RNA–Protein interactions for RNA: ENST00000519802.5

PCM1-213, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-213ENST00000519802 PLEKHG3A1L390 1219 aa10.46□□□□□ -0.73
PCM1-213ENST00000519802 GJA5P36382 358 aa10.46□□□□□ -0.73
PCM1-213ENST00000519802 NPAS3Q8IXF0 933 aa10.46□□□□□ -0.73
PCM1-213ENST00000519802 BEGAINQ9BUH8 593 aa10.46□□□□□ -0.73
PCM1-213ENST00000519802 NNTQ13423 1086 aa10.45□□□□□ -0.74
PCM1-213ENST00000519802 LYPD8Q6UX82 237 aa10.44□□□□□ -0.74
PCM1-213ENST00000519802 ZC3H15Q8WU90 426 aaKnown RBP10.44□□□□□ -0.74
PCM1-213ENST00000519802 ZFP42Q96MM3 310 aa10.44□□□□□ -0.74
PCM1-213ENST00000519802 TBC1D2Q9BYX2 928 aa10.44□□□□□ -0.74
PCM1-213ENST00000519802 H3BM21 787 aa10.43□□□□□ -0.74
PCM1-213ENST00000519802 GMPRP36959 345 aa10.43□□□□□ -0.74
PCM1-213ENST00000519802 RSBN1LQ6PCB5 846 aaPredicted RBP10.43□□□□□ -0.74
PCM1-213ENST00000519802 VEGFBP49765 207 aa10.42□□□□□ -0.74
PCM1-213ENST00000519802 IRF7Q92985 503 aa10.42□□□□□ -0.74
PCM1-213ENST00000519802 PCDHB15Q9Y5E8 787 aa10.42□□□□□ -0.74
PCM1-213ENST00000519802 CTHP32929 405 aa10.41□□□□□ -0.74
PCM1-213ENST00000519802 DIXDC1Q155Q3 683 aa10.41□□□□□ -0.74
PCM1-213ENST00000519802 CFAP99D6REC4 459 aa10.4□□□□□ -0.74
PCM1-213ENST00000519802 SPTLC1O15269 473 aa10.4□□□□□ -0.74
PCM1-213ENST00000519802 TIMP2P16035 220 aa10.4□□□□□ -0.74
PCM1-213ENST00000519802 MRPL14Q6P1L8 145 aaKnown RBP10.4□□□□□ -0.74
PCM1-213ENST00000519802 PARP9Q8IXQ6 854 aa10.4□□□□□ -0.74
PCM1-213ENST00000519802 FAM174AQ8TBP5 190 aa10.4□□□□□ -0.74
PCM1-213ENST00000519802 ADH1CP00326 375 aa10.39□□□□□ -0.75
PCM1-213ENST00000519802 LORP23490 312 aaPredicted RBP10.39□□□□□ -0.75
PCM1-213ENST00000519802 WDR4P57081 412 aaKnown RBP10.39□□□□□ -0.75
PCM1-213ENST00000519802 KLF16Q9BXK1 252 aaPredicted RBP10.39□□□□□ -0.75
PCM1-213ENST00000519802 ERBB4Q15303 1308 aa10.38□□□□□ -0.75
PCM1-213ENST00000519802 F12P00748 615 aaPredicted RBP10.37□□□□□ -0.75
PCM1-213ENST00000519802 HRCP23327 699 aa10.37□□□□□ -0.75
PCM1-213ENST00000519802 SCARF1Q14162 830 aa10.37□□□□□ -0.75
PCM1-213ENST00000519802 ZSCAN1Q8NBB4 408 aa10.37□□□□□ -0.75
PCM1-213ENST00000519802 FOXJ1Q92949 421 aa10.37□□□□□ -0.75
PCM1-213ENST00000519802 CDK15Q96Q40 435 aa10.37□□□□□ -0.75
PCM1-213ENST00000519802 PURBQ96QR8 312 aaKnown RBP10.37□□□□□ -0.75
PCM1-213ENST00000519802 ZBTB3Q9H5J0 574 aa10.37□□□□□ -0.75
PCM1-213ENST00000519802 MAP10Q9P2G4 905 aa10.37□□□□□ -0.75
PCM1-213ENST00000519802 FAM181BA6NEQ2 426 aa10.36□□□□□ -0.75
PCM1-213ENST00000519802 TRIM66O15016 1216 aa10.35□□□□□ -0.75
PCM1-213ENST00000519802 PRPF38BQ5VTL8 546 aaKnown RBP10.35□□□□□ -0.75
PCM1-213ENST00000519802 RIC3Q7Z5B4 369 aa10.34□□□□□ -0.75
PCM1-213ENST00000519802 CABLES1Q8TDN4 633 aa10.34□□□□□ -0.75
PCM1-213ENST00000519802 SOBPA7XYQ1 873 aa10.32□□□□□ -0.76
PCM1-213ENST00000519802 ARID5BQ14865 1188 aa10.32□□□□□ -0.76
PCM1-213ENST00000519802 C4orf48Q5BLP8 95 aa10.32□□□□□ -0.76
PCM1-213ENST00000519802 ZFAND3Q9H8U3 227 aa10.32□□□□□ -0.76
PCM1-213ENST00000519802 PER1O15534 1290 aaPredicted RBP10.31□□□□□ -0.76
PCM1-213ENST00000519802 ZIC2O95409 532 aaPredicted RBP10.31□□□□□ -0.76
PCM1-213ENST00000519802 NR3C2P08235 984 aa10.31□□□□□ -0.76
PCM1-213ENST00000519802 NR5A1Q13285 461 aa10.31□□□□□ -0.76
PCM1-213ENST00000519802 GRM5P41594 1212 aa10.3□□□□□ -0.76
PCM1-213ENST00000519802 CSPP1Q1MSJ5 1256 aa10.3□□□□□ -0.76
PCM1-213ENST00000519802 ITPKCQ96DU7 683 aa10.3□□□□□ -0.76
PCM1-213ENST00000519802 AK7Q96M32 723 aa10.3□□□□□ -0.76
PCM1-213ENST00000519802 AGERQ15109 404 aa10.29□□□□□ -0.76
PCM1-213ENST00000519802 BPHLQ86WA6 291 aaPredicted RBP10.29□□□□□ -0.76
PCM1-213ENST00000519802 VSIG8P0DPA2 414 aa10.28□□□□□ -0.76
PCM1-213ENST00000519802 LIMD1Q9UGP4 676 aa10.27□□□□□ -0.77
PCM1-213ENST00000519802 QPCTQ16769 361 aa10.26□□□□□ -0.77
PCM1-213ENST00000519802 TUSC1Q2TAM9 212 aa10.26□□□□□ -0.77
PCM1-213ENST00000519802 C6orf118Q5T5N4 469 aa10.26□□□□□ -0.77
PCM1-213ENST00000519802 MYSM1Q5VVJ2 828 aa10.26□□□□□ -0.77
PCM1-213ENST00000519802 C1QTNF2Q9BXJ5 285 aa10.26□□□□□ -0.77
PCM1-213ENST00000519802 MAN1A2O60476 641 aa10.25□□□□□ -0.77
PCM1-213ENST00000519802 TSC1Q92574 1164 aa10.25□□□□□ -0.77
PCM1-213ENST00000519802 NUTM2BA6NNL0 878 aaPredicted RBP10.24□□□□□ -0.77
PCM1-213ENST00000519802 NUTM2EB1AL46 878 aaPredicted RBP10.24□□□□□ -0.77
PCM1-213ENST00000519802 LILRB3O75022 631 aa10.24□□□□□ -0.77
PCM1-213ENST00000519802 NUTM2DQ5VT03 806 aaPredicted RBP10.24□□□□□ -0.77
PCM1-213ENST00000519802 SH3RF1Q7Z6J0 888 aa10.24□□□□□ -0.77
PCM1-213ENST00000519802 NUTM2AQ8IVF1 878 aaPredicted RBP10.24□□□□□ -0.77
PCM1-213ENST00000519802 MEIOBQ8N635 442 aa10.24□□□□□ -0.77
PCM1-213ENST00000519802 ARMC2Q8NEN0 867 aa10.24□□□□□ -0.77
PCM1-213ENST00000519802 LINC00528Q8N1L1 170 aa10.23□□□□□ -0.77
PCM1-213ENST00000519802 UPP2O95045 317 aa10.22□□□□□ -0.77
PCM1-213ENST00000519802 BMP2P12643 396 aa10.22□□□□□ -0.77
PCM1-213ENST00000519802 MAP4K5Q9Y4K4 846 aa10.22□□□□□ -0.77
PCM1-213ENST00000519802 PDE4DQ08499 809 aa10.21□□□□□ -0.77
PCM1-213ENST00000519802 NBPF14Q5TI25 921 aa10.21□□□□□ -0.77
PCM1-213ENST00000519802 SH3BP5LQ7L8J4 393 aa10.21□□□□□ -0.77
PCM1-213ENST00000519802 TRMT44Q8IYL2 757 aaKnown RBP10.21□□□□□ -0.77
PCM1-213ENST00000519802 PPFIA3O75145 1194 aa10.2□□□□□ -0.78
PCM1-213ENST00000519802 FSHRP23945 695 aa10.2□□□□□ -0.78
PCM1-213ENST00000519802 SOS2Q07890 1332 aaPredicted RBP10.19□□□□□ -0.78
PCM1-213ENST00000519802 RTL5Q5HYW3 569 aaPredicted RBP10.19□□□□□ -0.78
PCM1-213ENST00000519802 VASH1Q7L8A9 365 aaPredicted RBP10.19□□□□□ -0.78
PCM1-213ENST00000519802 HELBQ8NG08 1087 aaPredicted RBP10.19□□□□□ -0.78
PCM1-213ENST00000519802 DNMT3LQ9UJW3 386 aa10.18□□□□□ -0.78
PCM1-213ENST00000519802 MAGEB6P1A0A0J9YX57 407 aa10.17□□□□□ -0.78
PCM1-213ENST00000519802 EMILIN1Q9Y6C2 1016 aa10.17□□□□□ -0.78
PCM1-213ENST00000519802 CLK2P49760 499 aaKnown RBP10.16□□□□□ -0.78
PCM1-213ENST00000519802 CCDC116Q8IYX3 515 aa10.16□□□□□ -0.78
PCM1-213ENST00000519802 TSEN34Q9BSV6 310 aaKnown RBP10.16□□□□□ -0.78
PCM1-213ENST00000519802 GPKOWQ92917 476 aaPredicted RBP eCLIP10.15□□□□□ -0.78
PCM1-213ENST00000519802 ERFEQ4G0M1 354 aa10.14□□□□□ -0.79
PCM1-213ENST00000519802 CARD14Q9BXL6 1004 aa10.14□□□□□ -0.79
PCM1-213ENST00000519802 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.12□□□□□ -0.791e-6■■□□□ 11.4
PCM1-213ENST00000519802 RSPH6AQ9H0K4 717 aa10.11□□□□□ -0.79
PCM1-213ENST00000519802 SLC24A3Q9HC58 644 aa10.11□□□□□ -0.79
PCM1-213ENST00000519802 POLR3EQ9NVU0 708 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms