RNA–Protein interactions for RNA: ENST00000519052.5

SFTA3-206, Transcript of surfactant associated 3, humanhuman

TSL 2

Gene SFTA3, Length 1,796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTA3-206ENST00000519052 USP54Q70EL1 1684 aa11.73□□□□□ -0.53
SFTA3-206ENST00000519052 PXDNQ92626 1479 aa11.72□□□□□ -0.53
SFTA3-206ENST00000519052 MARF1Q9Y4F3 1742 aaKnown RBP11.72□□□□□ -0.53
SFTA3-206ENST00000519052 PIK3C2AO00443 1686 aa11.72□□□□□ -0.53
SFTA3-206ENST00000519052 BRINP3Q76B58 766 aa11.72□□□□□ -0.53
SFTA3-206ENST00000519052 ABCA3Q99758 1704 aa11.71□□□□□ -0.53
SFTA3-206ENST00000519052 CRYBG1Q9Y4K1 1723 aa11.71□□□□□ -0.53
SFTA3-206ENST00000519052 CPSF1Q10570 1443 aaKnown RBP11.71□□□□□ -0.53
SFTA3-206ENST00000519052 ANKRD36BQ8N2N9 1353 aa11.71□□□□□ -0.53
SFTA3-206ENST00000519052 ESCO1Q5FWF5 840 aa11.71□□□□□ -0.54
SFTA3-206ENST00000519052 ORAI2Q96SN7 254 aa11.71□□□□□ -0.54
SFTA3-206ENST00000519052 PHF8Q9UPP1 1060 aa11.71□□□□□ -0.54
SFTA3-206ENST00000519052 A0A1W2PP64 1363 aa11.7□□□□□ -0.54
SFTA3-206ENST00000519052 USP6P35125 1406 aa11.7□□□□□ -0.54
SFTA3-206ENST00000519052 SHPRHQ149N8 1683 aa11.7□□□□□ -0.54
SFTA3-206ENST00000519052 PLEKHG3A1L390 1219 aa11.69□□□□□ -0.54
SFTA3-206ENST00000519052 POLR3GLQ9BT43 218 aa11.69□□□□□ -0.54
SFTA3-206ENST00000519052 VASPP50552 380 aaPredicted RBP11.69□□□□□ -0.54
SFTA3-206ENST00000519052 CABP1Q9NZU7 370 aa11.69□□□□□ -0.54
SFTA3-206ENST00000519052 COL22A1Q8NFW1 1626 aaPredicted RBP11.68□□□□□ -0.54
SFTA3-206ENST00000519052 ACEP12821 1306 aa11.68□□□□□ -0.54
SFTA3-206ENST00000519052 NPHP3Q7Z494 1330 aa11.68□□□□□ -0.54
SFTA3-206ENST00000519052 ZNF316A6NFI3 1004 aaPredicted RBP11.68□□□□□ -0.54
SFTA3-206ENST00000519052 IFNLR1Q8IU57 520 aaPredicted RBP11.68□□□□□ -0.54
SFTA3-206ENST00000519052 PMFBP1Q8TBY8 1022 aa11.68□□□□□ -0.54
SFTA3-206ENST00000519052 TMC1Q8TDI8 760 aa11.68□□□□□ -0.54
SFTA3-206ENST00000519052 PHRF1Q9P1Y6 1649 aaKnown RBP11.68□□□□□ -0.54
SFTA3-206ENST00000519052 MED1Q15648 1581 aaPredicted RBP11.68□□□□□ -0.54
SFTA3-206ENST00000519052 SLC12A5Q9H2X9 1139 aa11.67□□□□□ -0.54
SFTA3-206ENST00000519052 EDC4Q6P2E9 1401 aaKnown RBP11.67□□□□□ -0.54
SFTA3-206ENST00000519052 SSH2Q76I76 1423 aa11.67□□□□□ -0.54
SFTA3-206ENST00000519052 PIP4K2BP78356 416 aa11.67□□□□□ -0.54
SFTA3-206ENST00000519052 BRD4O60885 1362 aaPredicted RBP11.66□□□□□ -0.54
SFTA3-206ENST00000519052 KTN1Q86UP2 1357 aaKnown RBP11.66□□□□□ -0.54
SFTA3-206ENST00000519052 TNS3Q68CZ2 1445 aa11.66□□□□□ -0.54
SFTA3-206ENST00000519052 NGDNQ8NEJ9 315 aaKnown RBP11.66□□□□□ -0.54
SFTA3-206ENST00000519052 TERF2IPQ9NYB0 399 aa11.66□□□□□ -0.54
SFTA3-206ENST00000519052 NSD3Q9BZ95 1437 aa11.65□□□□□ -0.54
SFTA3-206ENST00000519052 HDGFL2Q7Z4V5 671 aaPredicted RBP11.65□□□□□ -0.54
SFTA3-206ENST00000519052 SOS2Q07890 1332 aaPredicted RBP11.65□□□□□ -0.54
SFTA3-206ENST00000519052 FOXO3O43524 673 aa11.64□□□□□ -0.55
SFTA3-206ENST00000519052 SBNO1A3KN83 1393 aa11.64□□□□□ -0.55
SFTA3-206ENST00000519052 SPDYE4A6NLX3 237 aa11.64□□□□□ -0.55
SFTA3-206ENST00000519052 DDX17Q92841 729 aaKnown RBP11.64□□□□□ -0.55
SFTA3-206ENST00000519052 ZNF692Q9BU19 519 aaPredicted RBP11.64□□□□□ -0.55
SFTA3-206ENST00000519052 LTN1O94822 1766 aa11.63□□□□□ -0.55
SFTA3-206ENST00000519052 SAMD1Q6SPF0 538 aaPredicted RBP11.63□□□□□ -0.55
SFTA3-206ENST00000519052 XPCQ01831 940 aaPredicted RBP11.62□□□□□ -0.55
SFTA3-206ENST00000519052 PSME1Q06323 249 aa11.62□□□□□ -0.55
SFTA3-206ENST00000519052 FBXO41Q8TF61 875 aa11.62□□□□□ -0.55
SFTA3-206ENST00000519052 TTC21AQ8NDW8 1320 aa11.61□□□□□ -0.55
SFTA3-206ENST00000519052 SLIT3O75094 1523 aa11.61□□□□□ -0.55
SFTA3-206ENST00000519052 KRT28Q7Z3Y7 464 aa11.61□□□□□ -0.55
SFTA3-206ENST00000519052 PROM2Q8N271 834 aa11.61□□□□□ -0.55
SFTA3-206ENST00000519052 PANK3Q9H999 370 aa11.61□□□□□ -0.55
SFTA3-206ENST00000519052 OVOS2A0A0J9YW53 1432 aa11.61□□□□□ -0.55
SFTA3-206ENST00000519052 OVOS2Q6IE36 1432 aa11.61□□□□□ -0.55
SFTA3-206ENST00000519052 TTC21BQ7Z4L5 1316 aa11.61□□□□□ -0.55
SFTA3-206ENST00000519052 ARHGEF10O15013 1369 aa11.6□□□□□ -0.55
SFTA3-206ENST00000519052 CARD14Q9BXL6 1004 aa11.6□□□□□ -0.55
SFTA3-206ENST00000519052 SPATA31A3Q5VYP0 1347 aa11.6□□□□□ -0.55
SFTA3-206ENST00000519052 NSD2O96028 1365 aa11.6□□□□□ -0.55
SFTA3-206ENST00000519052 MAP2P11137 1827 aaKnown RBP11.59□□□□□ -0.55
SFTA3-206ENST00000519052 PNPLA6Q8IY17 1366 aa11.58□□□□□ -0.56
SFTA3-206ENST00000519052 NFAT5O94916 1531 aa11.58□□□□□ -0.56
SFTA3-206ENST00000519052 CGNL1Q0VF96 1302 aa11.58□□□□□ -0.56
SFTA3-206ENST00000519052 USP31Q70CQ4 1352 aa11.58□□□□□ -0.56
SFTA3-206ENST00000519052 PAK3O75914 559 aaPredicted RBP11.57□□□□□ -0.56
SFTA3-206ENST00000519052 HSPA1LP34931 641 aa11.57□□□□□ -0.56
SFTA3-206ENST00000519052 DDX10Q13206 875 aaKnown RBP11.57□□□□□ -0.56
SFTA3-206ENST00000519052 ZNF219Q9P2Y4 722 aaPredicted RBP11.57□□□□□ -0.56
SFTA3-206ENST00000519052 U3KPZ7 1027 aaPredicted RBP11.57□□□□□ -0.56
SFTA3-206ENST00000519052 JCADQ9P266 1359 aa11.57□□□□□ -0.56
SFTA3-206ENST00000519052 NPC1L1Q9UHC9 1359 aa11.57□□□□□ -0.56
SFTA3-206ENST00000519052 PER1O15534 1290 aaPredicted RBP11.56□□□□□ -0.56
SFTA3-206ENST00000519052 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.56□□□□□ -0.56
SFTA3-206ENST00000519052 LRRC59Q96AG4 307 aaKnown RBP11.56□□□□□ -0.56
SFTA3-206ENST00000519052 PLCH1Q4KWH8 1693 aa11.56□□□□□ -0.56
SFTA3-206ENST00000519052 NME9Q86XW9 330 aa11.56□□□□□ -0.56
SFTA3-206ENST00000519052 KNSTRNQ9Y448 316 aa11.56□□□□□ -0.56
SFTA3-206ENST00000519052 USP19O94966 1318 aa11.56□□□□□ -0.56
SFTA3-206ENST00000519052 RGPD5Q99666 1765 aa11.55□□□□□ -0.56
SFTA3-206ENST00000519052 ABTB2Q8N961 1025 aa11.55□□□□□ -0.56
SFTA3-206ENST00000519052 ABCC6O95255 1503 aa11.54□□□□□ -0.56
SFTA3-206ENST00000519052 COL18A1P39060 1754 aa11.54□□□□□ -0.56
SFTA3-206ENST00000519052 COL14A1Q05707 1796 aaKnown RBP11.54□□□□□ -0.56
SFTA3-206ENST00000519052 PEAK1Q9H792 1746 aa11.54□□□□□ -0.56
SFTA3-206ENST00000519052 NWD2Q9ULI1 1742 aa11.54□□□□□ -0.56
SFTA3-206ENST00000519052 LMO7Q8WWI1 1683 aa11.54□□□□□ -0.56
SFTA3-206ENST00000519052 FYB1O15117 783 aa11.54□□□□□ -0.56
SFTA3-206ENST00000519052 LMOD2Q6P5Q4 547 aa11.53□□□□□ -0.56
SFTA3-206ENST00000519052 NRAPQ86VF7 1730 aa11.53□□□□□ -0.56
SFTA3-206ENST00000519052 LRP6O75581 1613 aa11.53□□□□□ -0.56
SFTA3-206ENST00000519052 NLRP6P59044 892 aa11.52□□□□□ -0.57
SFTA3-206ENST00000519052 NLRP13Q86W25 1043 aa11.52□□□□□ -0.57
SFTA3-206ENST00000519052 GGNBP2Q9H3C7 697 aa11.52□□□□□ -0.57
SFTA3-206ENST00000519052 FAM208AQ9UK61 1670 aaKnown RBP11.52□□□□□ -0.57
SFTA3-206ENST00000519052 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.52□□□□□ -0.57
SFTA3-206ENST00000519052 MKRN4PQ13434 485 aaPredicted RBP11.51□□□□□ -0.57
SFTA3-206ENST00000519052 NUTM2GQ5VZR2 741 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms