RNA–Protein interactions for RNA: ENST00000518587.1

NPM1-205, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-205ENST00000518587 SPAG9O60271 1321 aaKnown RBP9.97□□□□□ -0.81
NPM1-205ENST00000518587 CCNB3Q8WWL7 1395 aa9.97□□□□□ -0.81
NPM1-205ENST00000518587 FAM135AQ9P2D6 1515 aa9.97□□□□□ -0.81
NPM1-205ENST00000518587 LAPTM4BQ86VI4 370 aa9.96□□□□□ -0.82
NPM1-205ENST00000518587 RBM46Q8TBY0 533 aaKnown RBP9.96□□□□□ -0.82
NPM1-205ENST00000518587 CCDC102AQ96A19 550 aa9.96□□□□□ -0.82
NPM1-205ENST00000518587 STAC3Q96MF2 364 aa9.96□□□□□ -0.82
NPM1-205ENST00000518587 SLC24A3Q9HC58 644 aa9.96□□□□□ -0.82
NPM1-205ENST00000518587 CFDP1Q9UEE9 299 aaPredicted RBP9.96□□□□□ -0.82
NPM1-205ENST00000518587 PTPRTO14522 1441 aa9.96□□□□□ -0.82
NPM1-205ENST00000518587 EHBP1L1Q8N3D4 1523 aa9.96□□□□□ -0.82
NPM1-205ENST00000518587 GPATCH8Q9UKJ3 1502 aaKnown RBP9.96□□□□□ -0.82
NPM1-205ENST00000518587 FAM98CQ17RN3 349 aaKnown RBP9.95□□□□□ -0.82
NPM1-205ENST00000518587 METTL3Q86U44 580 aaKnown RBP9.95□□□□□ -0.82
NPM1-205ENST00000518587 PXYLP1Q8TE99 480 aa9.95□□□□□ -0.82
NPM1-205ENST00000518587 PHOX2BQ99453 314 aa9.95□□□□□ -0.82
NPM1-205ENST00000518587 SAMD9LQ8IVG5 1584 aa9.95□□□□□ -0.82
NPM1-205ENST00000518587 KIDINS220Q9ULH0 1771 aa9.95□□□□□ -0.82
NPM1-205ENST00000518587 ATP7AQ04656 1500 aa9.94□□□□□ -0.82
NPM1-205ENST00000518587 IQSEC2Q5JU85 1478 aa9.94□□□□□ -0.82
NPM1-205ENST00000518587 RTEL1-TNFRSF6BF6WH68 1400 aa9.94□□□□□ -0.82
NPM1-205ENST00000518587 SYCP2Q9BX26 1530 aa9.93□□□□□ -0.82
NPM1-205ENST00000518587 CEP162Q5TB80 1403 aa9.93□□□□□ -0.82
NPM1-205ENST00000518587 HSPA2P54652 639 aa9.93□□□□□ -0.82
NPM1-205ENST00000518587 C3P01024 1663 aa9.93□□□□□ -0.82
NPM1-205ENST00000518587 ADGBQ8N7X0 1667 aa9.93□□□□□ -0.82
NPM1-205ENST00000518587 RCCD1A6NED2 376 aa9.92□□□□□ -0.82
NPM1-205ENST00000518587 ZFRQ96KR1 1074 aaKnown RBP9.92□□□□□ -0.82
NPM1-205ENST00000518587 AK7Q96M32 723 aa9.92□□□□□ -0.82
NPM1-205ENST00000518587 PLXNC1O60486 1568 aa9.92□□□□□ -0.82
NPM1-205ENST00000518587 INO80Q9ULG1 1556 aaPredicted RBP9.92□□□□□ -0.82
NPM1-205ENST00000518587 A2MP01023 1474 aa9.91□□□□□ -0.82
NPM1-205ENST00000518587 ZNF777Q9ULD5 760 aaPredicted RBP9.91□□□□□ -0.82
NPM1-205ENST00000518587 GOLGA8CPA6NN73 597 aa9.9□□□□□ -0.82
NPM1-205ENST00000518587 PLA2R1Q13018 1463 aa9.9□□□□□ -0.83
NPM1-205ENST00000518587 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.89□□□□□ -0.83
NPM1-205ENST00000518587 TRIM66O15016 1216 aa9.89□□□□□ -0.83
NPM1-205ENST00000518587 DNAJB2P25686 324 aa9.89□□□□□ -0.83
NPM1-205ENST00000518587 NLRP7Q8WX94 980 aa9.89□□□□□ -0.83
NPM1-205ENST00000518587 NCOA1Q15788 1441 aa9.89□□□□□ -0.83
NPM1-205ENST00000518587 ZMYM3Q14202 1370 aa9.88□□□□□ -0.83
NPM1-205ENST00000518587 SUPT6HQ7KZ85 1726 aaKnown RBP9.88□□□□□ -0.83
NPM1-205ENST00000518587 CEBPAP49715 358 aaPredicted RBP9.88□□□□□ -0.83
NPM1-205ENST00000518587 TMEM134Q9H6X4 195 aa9.88□□□□□ -0.83
NPM1-205ENST00000518587 TIMELESSQ9UNS1 1208 aa9.88□□□□□ -0.83
NPM1-205ENST00000518587 TIAM1Q13009 1591 aa9.88□□□□□ -0.83
NPM1-205ENST00000518587 ZNF142P52746 1687 aaPredicted RBP9.87□□□□□ -0.83
NPM1-205ENST00000518587 CCDC141Q6ZP82 1450 aa9.87□□□□□ -0.83
NPM1-205ENST00000518587 SAMD7Q7Z3H4 446 aa9.87□□□□□ -0.83
NPM1-205ENST00000518587 WNT2BQ93097 391 aa9.87□□□□□ -0.83
NPM1-205ENST00000518587 STRCQ7RTU9 1775 aa9.87□□□□□ -0.83
NPM1-205ENST00000518587 HNRNPMP52272 730 aaKnown RBP eCLIP9.86□□□□□ -0.835e-7■■■■■ 31.8
NPM1-205ENST00000518587 SWT1Q5T5J6 900 aaKnown RBP9.86□□□□□ -0.83
NPM1-205ENST00000518587 ANKK1Q8NFD2 765 aa9.86□□□□□ -0.83
NPM1-205ENST00000518587 KCTD12Q96CX2 325 aaKnown RBP9.86□□□□□ -0.83
NPM1-205ENST00000518587 MAP3K1Q13233 1512 aa9.86□□□□□ -0.83
NPM1-205ENST00000518587 DHX29Q7Z478 1369 aaKnown RBP9.86□□□□□ -0.83
NPM1-205ENST00000518587 MBD5Q9P267 1494 aa9.85□□□□□ -0.83
NPM1-205ENST00000518587 TSPY4P0CV99 314 aa9.85□□□□□ -0.83
NPM1-205ENST00000518587 TSPY10P0CW01 314 aa9.85□□□□□ -0.83
NPM1-205ENST00000518587 MMRN1Q13201 1228 aa9.85□□□□□ -0.83
NPM1-205ENST00000518587 ARHGEF5Q12774 1597 aa9.84□□□□□ -0.83
NPM1-205ENST00000518587 SOWAHBA6NEL2 793 aa9.84□□□□□ -0.83
NPM1-205ENST00000518587 HDGFP51858 240 aaKnown RBP9.84□□□□□ -0.83
NPM1-205ENST00000518587 MDM2Q00987 491 aaPredicted RBP9.84□□□□□ -0.83
NPM1-205ENST00000518587 AMHR2Q16671 573 aa9.84□□□□□ -0.83
NPM1-205ENST00000518587 CAMSAP1Q5T5Y3 1602 aa9.84□□□□□ -0.83
NPM1-205ENST00000518587 CLTCQ00610 1675 aaKnown RBP9.83□□□□□ -0.84
NPM1-205ENST00000518587 PTPRKQ15262 1439 aa9.83□□□□□ -0.84
NPM1-205ENST00000518587 KDM5DQ9BY66 1539 aa9.83□□□□□ -0.84
NPM1-205ENST00000518587 MYO3AQ8NEV4 1616 aa9.83□□□□□ -0.84
NPM1-205ENST00000518587 BCAMP50895 628 aa9.83□□□□□ -0.84
NPM1-205ENST00000518587 RNF166Q96A37 237 aaPredicted RBP9.83□□□□□ -0.84
NPM1-205ENST00000518587 LRCH3Q96II8 777 aa9.83□□□□□ -0.84
NPM1-205ENST00000518587 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.83□□□□□ -0.84
NPM1-205ENST00000518587 NCOA2Q15596 1464 aa9.83□□□□□ -0.84
NPM1-205ENST00000518587 CEP170BQ9Y4F5 1589 aaPredicted RBP9.83□□□□□ -0.84
NPM1-205ENST00000518587 VPS8Q8N3P4 1428 aa9.82□□□□□ -0.84
NPM1-205ENST00000518587 GGT6Q6P531 493 aa9.82□□□□□ -0.84
NPM1-205ENST00000518587 THSD4Q6ZMP0 1018 aa9.82□□□□□ -0.84
NPM1-205ENST00000518587 TMUB1Q9BVT8 246 aa9.82□□□□□ -0.84
NPM1-205ENST00000518587 REPIN1Q9BWE0 567 aaKnown RBP9.82□□□□□ -0.84
NPM1-205ENST00000518587 A2ML1A8K2U0 1454 aa9.82□□□□□ -0.84
NPM1-205ENST00000518587 CAMSAP2Q08AD1 1489 aa9.82□□□□□ -0.84
NPM1-205ENST00000518587 MIA2Q96PC5 1412 aa9.82□□□□□ -0.84
NPM1-205ENST00000518587 PZPP20742 1482 aa9.81□□□□□ -0.84
NPM1-205ENST00000518587 TCOF1Q13428 1488 aaKnown RBP9.81□□□□□ -0.84
NPM1-205ENST00000518587 PDE4DQ08499 809 aa9.81□□□□□ -0.84
NPM1-205ENST00000518587 ZC3H13Q5T200 1668 aaKnown RBP9.8□□□□□ -0.84
NPM1-205ENST00000518587 NLRP1Q9C000 1473 aa9.8□□□□□ -0.84
NPM1-205ENST00000518587 CLCN1P35523 988 aa9.8□□□□□ -0.84
NPM1-205ENST00000518587 GPCPD1Q9NPB8 672 aa9.8□□□□□ -0.84
NPM1-205ENST00000518587 MAST1Q9Y2H9 1570 aa9.8□□□□□ -0.84
NPM1-205ENST00000518587 LTBP4Q8N2S1 1624 aa9.79□□□□□ -0.84
NPM1-205ENST00000518587 EIF2AK4Q9P2K8 1649 aaKnown RBP9.79□□□□□ -0.84
NPM1-205ENST00000518587 SLF2Q8IX21 1173 aa9.79□□□□□ -0.84
NPM1-205ENST00000518587 WASHC2CQ9Y4E1 1318 aa9.79□□□□□ -0.84
NPM1-205ENST00000518587 LRRC9Q6ZRR7 1453 aa9.79□□□□□ -0.84
NPM1-205ENST00000518587 TNRQ92752 1358 aa9.78□□□□□ -0.84
NPM1-205ENST00000518587 KIF3BO15066 747 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms