RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 AATKQ6ZMQ8 1374 aa15.57■□□□□ 0.08
SPIDR-203ENST00000517693 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.57■□□□□ 0.08
SPIDR-203ENST00000517693 TTC21AQ8NDW8 1320 aa15.57■□□□□ 0.08
SPIDR-203ENST00000517693 USP6P35125 1406 aa15.56■□□□□ 0.08
SPIDR-203ENST00000517693 RUNDC1Q96C34 613 aa15.56■□□□□ 0.08
SPIDR-203ENST00000517693 ACEP12821 1306 aa15.56■□□□□ 0.08
SPIDR-203ENST00000517693 ADGRL3Q9HAR2 1447 aa15.55■□□□□ 0.08
SPIDR-203ENST00000517693 NKTRP30414 1462 aaKnown RBP15.55■□□□□ 0.08
SPIDR-203ENST00000517693 PNPLA6Q8IY17 1366 aa15.55■□□□□ 0.08
SPIDR-203ENST00000517693 COL3A1P02461 1466 aaPredicted RBP15.54■□□□□ 0.08
SPIDR-203ENST00000517693 CDK12Q9NYV4 1490 aaPredicted RBP15.54■□□□□ 0.08
SPIDR-203ENST00000517693 NALCNQ8IZF0 1738 aa15.53■□□□□ 0.08
SPIDR-203ENST00000517693 GOLGA2Q08379 1002 aa15.53■□□□□ 0.08
SPIDR-203ENST00000517693 SALL2Q9Y467 1007 aaPredicted RBP15.53■□□□□ 0.08
SPIDR-203ENST00000517693 TTC21BQ7Z4L5 1316 aa15.53■□□□□ 0.08
SPIDR-203ENST00000517693 DIAPH1O60610 1272 aaKnown RBP15.52■□□□□ 0.07
SPIDR-203ENST00000517693 NGDNQ8NEJ9 315 aaKnown RBP15.52■□□□□ 0.07
SPIDR-203ENST00000517693 ZNF521Q96K83 1311 aa15.52■□□□□ 0.07
SPIDR-203ENST00000517693 APAF1O14727 1248 aa15.51■□□□□ 0.07
SPIDR-203ENST00000517693 U2AF1L5P0DN76 240 aaPredicted RBP15.51■□□□□ 0.07
SPIDR-203ENST00000517693 U2AF1Q01081 240 aaKnown RBP eCLIP15.51■□□□□ 0.07
SPIDR-203ENST00000517693 NME9Q86XW9 330 aa15.51■□□□□ 0.07
SPIDR-203ENST00000517693 CCDC146Q8IYE0 955 aa15.51■□□□□ 0.07
SPIDR-203ENST00000517693 RNF123Q5XPI4 1314 aa15.51■□□□□ 0.07
SPIDR-203ENST00000517693 IQSEC2Q5JU85 1478 aa15.51■□□□□ 0.07
SPIDR-203ENST00000517693 OVOS2A0A0J9YW53 1432 aa15.5■□□□□ 0.07
SPIDR-203ENST00000517693 OVOS2Q6IE36 1432 aa15.5■□□□□ 0.07
SPIDR-203ENST00000517693 LRRC7Q96NW7 1537 aa15.5■□□□□ 0.07
SPIDR-203ENST00000517693 LMTK3Q96Q04 1460 aa15.5■□□□□ 0.07
SPIDR-203ENST00000517693 SSH2Q76I76 1423 aa15.5■□□□□ 0.07
SPIDR-203ENST00000517693 NCKAP5LQ9HCH0 1330 aa15.5■□□□□ 0.07
SPIDR-203ENST00000517693 NEFMP07197 916 aa15.5■□□□□ 0.07
SPIDR-203ENST00000517693 E9PSI1 815 aa15.49■□□□□ 0.07
SPIDR-203ENST00000517693 CCDC27Q2M243 656 aa15.49■□□□□ 0.07
SPIDR-203ENST00000517693 RCAN3Q9UKA8 241 aa15.49■□□□□ 0.07
SPIDR-203ENST00000517693 MAPK8IP3Q9UPT6 1336 aa15.48■□□□□ 0.07
SPIDR-203ENST00000517693 MAP2P11137 1827 aaKnown RBP15.48■□□□□ 0.07
SPIDR-203ENST00000517693 POLKQ9UBT6 870 aa15.48■□□□□ 0.07
SPIDR-203ENST00000517693 NCOA3Q9Y6Q9 1424 aa15.48■□□□□ 0.07
SPIDR-203ENST00000517693 NUTM2FA1L443 756 aa15.47■□□□□ 0.07
SPIDR-203ENST00000517693 U2SURPO15042 1029 aaKnown RBP15.47■□□□□ 0.07
SPIDR-203ENST00000517693 USP31Q70CQ4 1352 aa15.47■□□□□ 0.07
SPIDR-203ENST00000517693 C14orf37Q86TY3 774 aa15.47■□□□□ 0.07
SPIDR-203ENST00000517693 RGPD8O14715 1765 aaPredicted RBP15.46■□□□□ 0.07
SPIDR-203ENST00000517693 USP54Q70EL1 1684 aa15.46■□□□□ 0.07
SPIDR-203ENST00000517693 FCHSD2O94868 740 aa15.45■□□□□ 0.06
SPIDR-203ENST00000517693 TCP11L2Q8N4U5 519 aa15.45■□□□□ 0.06
SPIDR-203ENST00000517693 SENP3-EIF4A1A0A087X0R7 540 aa15.45■□□□□ 0.06
SPIDR-203ENST00000517693 WDR63Q8IWG1 891 aa15.45■□□□□ 0.06
SPIDR-203ENST00000517693 PMFBP1Q8TBY8 1022 aa15.45■□□□□ 0.06
SPIDR-203ENST00000517693 DCCP43146 1447 aa15.44■□□□□ 0.06
SPIDR-203ENST00000517693 SLFN5Q08AF3 891 aa15.44■□□□□ 0.06
SPIDR-203ENST00000517693 CDCA7LQ96GN5 454 aa15.44■□□□□ 0.06
SPIDR-203ENST00000517693 PHF8Q9UPP1 1060 aa15.44■□□□□ 0.06
SPIDR-203ENST00000517693 PPM1GO15355 546 aaPredicted RBP15.43■□□□□ 0.06
SPIDR-203ENST00000517693 DUSP27Q5VZP5 1158 aa15.43■□□□□ 0.06
SPIDR-203ENST00000517693 WWC1Q8IX03 1113 aa15.43■□□□□ 0.06
SPIDR-203ENST00000517693 KIF24Q5T7B8 1368 aa15.43■□□□□ 0.06
SPIDR-203ENST00000517693 RRP1P56182 461 aaKnown RBP15.43■□□□□ 0.06
SPIDR-203ENST00000517693 PROSER2Q86WR7 435 aaPredicted RBP15.43■□□□□ 0.06
SPIDR-203ENST00000517693 PPP4R2Q9NY27 417 aa15.43■□□□□ 0.06
SPIDR-203ENST00000517693 KIF1AQ12756 1690 aa15.42■□□□□ 0.06
SPIDR-203ENST00000517693 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.42■□□□□ 0.06
SPIDR-203ENST00000517693 PHF23Q9BUL5 403 aaPredicted RBP15.42■□□□□ 0.06
SPIDR-203ENST00000517693 TRMT2AQ8IZ69 625 aaKnown RBP15.41■□□□□ 0.06
SPIDR-203ENST00000517693 EMILIN1Q9Y6C2 1016 aa15.41■□□□□ 0.06
SPIDR-203ENST00000517693 PIK3C2AO00443 1686 aa15.41■□□□□ 0.06
SPIDR-203ENST00000517693 PLEKHF1Q96S99 279 aa15.4■□□□□ 0.06
SPIDR-203ENST00000517693 MYH16Q9H6N6 1097 aa15.4■□□□□ 0.06
SPIDR-203ENST00000517693 C19orf44Q9H6X5 657 aa15.4■□□□□ 0.06
SPIDR-203ENST00000517693 ZRANB1Q9UGI0 708 aa15.39■□□□□ 0.05
SPIDR-203ENST00000517693 SBNO1A3KN83 1393 aa15.39■□□□□ 0.05
SPIDR-203ENST00000517693 FLT4P35916 1363 aa15.39■□□□□ 0.05
SPIDR-203ENST00000517693 IL13P35225 146 aa15.38■□□□□ 0.05
SPIDR-203ENST00000517693 CALD1Q05682 793 aaKnown RBP15.38■□□□□ 0.05
SPIDR-203ENST00000517693 RRS1Q15050 365 aaKnown RBP15.38■□□□□ 0.05
SPIDR-203ENST00000517693 ESCO1Q5FWF5 840 aa15.38■□□□□ 0.05
SPIDR-203ENST00000517693 IL16Q14005 1332 aa15.37■□□□□ 0.05
SPIDR-203ENST00000517693 TMPOP42166 694 aaKnown RBP15.37■□□□□ 0.05
SPIDR-203ENST00000517693 IRX6P78412 446 aaPredicted RBP15.37■□□□□ 0.05
SPIDR-203ENST00000517693 LMOD3Q0VAK6 560 aa15.37■□□□□ 0.05
SPIDR-203ENST00000517693 RSPH6AQ9H0K4 717 aa15.37■□□□□ 0.05
SPIDR-203ENST00000517693 NLRP6P59044 892 aa15.36■□□□□ 0.05
SPIDR-203ENST00000517693 NEUROD2Q15784 382 aa15.36■□□□□ 0.05
SPIDR-203ENST00000517693 RTL1A6NKG5 1358 aa15.36■□□□□ 0.05
SPIDR-203ENST00000517693 CT47B1P0C2W7 299 aaPredicted RBP15.36■□□□□ 0.05
SPIDR-203ENST00000517693 ATF3P18847 181 aa15.36■□□□□ 0.05
SPIDR-203ENST00000517693 PSME1Q06323 249 aa15.36■□□□□ 0.05
SPIDR-203ENST00000517693 ABTB2Q8N961 1025 aa15.36■□□□□ 0.05
SPIDR-203ENST00000517693 PRKAR2BP31323 418 aa15.35■□□□□ 0.05
SPIDR-203ENST00000517693 RRP7AQ9Y3A4 280 aaKnown RBP15.35■□□□□ 0.05
SPIDR-203ENST00000517693 PAK3O75914 559 aaPredicted RBP15.34■□□□□ 0.05
SPIDR-203ENST00000517693 ARHGEF10O15013 1369 aa15.34■□□□□ 0.05
SPIDR-203ENST00000517693 TMEM94Q12767 1356 aa15.34■□□□□ 0.05
SPIDR-203ENST00000517693 C1orf167Q5SNV9 1468 aa15.34■□□□□ 0.05
SPIDR-203ENST00000517693 CADPS2Q86UW7 1296 aa15.33■□□□□ 0.05
SPIDR-203ENST00000517693 KCNH5Q8NCM2 988 aa15.33■□□□□ 0.05
SPIDR-203ENST00000517693 AMPHP49418 695 aa15.33■□□□□ 0.04
SPIDR-203ENST00000517693 RIPK4P57078 832 aa15.33■□□□□ 0.04
SPIDR-203ENST00000517693 MSH6P52701 1360 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms