RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 CHRNA2Q15822 529 aa12.72□□□□□ -0.37
EFCAB13-203ENST00000517484 PHACTR3Q96KR7 559 aa12.71□□□□□ -0.37
EFCAB13-203ENST00000517484 SKAP1Q86WV1 359 aa12.71□□□□□ -0.38
EFCAB13-203ENST00000517484 ASXL1Q8IXJ9 1541 aa12.71□□□□□ -0.38
EFCAB13-203ENST00000517484 ZNF335Q9H4Z2 1342 aaPredicted RBP12.7□□□□□ -0.38
EFCAB13-203ENST00000517484 PLEKHG1Q9ULL1 1385 aa12.7□□□□□ -0.38
EFCAB13-203ENST00000517484 C20orf194Q5TEA3 1177 aa12.7□□□□□ -0.38
EFCAB13-203ENST00000517484 PTPRUQ92729 1446 aa12.69□□□□□ -0.38
EFCAB13-203ENST00000517484 MYO5BQ9ULV0 1848 aa12.69□□□□□ -0.38
EFCAB13-203ENST00000517484 PTPRMP28827 1452 aa12.69□□□□□ -0.38
EFCAB13-203ENST00000517484 WWC1Q8IX03 1113 aa12.69□□□□□ -0.38
EFCAB13-203ENST00000517484 ADAMTS13Q76LX8 1427 aa12.69□□□□□ -0.38
EFCAB13-203ENST00000517484 TMEM131LA2VDJ0 1609 aa12.68□□□□□ -0.38
EFCAB13-203ENST00000517484 KRT28Q7Z3Y7 464 aa12.68□□□□□ -0.38
EFCAB13-203ENST00000517484 ZFYVE9O95405 1425 aa12.68□□□□□ -0.38
EFCAB13-203ENST00000517484 MCM10Q7L590 875 aa12.68□□□□□ -0.38
EFCAB13-203ENST00000517484 ADGRB1O14514 1584 aa12.68□□□□□ -0.38
EFCAB13-203ENST00000517484 LRRC59Q96AG4 307 aaKnown RBP12.67□□□□□ -0.38
EFCAB13-203ENST00000517484 NLRP2Q9NX02 1062 aa12.67□□□□□ -0.38
EFCAB13-203ENST00000517484 TMPOP42166 694 aaKnown RBP12.66□□□□□ -0.38
EFCAB13-203ENST00000517484 AEBP2Q6ZN18 517 aaPredicted RBP12.66□□□□□ -0.38
EFCAB13-203ENST00000517484 CRBNQ96SW2 442 aa12.66□□□□□ -0.38
EFCAB13-203ENST00000517484 STRN4Q9NRL3 753 aa12.66□□□□□ -0.38
EFCAB13-203ENST00000517484 TULP4Q9NRJ4 1543 aa12.65□□□□□ -0.38
EFCAB13-203ENST00000517484 NLRP1Q9C000 1473 aa12.65□□□□□ -0.38
EFCAB13-203ENST00000517484 EXOSC9Q06265 439 aaKnown RBP12.65□□□□□ -0.38
EFCAB13-203ENST00000517484 PANK1Q8TE04 598 aa12.65□□□□□ -0.38
EFCAB13-203ENST00000517484 MAP3K19Q56UN5 1328 aa12.65□□□□□ -0.38
EFCAB13-203ENST00000517484 NRXN1Q9ULB1 1477 aa12.65□□□□□ -0.38
EFCAB13-203ENST00000517484 RTF1Q92541 710 aaKnown RBP12.65□□□□□ -0.38
EFCAB13-203ENST00000517484 C19orf44Q9H6X5 657 aa12.65□□□□□ -0.38
EFCAB13-203ENST00000517484 COG6Q9Y2V7 657 aa12.65□□□□□ -0.38
EFCAB13-203ENST00000517484 SBNO2Q9Y2G9 1366 aa12.65□□□□□ -0.39
EFCAB13-203ENST00000517484 NUTM2BA6NNL0 878 aaPredicted RBP12.64□□□□□ -0.39
EFCAB13-203ENST00000517484 NUTM2EB1AL46 878 aaPredicted RBP12.64□□□□□ -0.39
EFCAB13-203ENST00000517484 EIF4A2Q14240 407 aaKnown RBP12.64□□□□□ -0.39
EFCAB13-203ENST00000517484 NUTM2AQ8IVF1 878 aaPredicted RBP12.64□□□□□ -0.39
EFCAB13-203ENST00000517484 RRP1P56182 461 aaKnown RBP12.64□□□□□ -0.39
EFCAB13-203ENST00000517484 TMEM94Q12767 1356 aa12.64□□□□□ -0.39
EFCAB13-203ENST00000517484 SPATA31D1Q6ZQQ2 1576 aa12.64□□□□□ -0.39
EFCAB13-203ENST00000517484 RIMS1Q86UR5 1692 aaKnown RBP12.64□□□□□ -0.39
EFCAB13-203ENST00000517484 SMC4Q9NTJ3 1288 aa12.64□□□□□ -0.39
EFCAB13-203ENST00000517484 TNNQ9UQP3 1299 aa12.64□□□□□ -0.39
EFCAB13-203ENST00000517484 MYT1Q01538 1121 aa12.63□□□□□ -0.39
EFCAB13-203ENST00000517484 ARXQ96QS3 562 aa12.63□□□□□ -0.39
EFCAB13-203ENST00000517484 KRT24Q2M2I5 525 aa12.63□□□□□ -0.39
EFCAB13-203ENST00000517484 NPHP4O75161 1426 aaPredicted RBP12.62□□□□□ -0.39
EFCAB13-203ENST00000517484 PPP4R2Q9NY27 417 aa12.62□□□□□ -0.39
EFCAB13-203ENST00000517484 RGS3P49796 1198 aa12.62□□□□□ -0.39
EFCAB13-203ENST00000517484 DUSP27Q5VZP5 1158 aa12.62□□□□□ -0.39
EFCAB13-203ENST00000517484 NPM2Q86SE8 214 aaKnown RBP12.62□□□□□ -0.39
EFCAB13-203ENST00000517484 FTSJ3Q8IY81 847 aaKnown RBP12.62□□□□□ -0.39
EFCAB13-203ENST00000517484 E9PSI1 815 aa12.61□□□□□ -0.39
EFCAB13-203ENST00000517484 CCDC9Q9Y3X0 531 aaKnown RBP12.61□□□□□ -0.39
EFCAB13-203ENST00000517484 SLFN5Q08AF3 891 aa12.61□□□□□ -0.39
EFCAB13-203ENST00000517484 PLEKHG3A1L390 1219 aa12.6□□□□□ -0.39
EFCAB13-203ENST00000517484 PDE3BQ13370 1112 aa12.6□□□□□ -0.39
EFCAB13-203ENST00000517484 ADAMTS2O95450 1211 aa12.6□□□□□ -0.39
EFCAB13-203ENST00000517484 PPLO60437 1756 aa12.6□□□□□ -0.39
EFCAB13-203ENST00000517484 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.6□□□□□ -0.39
EFCAB13-203ENST00000517484 GCP02774 474 aa12.59□□□□□ -0.39
EFCAB13-203ENST00000517484 EYA1Q99502 592 aa12.59□□□□□ -0.39
EFCAB13-203ENST00000517484 MYH16Q9H6N6 1097 aa12.59□□□□□ -0.39
EFCAB13-203ENST00000517484 EIF2S2P20042 333 aaKnown RBP12.58□□□□□ -0.39
EFCAB13-203ENST00000517484 KDM5AP29375 1690 aaKnown RBP12.58□□□□□ -0.39
EFCAB13-203ENST00000517484 PUS7Q96PZ0 661 aaKnown RBP12.58□□□□□ -0.4
EFCAB13-203ENST00000517484 PNNQ9H307 717 aaKnown RBP12.58□□□□□ -0.4
EFCAB13-203ENST00000517484 EVA1CP58658 441 aa12.58□□□□□ -0.4
EFCAB13-203ENST00000517484 QRICH2Q9H0J4 1663 aa12.58□□□□□ -0.4
EFCAB13-203ENST00000517484 APBB1O00213 710 aa12.57□□□□□ -0.4
EFCAB13-203ENST00000517484 FCHSD2O94868 740 aa12.57□□□□□ -0.4
EFCAB13-203ENST00000517484 CADPS2Q86UW7 1296 aa12.57□□□□□ -0.4
EFCAB13-203ENST00000517484 NGEFQ8N5V2 710 aa12.57□□□□□ -0.4
EFCAB13-203ENST00000517484 PRDM11Q9NQV5 511 aa12.57□□□□□ -0.4
EFCAB13-203ENST00000517484 IL13P35225 146 aa12.57□□□□□ -0.4
EFCAB13-203ENST00000517484 ZNF330Q9Y3S2 320 aaPredicted RBP12.57□□□□□ -0.4
EFCAB13-203ENST00000517484 ZC3H13Q5T200 1668 aaKnown RBP12.57□□□□□ -0.4
EFCAB13-203ENST00000517484 SLC4A10Q6U841 1118 aa12.57□□□□□ -0.4
EFCAB13-203ENST00000517484 ITPRIPQ8IWB1 547 aa12.57□□□□□ -0.4
EFCAB13-203ENST00000517484 MPRIPQ6WCQ1 1025 aa12.56□□□□□ -0.4
EFCAB13-203ENST00000517484 SLAIN2Q9P270 581 aa12.56□□□□□ -0.4
EFCAB13-203ENST00000517484 IQGAP1P46940 1657 aa12.56□□□□□ -0.4
EFCAB13-203ENST00000517484 FER1L4A9Z1Z3 1794 aa12.56□□□□□ -0.4
EFCAB13-203ENST00000517484 SIRT1Q96EB6 747 aa12.56□□□□□ -0.4
EFCAB13-203ENST00000517484 POLR3AO14802 1390 aaPredicted RBP12.55□□□□□ -0.4
EFCAB13-203ENST00000517484 TSPYL6Q8N831 410 aa12.55□□□□□ -0.4
EFCAB13-203ENST00000517484 DDX54Q8TDD1 881 aaKnown RBP12.55□□□□□ -0.4
EFCAB13-203ENST00000517484 RSPH6AQ9H0K4 717 aa12.55□□□□□ -0.4
EFCAB13-203ENST00000517484 NFE2L2Q16236 605 aa12.54□□□□□ -0.4
EFCAB13-203ENST00000517484 TRIM35Q9UPQ4 493 aa12.54□□□□□ -0.4
EFCAB13-203ENST00000517484 SETD1BQ9UPS6 1966 aaKnown RBP12.54□□□□□ -0.4
EFCAB13-203ENST00000517484 HOXC9P31274 260 aa12.54□□□□□ -0.4
EFCAB13-203ENST00000517484 MTHFSDQ2M296 383 aaKnown RBP12.54□□□□□ -0.4
EFCAB13-203ENST00000517484 EDC4Q6P2E9 1401 aaKnown RBP12.54□□□□□ -0.4
EFCAB13-203ENST00000517484 NBPF6Q5VWK0 638 aa12.54□□□□□ -0.4
EFCAB13-203ENST00000517484 NBPF4Q96M43 638 aa12.54□□□□□ -0.4
EFCAB13-203ENST00000517484 TSPYL4Q9UJ04 414 aa12.54□□□□□ -0.4
EFCAB13-203ENST00000517484 C3P01024 1663 aa12.53□□□□□ -0.4
EFCAB13-203ENST00000517484 SMG6Q86US8 1419 aaKnown RBP12.53□□□□□ -0.4
EFCAB13-203ENST00000517484 MSH6P52701 1360 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms