RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 LTKP29376 864 aa10.99□□□□□ -0.65
HMGB4-203ENST00000519684 CCDC27Q2M243 656 aa10.99□□□□□ -0.65
HMGB4-203ENST00000519684 NCBP3Q53F19 620 aaKnown RBP10.99□□□□□ -0.65
HMGB4-203ENST00000519684 WDR63Q8IWG1 891 aa10.99□□□□□ -0.65
HMGB4-203ENST00000519684 SPINK5Q9NQ38 1064 aaPredicted RBP10.99□□□□□ -0.65
HMGB4-203ENST00000519684 RRP7AQ9Y3A4 280 aaKnown RBP10.99□□□□□ -0.65
HMGB4-203ENST00000519684 ARHGAP23Q9P227 1491 aa10.99□□□□□ -0.65
HMGB4-203ENST00000519684 PNNQ9H307 717 aaKnown RBP10.98□□□□□ -0.65
HMGB4-203ENST00000519684 CCDC61Q9Y6R9 512 aa10.98□□□□□ -0.65
HMGB4-203ENST00000519684 ROBO2Q9HCK4 1378 aa10.98□□□□□ -0.65
HMGB4-203ENST00000519684 DIP2AQ14689 1571 aa10.98□□□□□ -0.65
HMGB4-203ENST00000519684 MAPK8IP3Q9UPT6 1336 aa10.98□□□□□ -0.65
HMGB4-203ENST00000519684 DIAPH1O60610 1272 aaKnown RBP10.98□□□□□ -0.65
HMGB4-203ENST00000519684 THEMISQ8N1K5 641 aaPredicted RBP10.98□□□□□ -0.65
HMGB4-203ENST00000519684 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.97□□□□□ -0.65
HMGB4-203ENST00000519684 DMRT2Q9Y5R5 561 aa10.97□□□□□ -0.65
HMGB4-203ENST00000519684 PHF23Q9BUL5 403 aaPredicted RBP10.96□□□□□ -0.65
HMGB4-203ENST00000519684 TOPAZ1Q8N9V7 1692 aa10.96□□□□□ -0.65
HMGB4-203ENST00000519684 PNPLA6Q8IY17 1366 aa10.96□□□□□ -0.66
HMGB4-203ENST00000519684 SLC26A8Q96RN1 970 aa10.96□□□□□ -0.66
HMGB4-203ENST00000519684 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.66
HMGB4-203ENST00000519684 MYH16Q9H6N6 1097 aa10.96□□□□□ -0.66
HMGB4-203ENST00000519684 MAP2P11137 1827 aaKnown RBP10.95□□□□□ -0.66
HMGB4-203ENST00000519684 C20orf194Q5TEA3 1177 aa10.95□□□□□ -0.66
HMGB4-203ENST00000519684 RIMS1Q86UR5 1692 aaKnown RBP10.95□□□□□ -0.66
HMGB4-203ENST00000519684 PPM1GO15355 546 aaPredicted RBP10.95□□□□□ -0.66
HMGB4-203ENST00000519684 NEFMP07197 916 aa10.95□□□□□ -0.66
HMGB4-203ENST00000519684 COG3Q96JB2 828 aa10.95□□□□□ -0.66
HMGB4-203ENST00000519684 TBX22Q9Y458 520 aa10.95□□□□□ -0.66
HMGB4-203ENST00000519684 CANXP27824 592 aaKnown RBP10.94□□□□□ -0.66
HMGB4-203ENST00000519684 NME9Q86XW9 330 aa10.94□□□□□ -0.66
HMGB4-203ENST00000519684 CEP170BQ9Y4F5 1589 aaPredicted RBP10.94□□□□□ -0.66
HMGB4-203ENST00000519684 PTCH1Q13635 1447 aa10.94□□□□□ -0.66
HMGB4-203ENST00000519684 PTPRUQ92729 1446 aa10.94□□□□□ -0.66
HMGB4-203ENST00000519684 PLEKHF1Q96S99 279 aa10.93□□□□□ -0.66
HMGB4-203ENST00000519684 POLKQ9UBT6 870 aa10.93□□□□□ -0.66
HMGB4-203ENST00000519684 PRR36Q9H6K5 1346 aa10.93□□□□□ -0.66
HMGB4-203ENST00000519684 CDK12Q9NYV4 1490 aaPredicted RBP10.93□□□□□ -0.66
HMGB4-203ENST00000519684 BCAR3O75815 825 aa10.93□□□□□ -0.66
HMGB4-203ENST00000519684 AMOTL2Q9Y2J4 779 aa10.93□□□□□ -0.66
HMGB4-203ENST00000519684 AATKQ6ZMQ8 1374 aa10.93□□□□□ -0.66
HMGB4-203ENST00000519684 NRKQ7Z2Y5 1582 aa10.93□□□□□ -0.66
HMGB4-203ENST00000519684 TMPOP42166 694 aaKnown RBP10.92□□□□□ -0.66
HMGB4-203ENST00000519684 NCKAP5LQ9HCH0 1330 aa10.92□□□□□ -0.66
HMGB4-203ENST00000519684 LRRC7Q96NW7 1537 aa10.92□□□□□ -0.66
HMGB4-203ENST00000519684 FANCIQ9NVI1 1328 aa10.92□□□□□ -0.66
HMGB4-203ENST00000519684 TCERG1O14776 1098 aaKnown RBP10.91□□□□□ -0.66
HMGB4-203ENST00000519684 FCHSD2O94868 740 aa10.91□□□□□ -0.66
HMGB4-203ENST00000519684 XRN1Q8IZH2 1706 aaKnown RBP10.91□□□□□ -0.66
HMGB4-203ENST00000519684 PLEKHG3A1L390 1219 aa10.9□□□□□ -0.66
HMGB4-203ENST00000519684 PDE3AQ14432 1141 aa10.9□□□□□ -0.66
HMGB4-203ENST00000519684 ACEP12821 1306 aa10.9□□□□□ -0.67
HMGB4-203ENST00000519684 IL16Q14005 1332 aa10.9□□□□□ -0.67
HMGB4-203ENST00000519684 RIPK4P57078 832 aa10.9□□□□□ -0.67
HMGB4-203ENST00000519684 ZRANB1Q9UGI0 708 aa10.9□□□□□ -0.67
HMGB4-203ENST00000519684 EMILIN1Q9Y6C2 1016 aa10.9□□□□□ -0.67
HMGB4-203ENST00000519684 ZNF142P52746 1687 aaPredicted RBP10.89□□□□□ -0.67
HMGB4-203ENST00000519684 TTC21BQ7Z4L5 1316 aa10.89□□□□□ -0.67
HMGB4-203ENST00000519684 NUTM2FA1L443 756 aa10.89□□□□□ -0.67
HMGB4-203ENST00000519684 CT47B1P0C2W7 299 aaPredicted RBP10.89□□□□□ -0.67
HMGB4-203ENST00000519684 RARSP54136 660 aaKnown RBP10.89□□□□□ -0.67
HMGB4-203ENST00000519684 CENPQQ7L2Z9 268 aaPredicted RBP10.89□□□□□ -0.67
HMGB4-203ENST00000519684 USP6P35125 1406 aa10.89□□□□□ -0.67
HMGB4-203ENST00000519684 FBLN1P23142 703 aa10.89□□□□□ -0.67
HMGB4-203ENST00000519684 PRKAR2BP31323 418 aa10.89□□□□□ -0.67
HMGB4-203ENST00000519684 RSPH6AQ9H0K4 717 aa10.89□□□□□ -0.67
HMGB4-203ENST00000519684 TRIM35Q9UPQ4 493 aa10.89□□□□□ -0.67
HMGB4-203ENST00000519684 PIK3R4Q99570 1358 aa10.88□□□□□ -0.67
HMGB4-203ENST00000519684 FRAT1Q92837 279 aaPredicted RBP10.88□□□□□ -0.67
HMGB4-203ENST00000519684 MS4A1P11836 297 aa10.87□□□□□ -0.67
HMGB4-203ENST00000519684 NALCNQ8IZF0 1738 aa10.87□□□□□ -0.67
HMGB4-203ENST00000519684 ADAMTSL3P82987 1691 aa10.87□□□□□ -0.67
HMGB4-203ENST00000519684 IL13P35225 146 aa10.87□□□□□ -0.67
HMGB4-203ENST00000519684 KDM2BQ8NHM5 1336 aa10.87□□□□□ -0.67
HMGB4-203ENST00000519684 RRS1Q15050 365 aaKnown RBP10.86□□□□□ -0.67
HMGB4-203ENST00000519684 OVOS2A0A0J9YW53 1432 aa10.86□□□□□ -0.67
HMGB4-203ENST00000519684 OVOS2Q6IE36 1432 aa10.86□□□□□ -0.67
HMGB4-203ENST00000519684 TTC21AQ8NDW8 1320 aa10.86□□□□□ -0.67
HMGB4-203ENST00000519684 HMOX1P09601 288 aa10.86□□□□□ -0.67
HMGB4-203ENST00000519684 CALD1Q05682 793 aaKnown RBP10.86□□□□□ -0.67
HMGB4-203ENST00000519684 NFE2L2Q16236 605 aa10.86□□□□□ -0.67
HMGB4-203ENST00000519684 TSR2Q969E8 191 aaKnown RBP10.86□□□□□ -0.67
HMGB4-203ENST00000519684 RGPD8O14715 1765 aaPredicted RBP10.86□□□□□ -0.67
HMGB4-203ENST00000519684 ANKARQ7Z5J8 1434 aa10.85□□□□□ -0.67
HMGB4-203ENST00000519684 ANKLE2Q86XL3 938 aa10.85□□□□□ -0.67
HMGB4-203ENST00000519684 FMN2Q9NZ56 1722 aa10.85□□□□□ -0.67
HMGB4-203ENST00000519684 EXOSC9Q06265 439 aaKnown RBP10.85□□□□□ -0.67
HMGB4-203ENST00000519684 AAMPQ13685 434 aa10.85□□□□□ -0.67
HMGB4-203ENST00000519684 NGDNQ8NEJ9 315 aaKnown RBP10.85□□□□□ -0.67
HMGB4-203ENST00000519684 PANK1Q8TE04 598 aa10.85□□□□□ -0.67
HMGB4-203ENST00000519684 LMOD3Q0VAK6 560 aa10.84□□□□□ -0.67
HMGB4-203ENST00000519684 BCL2L13Q9BXK5 485 aa10.84□□□□□ -0.67
HMGB4-203ENST00000519684 COG6Q9Y2V7 657 aa10.84□□□□□ -0.67
HMGB4-203ENST00000519684 KCNA6P17658 529 aa10.84□□□□□ -0.67
HMGB4-203ENST00000519684 PMFBP1Q8TBY8 1022 aa10.84□□□□□ -0.67
HMGB4-203ENST00000519684 CHD2O14647 1828 aaKnown RBP10.83□□□□□ -0.68
HMGB4-203ENST00000519684 ZKSCAN2Q63HK3 967 aa10.83□□□□□ -0.68
HMGB4-203ENST00000519684 CLUAP1Q96AJ1 413 aa10.83□□□□□ -0.68
HMGB4-203ENST00000519684 SMC4Q9NTJ3 1288 aa10.83□□□□□ -0.68
HMGB4-203ENST00000519684 SSH2Q76I76 1423 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms