RNA–Protein interactions for RNA: ENST00000519575.5

PDGFRB-205, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 712 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-205ENST00000519575 NALCNQ8IZF0 1738 aa13.31□□□□□ -0.28
PDGFRB-205ENST00000519575 NEFMP07197 916 aa13.31□□□□□ -0.28
PDGFRB-205ENST00000519575 GOLGA2Q08379 1002 aa13.31□□□□□ -0.28
PDGFRB-205ENST00000519575 GGNBP2Q9H3C7 697 aa13.31□□□□□ -0.28
PDGFRB-205ENST00000519575 MAP2P11137 1827 aaKnown RBP13.31□□□□□ -0.28
PDGFRB-205ENST00000519575 PNPLA6Q8IY17 1366 aa13.31□□□□□ -0.28
PDGFRB-205ENST00000519575 USP54Q70EL1 1684 aa13.31□□□□□ -0.28
PDGFRB-205ENST00000519575 COL3A1P02461 1466 aaPredicted RBP13.3□□□□□ -0.28
PDGFRB-205ENST00000519575 ADGRL3Q9HAR2 1447 aa13.3□□□□□ -0.28
PDGFRB-205ENST00000519575 IQSEC2Q5JU85 1478 aa13.29□□□□□ -0.28
PDGFRB-205ENST00000519575 E9PSI1 815 aa13.29□□□□□ -0.28
PDGFRB-205ENST00000519575 TNNT2P45379 298 aaPredicted RBP13.29□□□□□ -0.28
PDGFRB-205ENST00000519575 CCDC27Q2M243 656 aa13.29□□□□□ -0.28
PDGFRB-205ENST00000519575 ZNF521Q96K83 1311 aa13.29□□□□□ -0.28
PDGFRB-205ENST00000519575 RCAN3Q9UKA8 241 aa13.28□□□□□ -0.28
PDGFRB-205ENST00000519575 PRR36Q9H6K5 1346 aa13.28□□□□□ -0.28
PDGFRB-205ENST00000519575 DIAPH1O60610 1272 aaKnown RBP13.27□□□□□ -0.29
PDGFRB-205ENST00000519575 KCNA6P17658 529 aa13.27□□□□□ -0.29
PDGFRB-205ENST00000519575 PPP4R2Q9NY27 417 aa13.27□□□□□ -0.29
PDGFRB-205ENST00000519575 MAPK8IP3Q9UPT6 1336 aa13.27□□□□□ -0.29
PDGFRB-205ENST00000519575 NCOA3Q9Y6Q9 1424 aa13.27□□□□□ -0.29
PDGFRB-205ENST00000519575 OVOS2A0A0J9YW53 1432 aa13.26□□□□□ -0.29
PDGFRB-205ENST00000519575 U2AF1L5P0DN76 240 aaPredicted RBP13.26□□□□□ -0.29
PDGFRB-205ENST00000519575 ACEP12821 1306 aa13.26□□□□□ -0.29
PDGFRB-205ENST00000519575 U2AF1Q01081 240 aaKnown RBP eCLIP13.26□□□□□ -0.29
PDGFRB-205ENST00000519575 OVOS2Q6IE36 1432 aa13.26□□□□□ -0.29
PDGFRB-205ENST00000519575 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.26□□□□□ -0.29
PDGFRB-205ENST00000519575 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.26□□□□□ -0.29
PDGFRB-205ENST00000519575 KIF1AQ12756 1690 aa13.25□□□□□ -0.29
PDGFRB-205ENST00000519575 KIF24Q5T7B8 1368 aa13.25□□□□□ -0.29
PDGFRB-205ENST00000519575 TTC21BQ7Z4L5 1316 aa13.25□□□□□ -0.29
PDGFRB-205ENST00000519575 APAF1O14727 1248 aa13.25□□□□□ -0.29
PDGFRB-205ENST00000519575 WDR63Q8IWG1 891 aa13.25□□□□□ -0.29
PDGFRB-205ENST00000519575 RGPD8O14715 1765 aaPredicted RBP13.25□□□□□ -0.29
PDGFRB-205ENST00000519575 SSH2Q76I76 1423 aa13.24□□□□□ -0.29
PDGFRB-205ENST00000519575 USP31Q70CQ4 1352 aa13.24□□□□□ -0.29
PDGFRB-205ENST00000519575 NGDNQ8NEJ9 315 aaKnown RBP13.24□□□□□ -0.29
PDGFRB-205ENST00000519575 DCCP43146 1447 aa13.23□□□□□ -0.29
PDGFRB-205ENST00000519575 FCHSD2O94868 740 aa13.23□□□□□ -0.29
PDGFRB-205ENST00000519575 RRP1P56182 461 aaKnown RBP13.22□□□□□ -0.29
PDGFRB-205ENST00000519575 CALD1Q05682 793 aaKnown RBP13.22□□□□□ -0.29
PDGFRB-205ENST00000519575 SLFN5Q08AF3 891 aa13.22□□□□□ -0.29
PDGFRB-205ENST00000519575 CCDC146Q8IYE0 955 aa13.22□□□□□ -0.29
PDGFRB-205ENST00000519575 MYH16Q9H6N6 1097 aa13.22□□□□□ -0.29
PDGFRB-205ENST00000519575 SALL2Q9Y467 1007 aaPredicted RBP13.22□□□□□ -0.29
PDGFRB-205ENST00000519575 U2SURPO15042 1029 aaKnown RBP13.21□□□□□ -0.29
PDGFRB-205ENST00000519575 CT47B1P0C2W7 299 aaPredicted RBP13.21□□□□□ -0.29
PDGFRB-205ENST00000519575 NME9Q86XW9 330 aa13.21□□□□□ -0.29
PDGFRB-205ENST00000519575 TCP11L2Q8N4U5 519 aa13.21□□□□□ -0.29
PDGFRB-205ENST00000519575 POLKQ9UBT6 870 aa13.21□□□□□ -0.29
PDGFRB-205ENST00000519575 IL16Q14005 1332 aa13.2□□□□□ -0.3
PDGFRB-205ENST00000519575 LMOD3Q0VAK6 560 aa13.2□□□□□ -0.3
PDGFRB-205ENST00000519575 DUSP27Q5VZP5 1158 aa13.2□□□□□ -0.3
PDGFRB-205ENST00000519575 WWC1Q8IX03 1113 aa13.2□□□□□ -0.3
PDGFRB-205ENST00000519575 TRMT2AQ8IZ69 625 aaKnown RBP13.2□□□□□ -0.3
PDGFRB-205ENST00000519575 PHF23Q9BUL5 403 aaPredicted RBP13.2□□□□□ -0.3
PDGFRB-205ENST00000519575 PIK3C2AO00443 1686 aa13.2□□□□□ -0.3
PDGFRB-205ENST00000519575 C14orf37Q86TY3 774 aa13.18□□□□□ -0.3
PDGFRB-205ENST00000519575 RTL1A6NKG5 1358 aa13.18□□□□□ -0.3
PDGFRB-205ENST00000519575 FLT4P35916 1363 aa13.18□□□□□ -0.3
PDGFRB-205ENST00000519575 CDCA7LQ96GN5 454 aa13.17□□□□□ -0.3
PDGFRB-205ENST00000519575 PHF8Q9UPP1 1060 aa13.17□□□□□ -0.3
PDGFRB-205ENST00000519575 SBNO1A3KN83 1393 aa13.17□□□□□ -0.3
PDGFRB-205ENST00000519575 PPM1GO15355 546 aaPredicted RBP13.16□□□□□ -0.3
PDGFRB-205ENST00000519575 PHRF1Q9P1Y6 1649 aaKnown RBP13.15□□□□□ -0.3
PDGFRB-205ENST00000519575 PLEKHF1Q96S99 279 aa13.15□□□□□ -0.3
PDGFRB-205ENST00000519575 NCKAP5LQ9HCH0 1330 aa13.14□□□□□ -0.31
PDGFRB-205ENST00000519575 RGPD1P0DJD0 1748 aa13.14□□□□□ -0.31
PDGFRB-205ENST00000519575 TMPOP42166 694 aaKnown RBP13.14□□□□□ -0.31
PDGFRB-205ENST00000519575 AAMPQ13685 434 aa13.14□□□□□ -0.31
PDGFRB-205ENST00000519575 PROSER2Q86WR7 435 aaPredicted RBP13.14□□□□□ -0.31
PDGFRB-205ENST00000519575 C19orf44Q9H6X5 657 aa13.14□□□□□ -0.31
PDGFRB-205ENST00000519575 ARHGEF10O15013 1369 aa13.14□□□□□ -0.31
PDGFRB-205ENST00000519575 NUTM2FA1L443 756 aa13.13□□□□□ -0.31
PDGFRB-205ENST00000519575 IL13P35225 146 aa13.13□□□□□ -0.31
PDGFRB-205ENST00000519575 KCNH5Q8NCM2 988 aa13.13□□□□□ -0.31
PDGFRB-205ENST00000519575 PMFBP1Q8TBY8 1022 aa13.13□□□□□ -0.31
PDGFRB-205ENST00000519575 RSPH6AQ9H0K4 717 aa13.13□□□□□ -0.31
PDGFRB-205ENST00000519575 EMILIN1Q9Y6C2 1016 aa13.13□□□□□ -0.31
PDGFRB-205ENST00000519575 MS4A1P11836 297 aa13.12□□□□□ -0.31
PDGFRB-205ENST00000519575 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
PDGFRB-205ENST00000519575 ZNF428Q96B54 188 aa13.12□□□□□ -0.31
PDGFRB-205ENST00000519575 CCDC136Q96JN2 1154 aa13.12□□□□□ -0.31
PDGFRB-205ENST00000519575 MARF1Q9Y4F3 1742 aaKnown RBP13.12□□□□□ -0.31
PDGFRB-205ENST00000519575 PRKAR2BP31323 418 aa13.11□□□□□ -0.31
PDGFRB-205ENST00000519575 NLRP6P59044 892 aa13.11□□□□□ -0.31
PDGFRB-205ENST00000519575 IRX6P78412 446 aaPredicted RBP13.11□□□□□ -0.31
PDGFRB-205ENST00000519575 NFE2L2Q16236 605 aa13.11□□□□□ -0.31
PDGFRB-205ENST00000519575 MST1RQ04912 1400 aa13.11□□□□□ -0.31
PDGFRB-205ENST00000519575 PEAK1Q9H792 1746 aa13.1□□□□□ -0.31
PDGFRB-205ENST00000519575 LMTK3Q96Q04 1460 aa13.1□□□□□ -0.31
PDGFRB-205ENST00000519575 LTN1O94822 1766 aa13.1□□□□□ -0.31
PDGFRB-205ENST00000519575 ATF3P18847 181 aa13.1□□□□□ -0.31
PDGFRB-205ENST00000519575 RIPK4P57078 832 aa13.1□□□□□ -0.31
PDGFRB-205ENST00000519575 PSME1Q06323 249 aa13.1□□□□□ -0.31
PDGFRB-205ENST00000519575 NEUROD2Q15784 382 aa13.1□□□□□ -0.31
PDGFRB-205ENST00000519575 CADPS2Q86UW7 1296 aa13.1□□□□□ -0.31
PDGFRB-205ENST00000519575 MSH6P52701 1360 aa13.09□□□□□ -0.31
PDGFRB-205ENST00000519575 SENP3-EIF4A1A0A087X0R7 540 aa13.09□□□□□ -0.31
PDGFRB-205ENST00000519575 AMPHP49418 695 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms