RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 ARHGEF10O15013 1369 aa12.96□□□□□ -0.33
CLN8-203ENST00000518780 NSD2O96028 1365 aa12.96□□□□□ -0.33
CLN8-203ENST00000518780 AHDC1Q5TGY3 1603 aaPredicted RBP12.96□□□□□ -0.33
CLN8-203ENST00000518780 SPATA31A3Q5VYP0 1347 aa12.96□□□□□ -0.33
CLN8-203ENST00000518780 NSD3Q9BZ95 1437 aa12.96□□□□□ -0.34
CLN8-203ENST00000518780 PAK3O75914 559 aaPredicted RBP12.95□□□□□ -0.34
CLN8-203ENST00000518780 NLRP13Q86W25 1043 aa12.95□□□□□ -0.34
CLN8-203ENST00000518780 ABTB2Q8N961 1025 aa12.95□□□□□ -0.34
CLN8-203ENST00000518780 PXDNQ92626 1479 aa12.95□□□□□ -0.34
CLN8-203ENST00000518780 ROBO1Q9Y6N7 1651 aa12.95□□□□□ -0.34
CLN8-203ENST00000518780 USP31Q70CQ4 1352 aa12.94□□□□□ -0.34
CLN8-203ENST00000518780 MYOM1P52179 1685 aa12.94□□□□□ -0.34
CLN8-203ENST00000518780 FYB1O15117 783 aa12.94□□□□□ -0.34
CLN8-203ENST00000518780 AMER1Q5JTC6 1135 aaPredicted RBP12.94□□□□□ -0.34
CLN8-203ENST00000518780 DDX17Q92841 729 aaKnown RBP12.94□□□□□ -0.34
CLN8-203ENST00000518780 TNS3Q68CZ2 1445 aa12.94□□□□□ -0.34
CLN8-203ENST00000518780 XPCQ01831 940 aaPredicted RBP12.93□□□□□ -0.34
CLN8-203ENST00000518780 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.93□□□□□ -0.34
CLN8-203ENST00000518780 RGPD8O14715 1765 aaPredicted RBP12.92□□□□□ -0.34
CLN8-203ENST00000518780 NLRP6P59044 892 aa12.92□□□□□ -0.34
CLN8-203ENST00000518780 COG3Q96JB2 828 aa12.92□□□□□ -0.34
CLN8-203ENST00000518780 NHSL1Q5SYE7 1610 aa12.91□□□□□ -0.34
CLN8-203ENST00000518780 KCNH5Q8NCM2 988 aa12.91□□□□□ -0.34
CLN8-203ENST00000518780 AKAP12Q02952 1782 aa12.9□□□□□ -0.34
CLN8-203ENST00000518780 MSH5O43196 834 aa12.9□□□□□ -0.34
CLN8-203ENST00000518780 LMOD2Q6P5Q4 547 aa12.9□□□□□ -0.34
CLN8-203ENST00000518780 NME9Q86XW9 330 aa12.9□□□□□ -0.34
CLN8-203ENST00000518780 JCADQ9P266 1359 aa12.9□□□□□ -0.34
CLN8-203ENST00000518780 MON2Q7Z3U7 1717 aa12.9□□□□□ -0.34
CLN8-203ENST00000518780 HSPA1LP34931 641 aa12.89□□□□□ -0.35
CLN8-203ENST00000518780 RALBP1Q15311 655 aa12.89□□□□□ -0.35
CLN8-203ENST00000518780 MORC1Q86VD1 984 aa12.89□□□□□ -0.35
CLN8-203ENST00000518780 USP19O94966 1318 aa12.88□□□□□ -0.35
CLN8-203ENST00000518780 GGNBP2Q9H3C7 697 aa12.88□□□□□ -0.35
CLN8-203ENST00000518780 OVOS2A0A0J9YW53 1432 aa12.88□□□□□ -0.35
CLN8-203ENST00000518780 OVOS2Q6IE36 1432 aa12.88□□□□□ -0.35
CLN8-203ENST00000518780 NRKQ7Z2Y5 1582 aa12.87□□□□□ -0.35
CLN8-203ENST00000518780 PNPLA6Q8IY17 1366 aa12.87□□□□□ -0.35
CLN8-203ENST00000518780 SPATA31A6Q5VVP1 1343 aa12.87□□□□□ -0.35
CLN8-203ENST00000518780 AATKQ6ZMQ8 1374 aa12.86□□□□□ -0.35
CLN8-203ENST00000518780 TRPM3Q9HCF6 1732 aaPredicted RBP12.86□□□□□ -0.35
CLN8-203ENST00000518780 ANP32CO43423 234 aa12.86□□□□□ -0.35
CLN8-203ENST00000518780 GCP02774 474 aa12.86□□□□□ -0.35
CLN8-203ENST00000518780 COL16A1Q07092 1604 aaPredicted RBP12.86□□□□□ -0.35
CLN8-203ENST00000518780 PHLPP1O60346 1717 aa12.85□□□□□ -0.35
CLN8-203ENST00000518780 CC2D1BQ5T0F9 858 aaKnown RBP12.85□□□□□ -0.35
CLN8-203ENST00000518780 DIEXFQ68CQ4 756 aaKnown RBP12.85□□□□□ -0.35
CLN8-203ENST00000518780 PARD3Q8TEW0 1356 aa12.84□□□□□ -0.35
CLN8-203ENST00000518780 NUTM2GQ5VZR2 741 aa12.84□□□□□ -0.35
CLN8-203ENST00000518780 PRKRIP1Q9H875 184 aaPredicted RBP12.84□□□□□ -0.35
CLN8-203ENST00000518780 MED1Q15648 1581 aaPredicted RBP12.84□□□□□ -0.35
CLN8-203ENST00000518780 ALS2Q96Q42 1657 aa12.83□□□□□ -0.35
CLN8-203ENST00000518780 KIF24Q5T7B8 1368 aa12.83□□□□□ -0.36
CLN8-203ENST00000518780 HAP1P54257 671 aaPredicted RBP12.83□□□□□ -0.36
CLN8-203ENST00000518780 ZRANB1Q9UGI0 708 aa12.83□□□□□ -0.36
CLN8-203ENST00000518780 SLIT3O75094 1523 aa12.83□□□□□ -0.36
CLN8-203ENST00000518780 CPDO75976 1380 aa12.82□□□□□ -0.36
CLN8-203ENST00000518780 PIK3C2AO00443 1686 aa12.82□□□□□ -0.36
CLN8-203ENST00000518780 USP54Q70EL1 1684 aa12.82□□□□□ -0.36
CLN8-203ENST00000518780 ARHGEF25Q86VW2 580 aa12.81□□□□□ -0.36
CLN8-203ENST00000518780 COL22A1Q8NFW1 1626 aaPredicted RBP12.8□□□□□ -0.36
CLN8-203ENST00000518780 CABLES1Q8TDN4 633 aa12.8□□□□□ -0.36
CLN8-203ENST00000518780 MYBBP1AQ9BQG0 1328 aaKnown RBP12.8□□□□□ -0.36
CLN8-203ENST00000518780 PPP2R1AP30153 589 aa12.79□□□□□ -0.36
CLN8-203ENST00000518780 POLKQ9UBT6 870 aa12.79□□□□□ -0.36
CLN8-203ENST00000518780 RTL1A6NKG5 1358 aa12.79□□□□□ -0.36
CLN8-203ENST00000518780 SHPRHQ149N8 1683 aa12.78□□□□□ -0.36
CLN8-203ENST00000518780 TNNT2P45379 298 aaPredicted RBP12.78□□□□□ -0.36
CLN8-203ENST00000518780 PRDM11Q9NQV5 511 aa12.78□□□□□ -0.36
CLN8-203ENST00000518780 MAP3K19Q56UN5 1328 aa12.78□□□□□ -0.36
CLN8-203ENST00000518780 KIF20BQ96Q89 1820 aa12.77□□□□□ -0.37
CLN8-203ENST00000518780 AMPHP49418 695 aa12.77□□□□□ -0.37
CLN8-203ENST00000518780 ZC3H6P61129 1189 aaKnown RBP12.77□□□□□ -0.37
CLN8-203ENST00000518780 IP6K1Q92551 441 aa12.77□□□□□ -0.37
CLN8-203ENST00000518780 CFAP53Q96M91 514 aa12.77□□□□□ -0.37
CLN8-203ENST00000518780 INSRP06213 1382 aa12.77□□□□□ -0.37
CLN8-203ENST00000518780 NFAT5O94916 1531 aa12.77□□□□□ -0.37
CLN8-203ENST00000518780 NUTM2BA6NNL0 878 aaPredicted RBP12.76□□□□□ -0.37
CLN8-203ENST00000518780 NUTM2EB1AL46 878 aaPredicted RBP12.76□□□□□ -0.37
CLN8-203ENST00000518780 SOX12O15370 315 aa12.76□□□□□ -0.37
CLN8-203ENST00000518780 MTHFSP49914 203 aa12.76□□□□□ -0.37
CLN8-203ENST00000518780 CNGB1Q14028 1251 aaPredicted RBP12.76□□□□□ -0.37
CLN8-203ENST00000518780 NUTM2AQ8IVF1 878 aaPredicted RBP12.76□□□□□ -0.37
CLN8-203ENST00000518780 FLT4P35916 1363 aa12.76□□□□□ -0.37
CLN8-203ENST00000518780 KIAA0232Q92628 1395 aa12.76□□□□□ -0.37
CLN8-203ENST00000518780 SMG6Q86US8 1419 aaKnown RBP12.76□□□□□ -0.37
CLN8-203ENST00000518780 ABCC6O95255 1503 aa12.76□□□□□ -0.37
CLN8-203ENST00000518780 FAM83GA6ND36 823 aa12.75□□□□□ -0.37
CLN8-203ENST00000518780 BLMP54132 1417 aaPredicted RBP12.75□□□□□ -0.37
CLN8-203ENST00000518780 RRS1Q15050 365 aaKnown RBP12.75□□□□□ -0.37
CLN8-203ENST00000518780 ANKRD26Q9UPS8 1709 aa12.75□□□□□ -0.37
CLN8-203ENST00000518780 CCER2I3L3R5 266 aa12.74□□□□□ -0.37
CLN8-203ENST00000518780 PLEKHG5O94827 1062 aa12.74□□□□□ -0.37
CLN8-203ENST00000518780 HOXC9P31274 260 aa12.74□□□□□ -0.37
CLN8-203ENST00000518780 EMILIN1Q9Y6C2 1016 aa12.74□□□□□ -0.37
CLN8-203ENST00000518780 PPM1GO15355 546 aaPredicted RBP12.73□□□□□ -0.37
CLN8-203ENST00000518780 ADAMTS2O95450 1211 aa12.73□□□□□ -0.37
CLN8-203ENST00000518780 FBLN1P23142 703 aa12.73□□□□□ -0.37
CLN8-203ENST00000518780 MEX3CQ5U5Q3 659 aaKnown RBP12.73□□□□□ -0.37
CLN8-203ENST00000518780 FNBP4Q8N3X1 1017 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms