RNA–Protein interactions for RNA: ENST00000519768.5

CTNNA1-218, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-218ENST00000519768 PTPN5P54829 565 aa8.34□□□□□ -1.07
CTNNA1-218ENST00000519768 MDM2Q00987 491 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-218ENST00000519768 POTEAQ6S8J7 498 aa8.34□□□□□ -1.07
CTNNA1-218ENST00000519768 GPCPD1Q9NPB8 672 aa8.34□□□□□ -1.07
CTNNA1-218ENST00000519768 DAXXQ9UER7 740 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-218ENST00000519768 CTTNBP2Q8WZ74 1663 aa8.34□□□□□ -1.08
CTNNA1-218ENST00000519768 NUP153P49790 1475 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-218ENST00000519768 TTLL12Q14166 644 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-218ENST00000519768 PARP9Q8IXQ6 854 aa8.33□□□□□ -1.08
CTNNA1-218ENST00000519768 EFCAB5A4FU69 1503 aa8.33□□□□□ -1.08
CTNNA1-218ENST00000519768 GOLGA8CPA6NN73 597 aa8.32□□□□□ -1.08
CTNNA1-218ENST00000519768 RANGAP1P46060 587 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-218ENST00000519768 MAGI2Q86UL8 1455 aa8.32□□□□□ -1.08
CTNNA1-218ENST00000519768 C9orf84Q5VXU9 1444 aa8.31□□□□□ -1.08
CTNNA1-218ENST00000519768 TRAPPC8Q9Y2L5 1435 aa8.31□□□□□ -1.08
CTNNA1-218ENST00000519768 PLEKHD1A6NEE1 506 aa8.31□□□□□ -1.08
CTNNA1-218ENST00000519768 LCE2BO14633 110 aa8.31□□□□□ -1.08
CTNNA1-218ENST00000519768 BRPF1P55201 1214 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-218ENST00000519768 SAMD7Q7Z3H4 446 aa8.31□□□□□ -1.08
CTNNA1-218ENST00000519768 NLRP7Q8WX94 980 aa8.31□□□□□ -1.08
CTNNA1-218ENST00000519768 RAPGEF6Q8TEU7 1601 aa8.3□□□□□ -1.08
CTNNA1-218ENST00000519768 SLC4A3P48751 1232 aa8.3□□□□□ -1.08
CTNNA1-218ENST00000519768 NEUROD2Q15784 382 aa8.3□□□□□ -1.08
CTNNA1-218ENST00000519768 SWT1Q5T5J6 900 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-218ENST00000519768 GIGYF2Q6Y7W6 1299 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-218ENST00000519768 SULF1Q8IWU6 871 aa8.3□□□□□ -1.08
CTNNA1-218ENST00000519768 ANKK1Q8NFD2 765 aa8.3□□□□□ -1.08
CTNNA1-218ENST00000519768 REPIN1Q9BWE0 567 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-218ENST00000519768 SLF2Q8IX21 1173 aa8.29□□□□□ -1.08
CTNNA1-218ENST00000519768 WNT2BQ93097 391 aa8.29□□□□□ -1.08
CTNNA1-218ENST00000519768 LRCH3Q96II8 777 aa8.29□□□□□ -1.08
CTNNA1-218ENST00000519768 FAM217BQ9NTX9 383 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-218ENST00000519768 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-218ENST00000519768 SOWAHBA6NEL2 793 aa8.28□□□□□ -1.08
CTNNA1-218ENST00000519768 RSPH4AQ5TD94 716 aa8.28□□□□□ -1.08
CTNNA1-218ENST00000519768 KDM4CQ9H3R0 1056 aa8.28□□□□□ -1.08
CTNNA1-218ENST00000519768 SSTR3P32745 418 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-218ENST00000519768 NECTIN2Q92692 538 aa8.27□□□□□ -1.09
CTNNA1-218ENST00000519768 GPBP1L1Q9HC44 474 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-218ENST00000519768 PLCH2O75038 1416 aa8.27□□□□□ -1.09
CTNNA1-218ENST00000519768 TOM1O60784 492 aa8.26□□□□□ -1.09
CTNNA1-218ENST00000519768 DIP2CQ9Y2E4 1556 aa8.26□□□□□ -1.09
CTNNA1-218ENST00000519768 PRXQ9BXM0 1461 aa8.26□□□□□ -1.09
CTNNA1-218ENST00000519768 DDX11L8A8MPP1 907 aa8.25□□□□□ -1.09
CTNNA1-218ENST00000519768 TRAF7Q6Q0C0 670 aa8.25□□□□□ -1.09
CTNNA1-218ENST00000519768 SETD1AO15047 1707 aaKnown RBP8.25□□□□□ -1.09
CTNNA1-218ENST00000519768 TCOF1Q13428 1488 aaKnown RBP8.25□□□□□ -1.09
CTNNA1-218ENST00000519768 ZMYM3Q14202 1370 aa8.24□□□□□ -1.09
CTNNA1-218ENST00000519768 SAMD9Q5K651 1589 aa8.24□□□□□ -1.09
CTNNA1-218ENST00000519768 MS4A1P11836 297 aa8.24□□□□□ -1.09
CTNNA1-218ENST00000519768 CD46P15529 392 aa8.24□□□□□ -1.09
CTNNA1-218ENST00000519768 THSD4Q6ZMP0 1018 aa8.24□□□□□ -1.09
CTNNA1-218ENST00000519768 TSR3Q9UJK0 312 aaKnown RBP8.24□□□□□ -1.09
CTNNA1-218ENST00000519768 ABCA6Q8N139 1617 aa8.24□□□□□ -1.09
CTNNA1-218ENST00000519768 CDK13Q14004 1512 aaKnown RBP8.24□□□□□ -1.09
CTNNA1-218ENST00000519768 SLC10A3P09131 477 aa8.23□□□□□ -1.09
CTNNA1-218ENST00000519768 BCAMP50895 628 aa8.23□□□□□ -1.09
CTNNA1-218ENST00000519768 CFAP74Q9C0B2 1584 aa8.22□□□□□ -1.09
CTNNA1-218ENST00000519768 RNF40O75150 1001 aa8.22□□□□□ -1.09
CTNNA1-218ENST00000519768 PPP4CP60510 307 aa8.22□□□□□ -1.09
CTNNA1-218ENST00000519768 EFCAB2Q5VUJ9 269 aa8.22□□□□□ -1.09
CTNNA1-218ENST00000519768 RDH13Q8NBN7 331 aa8.22□□□□□ -1.09
CTNNA1-218ENST00000519768 DDRGK1Q96HY6 314 aa8.22□□□□□ -1.09
CTNNA1-218ENST00000519768 HPS5Q9UPZ3 1129 aa8.22□□□□□ -1.09
CTNNA1-218ENST00000519768 SHANK2Q9UPX8 1470 aa8.21□□□□□ -1.09
CTNNA1-218ENST00000519768 BEGAINQ9BUH8 593 aa8.21□□□□□ -1.1
CTNNA1-218ENST00000519768 KDM5CP41229 1560 aa8.2□□□□□ -1.1
CTNNA1-218ENST00000519768 GCGRP47871 477 aa8.2□□□□□ -1.1
CTNNA1-218ENST00000519768 NYAP1Q6ZVC0 841 aa8.2□□□□□ -1.1
CTNNA1-218ENST00000519768 FAM117AQ9C073 453 aa8.2□□□□□ -1.1
CTNNA1-218ENST00000519768 ESF1Q9H501 851 aaKnown RBP8.2□□□□□ -1.1
CTNNA1-218ENST00000519768 STRCP1A6NGW2 1772 aa8.2□□□□□ -1.1
CTNNA1-218ENST00000519768 PTPRKQ15262 1439 aa8.2□□□□□ -1.1
CTNNA1-218ENST00000519768 NEURL4Q96JN8 1562 aa8.19□□□□□ -1.1
CTNNA1-218ENST00000519768 LAPTM4AQ15012 233 aa8.19□□□□□ -1.1
CTNNA1-218ENST00000519768 FBXO31Q5XUX0 539 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-218ENST00000519768 PRR14Q9BWN1 585 aa8.19□□□□□ -1.1
CTNNA1-218ENST00000519768 PLA2R1Q13018 1463 aa8.19□□□□□ -1.1
CTNNA1-218ENST00000519768 AGLP35573 1532 aa8.19□□□□□ -1.1
CTNNA1-218ENST00000519768 VWDEQ8N2E2 1590 aa8.18□□□□□ -1.1
CTNNA1-218ENST00000519768 KIF14Q15058 1648 aa8.18□□□□□ -1.1
CTNNA1-218ENST00000519768 CFHP08603 1231 aa8.18□□□□□ -1.1
CTNNA1-218ENST00000519768 DIXDC1Q155Q3 683 aa8.18□□□□□ -1.1
CTNNA1-218ENST00000519768 KMT5BQ4FZB7 885 aa8.18□□□□□ -1.1
CTNNA1-218ENST00000519768 WBP1LQ9NX94 342 aa8.18□□□□□ -1.1
CTNNA1-218ENST00000519768 NPATQ14207 1427 aa8.18□□□□□ -1.1
CTNNA1-218ENST00000519768 FAM9AQ8IZU1 332 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-218ENST00000519768 ZNF518AQ6AHZ1 1483 aa8.17□□□□□ -1.1
CTNNA1-218ENST00000519768 MLH3Q9UHC1 1453 aa8.17□□□□□ -1.1
CTNNA1-218ENST00000519768 REREQ9P2R6 1566 aa8.17□□□□□ -1.1
CTNNA1-218ENST00000519768 CEP170BQ9Y4F5 1589 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-218ENST00000519768 MYO3AQ8NEV4 1616 aa8.17□□□□□ -1.1
CTNNA1-218ENST00000519768 KIDINS220Q9ULH0 1771 aa8.17□□□□□ -1.1
CTNNA1-218ENST00000519768 PLEKHG3A1L390 1219 aa8.16□□□□□ -1.1
CTNNA1-218ENST00000519768 ACTN4O43707 911 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-218ENST00000519768 KDM4AO75164 1064 aa8.16□□□□□ -1.1
CTNNA1-218ENST00000519768 DNMT1P26358 1616 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-218ENST00000519768 USP46P62068 366 aa8.16□□□□□ -1.1
CTNNA1-218ENST00000519768 CLTCQ00610 1675 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-218ENST00000519768 SUPT6HQ7KZ85 1726 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms