ZNF260-201ENST00000520608 HRCP23327 699 aa12.36□□□□□ -0.43
ZNF260-201ENST00000520608 CHRNA2Q15822 529 aa12.36□□□□□ -0.43
ZNF260-201ENST00000520608 STRN4Q9NRL3 753 aa12.36□□□□□ -0.43
ZNF260-201ENST00000520608 PHRF1Q9P1Y6 1649 aaKnown RBP12.36□□□□□ -0.43
ZNF260-201ENST00000520608 ZC3H6P61129 1189 aaKnown RBP12.35□□□□□ -0.43
ZNF260-201ENST00000520608 TOPAZ1Q8N9V7 1692 aa12.35□□□□□ -0.43
ZNF260-201ENST00000520608 PSDA5PKW4 1024 aaPredicted RBP12.34□□□□□ -0.43
ZNF260-201ENST00000520608 THSD7AQ9UPZ6 1657 aa12.34□□□□□ -0.43
ZNF260-201ENST00000520608 ACEP12821 1306 aa12.34□□□□□ -0.43
ZNF260-201ENST00000520608 RGPD1P0DJD0 1748 aa12.34□□□□□ -0.43
ZNF260-201ENST00000520608 USP35Q9P2H5 1018 aa12.33□□□□□ -0.44
ZNF260-201ENST00000520608 KIAA1210Q9ULL0 1709 aa12.33□□□□□ -0.44
ZNF260-201ENST00000520608 POLR3AO14802 1390 aaPredicted RBP12.32□□□□□ -0.44
ZNF260-201ENST00000520608 SRPK2P78362 688 aaKnown RBP12.32□□□□□ -0.44
ZNF260-201ENST00000520608 EN1Q05925 392 aaPredicted RBP12.32□□□□□ -0.44
ZNF260-201ENST00000520608 NBPF8Q3BBV2 869 aa12.32□□□□□ -0.44
ZNF260-201ENST00000520608 DCBLD2Q96PD2 775 aa12.32□□□□□ -0.44
ZNF260-201ENST00000520608 CCDC61Q9Y6R9 512 aa12.32□□□□□ -0.44
ZNF260-201ENST00000520608 SPATA31A1Q5TZJ5 1347 aa12.32□□□□□ -0.44
ZNF260-201ENST00000520608 EVA1CP58658 441 aa12.31□□□□□ -0.44
ZNF260-201ENST00000520608 NBPF1Q3BBV0 1214 aa12.31□□□□□ -0.44
ZNF260-201ENST00000520608 ABTB2Q8N961 1025 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms