RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 MTMR2Q13614 643 aa8.31□□□□□ -1.08
PABPC1-206ENST00000518293 SKIV2LQ15477 1246 aaKnown RBP8.31□□□□□ -1.08
PABPC1-206ENST00000518293 SH3D19Q5HYK7 790 aa8.31□□□□□ -1.08
PABPC1-206ENST00000518293 PRR7Q8TB68 274 aa8.31□□□□□ -1.08
PABPC1-206ENST00000518293 WASF2Q9Y6W5 498 aa8.31□□□□□ -1.08
PABPC1-206ENST00000518293 SIAH2O43255 324 aa8.3□□□□□ -1.08
PABPC1-206ENST00000518293 PROCA1Q8NCQ7 364 aaPredicted RBP8.3□□□□□ -1.08
PABPC1-206ENST00000518293 UNC93B1Q9H1C4 597 aa8.3□□□□□ -1.08
PABPC1-206ENST00000518293 EVA1BQ9NVM1 165 aa8.3□□□□□ -1.08
PABPC1-206ENST00000518293 CLK2P49760 499 aaKnown RBP8.29□□□□□ -1.08
PABPC1-206ENST00000518293 SH3BP2P78314 561 aa8.29□□□□□ -1.08
PABPC1-206ENST00000518293 NFX1Q12986 1120 aaKnown RBP8.29□□□□□ -1.08
PABPC1-206ENST00000518293 KCNH2Q12809 1159 aa8.28□□□□□ -1.08
PABPC1-206ENST00000518293 TUSC1Q2TAM9 212 aa8.28□□□□□ -1.08
PABPC1-206ENST00000518293 LINC01559Q495D7 138 aa8.28□□□□□ -1.08
PABPC1-206ENST00000518293 DESI1Q6ICB0 168 aa8.28□□□□□ -1.08
PABPC1-206ENST00000518293 GOPCQ9HD26 462 aa8.28□□□□□ -1.08
PABPC1-206ENST00000518293 QPCTQ16769 361 aa8.27□□□□□ -1.09
PABPC1-206ENST00000518293 CSPP1Q1MSJ5 1256 aa8.27□□□□□ -1.09
PABPC1-206ENST00000518293 BAP1Q92560 729 aa8.27□□□□□ -1.09
PABPC1-206ENST00000518293 TERTO14746 1132 aaKnown RBP8.26□□□□□ -1.09
PABPC1-206ENST00000518293 CAPN5O15484 640 aaPredicted RBP8.26□□□□□ -1.09
PABPC1-206ENST00000518293 FBXO31Q5XUX0 539 aaPredicted RBP8.26□□□□□ -1.09
PABPC1-206ENST00000518293 CABLES1Q8TDN4 633 aa8.26□□□□□ -1.09
PABPC1-206ENST00000518293 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.26□□□□□ -1.09
PABPC1-206ENST00000518293 LILRB3O75022 631 aa8.25□□□□□ -1.09
PABPC1-206ENST00000518293 HRCP23327 699 aa8.25□□□□□ -1.09
PABPC1-206ENST00000518293 CTHP32929 405 aa8.25□□□□□ -1.09
PABPC1-206ENST00000518293 ZNF511Q8NB15 262 aa8.25□□□□□ -1.09
PABPC1-206ENST00000518293 VARSP26640 1264 aaKnown RBP8.24□□□□□ -1.09
PABPC1-206ENST00000518293 PRPF38BQ5VTL8 546 aaKnown RBP8.24□□□□□ -1.09
PABPC1-206ENST00000518293 TLL2Q9Y6L7 1015 aa8.24□□□□□ -1.09
PABPC1-206ENST00000518293 WIPF1O43516 503 aa8.23□□□□□ -1.09
PABPC1-206ENST00000518293 BMP1P13497 986 aa8.23□□□□□ -1.09
PABPC1-206ENST00000518293 INSM1Q01101 510 aaPredicted RBP8.23□□□□□ -1.09
PABPC1-206ENST00000518293 RTL5Q5HYW3 569 aaPredicted RBP8.23□□□□□ -1.09
PABPC1-206ENST00000518293 PCMTD1Q96MG8 357 aaPredicted RBP8.23□□□□□ -1.09
PABPC1-206ENST00000518293 ZBTB3Q9H5J0 574 aa8.23□□□□□ -1.09
PABPC1-206ENST00000518293 LYPD8Q6UX82 237 aa8.22□□□□□ -1.09
PABPC1-206ENST00000518293 ATP1B4Q9UN42 357 aaPredicted RBP8.22□□□□□ -1.09
PABPC1-206ENST00000518293 NUTM2BA6NNL0 878 aaPredicted RBP8.21□□□□□ -1.1
PABPC1-206ENST00000518293 NUTM2EB1AL46 878 aaPredicted RBP8.21□□□□□ -1.1
PABPC1-206ENST00000518293 TMEM132AQ24JP5 1023 aa8.21□□□□□ -1.1
PABPC1-206ENST00000518293 NUTM2DQ5VT03 806 aaPredicted RBP8.21□□□□□ -1.1
PABPC1-206ENST00000518293 TRIM46Q7Z4K8 759 aa8.21□□□□□ -1.1
PABPC1-206ENST00000518293 NUTM2AQ8IVF1 878 aaPredicted RBP8.21□□□□□ -1.1
PABPC1-206ENST00000518293 SLC16A10Q8TF71 515 aa8.21□□□□□ -1.1
PABPC1-206ENST00000518293 CFAP99D6REC4 459 aa8.2□□□□□ -1.1
PABPC1-206ENST00000518293 NNTQ13423 1086 aa8.2□□□□□ -1.1
PABPC1-206ENST00000518293 PPP2R2DQ66LE6 453 aa8.2□□□□□ -1.1
PABPC1-206ENST00000518293 MPNDQ8N594 471 aa8.2□□□□□ -1.1
PABPC1-206ENST00000518293 FAM174AQ8TBP5 190 aa8.2□□□□□ -1.1
PABPC1-206ENST00000518293 STK17AQ9UEE5 414 aa8.2□□□□□ -1.1
PABPC1-206ENST00000518293 NXF1Q9UBU9 619 aaKnown RBP8.19□□□□□ -1.1
PABPC1-206ENST00000518293 TSC1Q92574 1164 aa8.17□□□□□ -1.1
PABPC1-206ENST00000518293 MAP10Q9P2G4 905 aa8.17□□□□□ -1.1
PABPC1-206ENST00000518293 ADH1CP00326 375 aa8.16□□□□□ -1.1
PABPC1-206ENST00000518293 F12P00748 615 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-206ENST00000518293 RFC5P40937 340 aa8.16□□□□□ -1.1
PABPC1-206ENST00000518293 SCARF1Q14162 830 aa8.16□□□□□ -1.1
PABPC1-206ENST00000518293 ARID5BQ14865 1188 aa8.16□□□□□ -1.1
PABPC1-206ENST00000518293 AGERQ15109 404 aa8.16□□□□□ -1.1
PABPC1-206ENST00000518293 LCE2CQ5TA81 110 aa8.16□□□□□ -1.1
PABPC1-206ENST00000518293 ZFP42Q96MM3 310 aa8.16□□□□□ -1.1
PABPC1-206ENST00000518293 WDR4P57081 412 aaKnown RBP8.15□□□□□ -1.1
PABPC1-206ENST00000518293 NPAS3Q8IXF0 933 aa8.15□□□□□ -1.1
PABPC1-206ENST00000518293 FOXJ1Q92949 421 aa8.15□□□□□ -1.1
PABPC1-206ENST00000518293 PER1O15534 1290 aaPredicted RBP8.14□□□□□ -1.11
PABPC1-206ENST00000518293 TIMP2P16035 220 aa8.14□□□□□ -1.11
PABPC1-206ENST00000518293 CTDSPL2Q05D32 466 aa8.14□□□□□ -1.11
PABPC1-206ENST00000518293 MRPL14Q6P1L8 145 aaKnown RBP8.14□□□□□ -1.11
PABPC1-206ENST00000518293 BPHLQ86WA6 291 aaPredicted RBP8.13□□□□□ -1.11
PABPC1-206ENST00000518293 IRF7Q92985 503 aa8.13□□□□□ -1.11
PABPC1-206ENST00000518293 CDK15Q96Q40 435 aa8.13□□□□□ -1.11
PABPC1-206ENST00000518293 ARMC2Q8NEN0 867 aa8.12□□□□□ -1.11
PABPC1-206ENST00000518293 PURBQ96QR8 312 aaKnown RBP8.12□□□□□ -1.11
PABPC1-206ENST00000518293 AP1G2O75843 785 aa8.11□□□□□ -1.11
PABPC1-206ENST00000518293 VEGFBP49765 207 aa8.11□□□□□ -1.11
PABPC1-206ENST00000518293 NR5A1Q13285 461 aa8.11□□□□□ -1.11
PABPC1-206ENST00000518293 HELBQ8NG08 1087 aaPredicted RBP8.11□□□□□ -1.11
PABPC1-206ENST00000518293 H3BM21 787 aa8.1□□□□□ -1.11
PABPC1-206ENST00000518293 ZIC2O95409 532 aaPredicted RBP8.1□□□□□ -1.11
PABPC1-206ENST00000518293 TMEM259Q4ZIN3 620 aa8.1□□□□□ -1.11
PABPC1-206ENST00000518293 KLF16Q9BXK1 252 aaPredicted RBP8.1□□□□□ -1.11
PABPC1-206ENST00000518293 FAM181BA6NEQ2 426 aa8.09□□□□□ -1.11
PABPC1-206ENST00000518293 GMPRP36959 345 aa8.09□□□□□ -1.11
PABPC1-206ENST00000518293 C4orf48Q5BLP8 95 aa8.09□□□□□ -1.11
PABPC1-206ENST00000518293 NBPF14Q5TI25 921 aa8.09□□□□□ -1.11
PABPC1-206ENST00000518293 LRRN4Q8WUT4 740 aa8.09□□□□□ -1.11
PABPC1-206ENST00000518293 ITPKCQ96DU7 683 aa8.08□□□□□ -1.12
PABPC1-206ENST00000518293 ZFAND3Q9H8U3 227 aa8.08□□□□□ -1.12
PABPC1-206ENST00000518293 UPP2O95045 317 aa8.07□□□□□ -1.12
PABPC1-206ENST00000518293 NR3C2P08235 984 aa8.07□□□□□ -1.12
PABPC1-206ENST00000518293 USP17L8P0C7I0 530 aa8.07□□□□□ -1.12
PABPC1-206ENST00000518293 GRM5P41594 1212 aa8.06□□□□□ -1.12
PABPC1-206ENST00000518293 C6orf118Q5T5N4 469 aa8.06□□□□□ -1.12
PABPC1-206ENST00000518293 MAGEB6P1A0A0J9YX57 407 aa8.05□□□□□ -1.12
PABPC1-206ENST00000518293 SOBPA7XYQ1 873 aa8.05□□□□□ -1.12
PABPC1-206ENST00000518293 MAN1A2O60476 641 aa8.05□□□□□ -1.12
PABPC1-206ENST00000518293 SH3RF1Q7Z6J0 888 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms