RNA–Protein interactions for RNA: ENST00000518236.1

FAM3B-206, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 2

Gene FAM3B, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-206ENST00000518236 EP400Q96L91 3159 aa15.48■□□□□ 0.07
FAM3B-206ENST00000518236 FAM83GA6ND36 823 aa15.48■□□□□ 0.07
FAM3B-206ENST00000518236 GJD4Q96KN9 370 aaPredicted RBP15.48■□□□□ 0.07
FAM3B-206ENST00000518236 POLR3AO14802 1390 aaPredicted RBP15.48■□□□□ 0.07
FAM3B-206ENST00000518236 ACEP12821 1306 aa15.47■□□□□ 0.07
FAM3B-206ENST00000518236 CABP2Q9NPB3 220 aa15.47■□□□□ 0.07
FAM3B-206ENST00000518236 ABCA3Q99758 1704 aa15.46■□□□□ 0.07
FAM3B-206ENST00000518236 HAP1P54257 671 aaPredicted RBP15.46■□□□□ 0.07
FAM3B-206ENST00000518236 ALS2Q96Q42 1657 aa15.46■□□□□ 0.07
FAM3B-206ENST00000518236 ROCK2O75116 1388 aaKnown RBP15.46■□□□□ 0.07
FAM3B-206ENST00000518236 TRPM1Q7Z4N2 1603 aa15.46■□□□□ 0.06
FAM3B-206ENST00000518236 PAK3O75914 559 aaPredicted RBP15.45■□□□□ 0.06
FAM3B-206ENST00000518236 SRPK2P78362 688 aaKnown RBP15.45■□□□□ 0.06
FAM3B-206ENST00000518236 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.45■□□□□ 0.06
FAM3B-206ENST00000518236 TOPAZ1Q8N9V7 1692 aa15.44■□□□□ 0.06
FAM3B-206ENST00000518236 RALGAPBQ86X10 1494 aa15.42■□□□□ 0.06
FAM3B-206ENST00000518236 VPS72Q15906 364 aa15.42■□□□□ 0.06
FAM3B-206ENST00000518236 PPIP5K1Q6PFW1 1433 aa15.42■□□□□ 0.06
FAM3B-206ENST00000518236 GLI3P10071 1580 aa15.41■□□□□ 0.06
FAM3B-206ENST00000518236 PPP4R3CPQ6ZMV5 832 aa15.41■□□□□ 0.06
FAM3B-206ENST00000518236 CABP1Q9NZU7 370 aa15.41■□□□□ 0.06
FAM3B-206ENST00000518236 ITSN1Q15811 1721 aa15.4■□□□□ 0.06
FAM3B-206ENST00000518236 TONSLQ96HA7 1378 aa15.4■□□□□ 0.06
FAM3B-206ENST00000518236 NUTM2GQ5VZR2 741 aa15.4■□□□□ 0.06
FAM3B-206ENST00000518236 PLCH1Q4KWH8 1693 aa15.4■□□□□ 0.06
FAM3B-206ENST00000518236 QRICH2Q9H0J4 1663 aa15.4■□□□□ 0.06
FAM3B-206ENST00000518236 EVC2Q86UK5 1308 aa15.4■□□□□ 0.06
FAM3B-206ENST00000518236 ONECUT3O60422 494 aaPredicted RBP15.39■□□□□ 0.05
FAM3B-206ENST00000518236 BTG4Q9NY30 223 aa15.39■□□□□ 0.05
FAM3B-206ENST00000518236 BRWD3Q6RI45 1802 aa15.38■□□□□ 0.05
FAM3B-206ENST00000518236 CRYBG1Q9Y4K1 1723 aa15.38■□□□□ 0.05
FAM3B-206ENST00000518236 CARD11Q9BXL7 1154 aa15.38■□□□□ 0.05
FAM3B-206ENST00000518236 RNF216Q9NWF9 866 aaPredicted RBP15.38■□□□□ 0.05
FAM3B-206ENST00000518236 SSH2Q76I76 1423 aa15.37■□□□□ 0.05
FAM3B-206ENST00000518236 ABTB2Q8N961 1025 aa15.37■□□□□ 0.05
FAM3B-206ENST00000518236 USP19O94966 1318 aa15.37■□□□□ 0.05
FAM3B-206ENST00000518236 ATAD2Q6PL18 1390 aa15.36■□□□□ 0.05
FAM3B-206ENST00000518236 KIAA0232Q92628 1395 aa15.36■□□□□ 0.05
FAM3B-206ENST00000518236 SEPT12Q8IYM1 358 aa15.36■□□□□ 0.05
FAM3B-206ENST00000518236 PRDM11Q9NQV5 511 aa15.36■□□□□ 0.05
FAM3B-206ENST00000518236 NWD2Q9ULI1 1742 aa15.36■□□□□ 0.05
FAM3B-206ENST00000518236 SBNO2Q9Y2G9 1366 aa15.36■□□□□ 0.05
FAM3B-206ENST00000518236 SRCAPQ6ZRS2 3230 aa15.36■□□□□ 0.05
FAM3B-206ENST00000518236 USP6P35125 1406 aa15.35■□□□□ 0.05
FAM3B-206ENST00000518236 ZC3H6P61129 1189 aaKnown RBP15.35■□□□□ 0.05
FAM3B-206ENST00000518236 CHRNA2Q15822 529 aa15.35■□□□□ 0.05
FAM3B-206ENST00000518236 CCDC9Q9Y3X0 531 aaKnown RBP15.35■□□□□ 0.05
FAM3B-206ENST00000518236 BRD4O60885 1362 aaPredicted RBP15.35■□□□□ 0.05
FAM3B-206ENST00000518236 NRAPQ86VF7 1730 aa15.34■□□□□ 0.05
FAM3B-206ENST00000518236 COL14A1Q05707 1796 aaKnown RBP15.34■□□□□ 0.05
FAM3B-206ENST00000518236 NLRP13Q86W25 1043 aa15.33■□□□□ 0.04
FAM3B-206ENST00000518236 SPATA31A5Q5VU36 1347 aa15.33■□□□□ 0.04
FAM3B-206ENST00000518236 SPATA31A7Q8IWB4 1347 aa15.33■□□□□ 0.04
FAM3B-206ENST00000518236 GCP02774 474 aa15.32■□□□□ 0.04
FAM3B-206ENST00000518236 CPDO75976 1380 aa15.32■□□□□ 0.04
FAM3B-206ENST00000518236 PHRF1Q9P1Y6 1649 aaKnown RBP15.32■□□□□ 0.04
FAM3B-206ENST00000518236 FAM98CQ17RN3 349 aaKnown RBP15.31■□□□□ 0.04
FAM3B-206ENST00000518236 ZNF692Q9BU19 519 aaPredicted RBP15.31■□□□□ 0.04
FAM3B-206ENST00000518236 CPSF1Q10570 1443 aaKnown RBP15.31■□□□□ 0.04
FAM3B-206ENST00000518236 NLRP6P59044 892 aa15.3■□□□□ 0.04
FAM3B-206ENST00000518236 NRKQ7Z2Y5 1582 aa15.3■□□□□ 0.04
FAM3B-206ENST00000518236 TTC21BQ7Z4L5 1316 aa15.3■□□□□ 0.04
FAM3B-206ENST00000518236 TESK2Q96S53 571 aa15.3■□□□□ 0.04
FAM3B-206ENST00000518236 SPATA31A1Q5TZJ5 1347 aa15.29■□□□□ 0.04
FAM3B-206ENST00000518236 ST20-MTHFSA0A0A6YYL1 179 aa15.28■□□□□ 0.04
FAM3B-206ENST00000518236 KRT27Q7Z3Y8 459 aa15.28■□□□□ 0.04
FAM3B-206ENST00000518236 CCDC125Q86Z20 511 aa15.28■□□□□ 0.04
FAM3B-206ENST00000518236 CNKSR2Q8WXI2 1034 aa15.28■□□□□ 0.04
FAM3B-206ENST00000518236 STRN4Q9NRL3 753 aa15.28■□□□□ 0.04
FAM3B-206ENST00000518236 CAMTA1Q9Y6Y1 1673 aa15.28■□□□□ 0.04
FAM3B-206ENST00000518236 SLC12A5Q9H2X9 1139 aa15.27■□□□□ 0.04
FAM3B-206ENST00000518236 CD163L1Q9NR16 1453 aa15.27■□□□□ 0.03
FAM3B-206ENST00000518236 PUS7Q96PZ0 661 aaKnown RBP15.26■□□□□ 0.03
FAM3B-206ENST00000518236 PCGF6Q9BYE7 350 aa15.26■□□□□ 0.03
FAM3B-206ENST00000518236 SLIT3O75094 1523 aa15.26■□□□□ 0.03
FAM3B-206ENST00000518236 TTC21AQ8NDW8 1320 aa15.25■□□□□ 0.03
FAM3B-206ENST00000518236 LARP1Q6PKG0 1096 aaKnown RBP15.25■□□□□ 0.03
FAM3B-206ENST00000518236 PIK3C2AO00443 1686 aa15.25■□□□□ 0.03
FAM3B-206ENST00000518236 LMO7Q8WWI1 1683 aa15.25■□□□□ 0.03
FAM3B-206ENST00000518236 KTN1Q86UP2 1357 aaKnown RBP15.24■□□□□ 0.03
FAM3B-206ENST00000518236 A0A0G2JS52 829 aa15.24■□□□□ 0.03
FAM3B-206ENST00000518236 EVA1CP58658 441 aa15.24■□□□□ 0.03
FAM3B-206ENST00000518236 MYT1Q01538 1121 aa15.24■□□□□ 0.03
FAM3B-206ENST00000518236 ZRANB1Q9UGI0 708 aa15.24■□□□□ 0.03
FAM3B-206ENST00000518236 BLMP54132 1417 aaPredicted RBP15.24■□□□□ 0.03
FAM3B-206ENST00000518236 AATKQ6ZMQ8 1374 aa15.24■□□□□ 0.03
FAM3B-206ENST00000518236 ARHGEF25Q86VW2 580 aa15.23■□□□□ 0.03
FAM3B-206ENST00000518236 TMC1Q8TDI8 760 aa15.23■□□□□ 0.03
FAM3B-206ENST00000518236 AXIN2Q9Y2T1 843 aa15.23■□□□□ 0.03
FAM3B-206ENST00000518236 CLSPNQ9HAW4 1339 aa15.22■□□□□ 0.03
FAM3B-206ENST00000518236 FAM182BQ5T319 152 aa15.22■□□□□ 0.03
FAM3B-206ENST00000518236 BARGINQ6ZT62 677 aa15.22■□□□□ 0.03
FAM3B-206ENST00000518236 DEFB132Q7Z7B7 95 aa15.22■□□□□ 0.03
FAM3B-206ENST00000518236 USP35Q9P2H5 1018 aa15.22■□□□□ 0.03
FAM3B-206ENST00000518236 TIMELESSQ9UNS1 1208 aa15.22■□□□□ 0.03
FAM3B-206ENST00000518236 USP31Q70CQ4 1352 aa15.22■□□□□ 0.03
FAM3B-206ENST00000518236 THSD7AQ9UPZ6 1657 aa15.22■□□□□ 0.03
FAM3B-206ENST00000518236 AKAP12Q02952 1782 aa15.21■□□□□ 0.03
FAM3B-206ENST00000518236 COL5A2P05997 1499 aaPredicted RBP15.21■□□□□ 0.03
FAM3B-206ENST00000518236 NME9Q86XW9 330 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms