RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 TRPM1Q7Z4N2 1603 aa12.75□□□□□ -0.37
PABPC1-202ENST00000517403 ACIN1Q9UKV3 1341 aaKnown RBP12.73□□□□□ -0.37
PABPC1-202ENST00000517403 TRPC5Q9UL62 973 aaPredicted RBP12.73□□□□□ -0.37
PABPC1-202ENST00000517403 THSD7AQ9UPZ6 1657 aa12.73□□□□□ -0.37
PABPC1-202ENST00000517403 COL14A1Q05707 1796 aaKnown RBP12.72□□□□□ -0.37
PABPC1-202ENST00000517403 HRCP23327 699 aa12.72□□□□□ -0.37
PABPC1-202ENST00000517403 WASLO00401 505 aaPredicted RBP12.71□□□□□ -0.37
PABPC1-202ENST00000517403 GJD4Q96KN9 370 aaPredicted RBP12.71□□□□□ -0.37
PABPC1-202ENST00000517403 POGKQ9P215 609 aa12.71□□□□□ -0.37
PABPC1-202ENST00000517403 LMO7Q8WWI1 1683 aa12.7□□□□□ -0.38
PABPC1-202ENST00000517403 FAM83GA6ND36 823 aa12.7□□□□□ -0.38
PABPC1-202ENST00000517403 UNC5CLQ8IV45 518 aa12.69□□□□□ -0.38
PABPC1-202ENST00000517403 SIN3AQ96ST3 1273 aa12.69□□□□□ -0.38
PABPC1-202ENST00000517403 ATAD2Q6PL18 1390 aa12.69□□□□□ -0.38
PABPC1-202ENST00000517403 TNS1Q9HBL0 1735 aaKnown RBP12.68□□□□□ -0.38
PABPC1-202ENST00000517403 POLR3AO14802 1390 aaPredicted RBP12.68□□□□□ -0.38
PABPC1-202ENST00000517403 ARHGEF10O15013 1369 aa12.68□□□□□ -0.38
PABPC1-202ENST00000517403 PIK3C2AO00443 1686 aa12.67□□□□□ -0.38
PABPC1-202ENST00000517403 NUDT16Q96DE0 195 aaKnown RBP12.66□□□□□ -0.38
PABPC1-202ENST00000517403 CAMTA1Q9Y6Y1 1673 aa12.65□□□□□ -0.38
PABPC1-202ENST00000517403 MYCNP04198 464 aaPredicted RBP12.65□□□□□ -0.38
PABPC1-202ENST00000517403 VPS72Q15906 364 aa12.65□□□□□ -0.38
PABPC1-202ENST00000517403 LMOD2Q6P5Q4 547 aa12.65□□□□□ -0.38
PABPC1-202ENST00000517403 L3MBTL2Q969R5 705 aa12.65□□□□□ -0.38
PABPC1-202ENST00000517403 PSME1Q06323 249 aa12.64□□□□□ -0.39
PABPC1-202ENST00000517403 NUTM2GQ5VZR2 741 aa12.64□□□□□ -0.39
PABPC1-202ENST00000517403 CDK19Q9BWU1 502 aa12.64□□□□□ -0.39
PABPC1-202ENST00000517403 KIAA0232Q92628 1395 aa12.64□□□□□ -0.39
PABPC1-202ENST00000517403 AKAP12Q02952 1782 aa12.64□□□□□ -0.39
PABPC1-202ENST00000517403 HOXD11P31277 338 aaPredicted RBP12.63□□□□□ -0.39
PABPC1-202ENST00000517403 NBPF8Q3BBV2 869 aa12.63□□□□□ -0.39
PABPC1-202ENST00000517403 FAM182BQ5T319 152 aa12.63□□□□□ -0.39
PABPC1-202ENST00000517403 DEFB132Q7Z7B7 95 aa12.63□□□□□ -0.39
PABPC1-202ENST00000517403 SEPT12Q8IYM1 358 aa12.63□□□□□ -0.39
PABPC1-202ENST00000517403 COL18A1P39060 1754 aa12.63□□□□□ -0.39
PABPC1-202ENST00000517403 ACEP12821 1306 aa12.62□□□□□ -0.39
PABPC1-202ENST00000517403 EIF3AQ14152 1382 aaKnown RBP12.62□□□□□ -0.39
PABPC1-202ENST00000517403 CHRNA2Q15822 529 aa12.62□□□□□ -0.39
PABPC1-202ENST00000517403 SLIT3O75094 1523 aa12.62□□□□□ -0.39
PABPC1-202ENST00000517403 PPIP5K1Q6PFW1 1433 aa12.62□□□□□ -0.39
PABPC1-202ENST00000517403 SSH2Q76I76 1423 aa12.62□□□□□ -0.39
PABPC1-202ENST00000517403 GPRASP1Q5JY77 1395 aa12.61□□□□□ -0.39
PABPC1-202ENST00000517403 WNK3Q9BYP7 1800 aa12.61□□□□□ -0.39
PABPC1-202ENST00000517403 ONECUT3O60422 494 aaPredicted RBP12.61□□□□□ -0.39
PABPC1-202ENST00000517403 BTG4Q9NY30 223 aa12.61□□□□□ -0.39
PABPC1-202ENST00000517403 USP19O94966 1318 aa12.61□□□□□ -0.39
PABPC1-202ENST00000517403 ATXN8OSP0DMR3 200 aa12.6□□□□□ -0.39
PABPC1-202ENST00000517403 CABP2Q9NPB3 220 aa12.6□□□□□ -0.39
PABPC1-202ENST00000517403 BLMP54132 1417 aaPredicted RBP12.6□□□□□ -0.39
PABPC1-202ENST00000517403 MON2Q7Z3U7 1717 aa12.59□□□□□ -0.39
PABPC1-202ENST00000517403 RGPD5Q99666 1765 aa12.59□□□□□ -0.39
PABPC1-202ENST00000517403 SRCAPQ6ZRS2 3230 aa12.59□□□□□ -0.39
PABPC1-202ENST00000517403 FAM98CQ17RN3 349 aaKnown RBP12.59□□□□□ -0.39
PABPC1-202ENST00000517403 NGDNQ8NEJ9 315 aaKnown RBP12.59□□□□□ -0.39
PABPC1-202ENST00000517403 USP6P35125 1406 aa12.59□□□□□ -0.39
PABPC1-202ENST00000517403 SPATA31A5Q5VU36 1347 aa12.59□□□□□ -0.39
PABPC1-202ENST00000517403 SPATA31A7Q8IWB4 1347 aa12.59□□□□□ -0.39
PABPC1-202ENST00000517403 CENPJQ9HC77 1338 aaPredicted RBP12.59□□□□□ -0.39
PABPC1-202ENST00000517403 LRRC37A3O60309 1634 aa12.59□□□□□ -0.39
PABPC1-202ENST00000517403 PLEKHG3A1L390 1219 aa12.58□□□□□ -0.4
PABPC1-202ENST00000517403 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
PABPC1-202ENST00000517403 RGPD1P0DJD0 1748 aa12.58□□□□□ -0.4
PABPC1-202ENST00000517403 HAP1P54257 671 aaPredicted RBP12.58□□□□□ -0.4
PABPC1-202ENST00000517403 STAC3Q96MF2 364 aa12.58□□□□□ -0.4
PABPC1-202ENST00000517403 PEAK1Q9H792 1746 aa12.58□□□□□ -0.4
PABPC1-202ENST00000517403 CD163L1Q9NR16 1453 aa12.58□□□□□ -0.4
PABPC1-202ENST00000517403 ZC3H6P61129 1189 aaKnown RBP12.56□□□□□ -0.4
PABPC1-202ENST00000517403 COL5A2P05997 1499 aaPredicted RBP12.56□□□□□ -0.4
PABPC1-202ENST00000517403 PARP4Q9UKK3 1724 aaKnown RBP12.56□□□□□ -0.4
PABPC1-202ENST00000517403 NFAT5O94916 1531 aa12.56□□□□□ -0.4
PABPC1-202ENST00000517403 SPATA31A1Q5TZJ5 1347 aa12.56□□□□□ -0.4
PABPC1-202ENST00000517403 USP54Q70EL1 1684 aa12.55□□□□□ -0.4
PABPC1-202ENST00000517403 RREB1Q92766 1687 aa12.55□□□□□ -0.4
PABPC1-202ENST00000517403 PRDM11Q9NQV5 511 aa12.55□□□□□ -0.4
PABPC1-202ENST00000517403 CCDC9Q9Y3X0 531 aaKnown RBP12.55□□□□□ -0.4
PABPC1-202ENST00000517403 CCDC61Q9Y6R9 512 aa12.55□□□□□ -0.4
PABPC1-202ENST00000517403 NUP188Q5SRE5 1749 aa12.54□□□□□ -0.4
PABPC1-202ENST00000517403 NEUROD1Q13562 356 aa12.54□□□□□ -0.4
PABPC1-202ENST00000517403 KRT27Q7Z3Y8 459 aa12.54□□□□□ -0.4
PABPC1-202ENST00000517403 CPDO75976 1380 aa12.54□□□□□ -0.4
PABPC1-202ENST00000517403 CPSF1Q10570 1443 aaKnown RBP12.53□□□□□ -0.4
PABPC1-202ENST00000517403 LRP5O75197 1615 aa12.52□□□□□ -0.4
PABPC1-202ENST00000517403 SRPK2P78362 688 aaKnown RBP12.52□□□□□ -0.41
PABPC1-202ENST00000517403 LARP1Q6PKG0 1096 aaKnown RBP12.52□□□□□ -0.41
PABPC1-202ENST00000517403 STRN4Q9NRL3 753 aa12.52□□□□□ -0.41
PABPC1-202ENST00000517403 CABP1Q9NZU7 370 aa12.52□□□□□ -0.41
PABPC1-202ENST00000517403 ROCK2O75116 1388 aaKnown RBP12.52□□□□□ -0.41
PABPC1-202ENST00000517403 SBF2Q86WG5 1849 aa12.51□□□□□ -0.41
PABPC1-202ENST00000517403 ZRANB1Q9UGI0 708 aa12.51□□□□□ -0.41
PABPC1-202ENST00000517403 DISP2A7MBM2 1401 aa12.5□□□□□ -0.41
PABPC1-202ENST00000517403 ABTB2Q8N961 1025 aa12.49□□□□□ -0.41
PABPC1-202ENST00000517403 LTN1O94822 1766 aa12.48□□□□□ -0.41
PABPC1-202ENST00000517403 A0A0G2JS52 829 aa12.48□□□□□ -0.41
PABPC1-202ENST00000517403 GCP02774 474 aa12.48□□□□□ -0.41
PABPC1-202ENST00000517403 MYT1Q01538 1121 aa12.48□□□□□ -0.41
PABPC1-202ENST00000517403 PTF1AQ7RTS3 328 aa12.48□□□□□ -0.41
PABPC1-202ENST00000517403 USP35Q9P2H5 1018 aa12.48□□□□□ -0.41
PABPC1-202ENST00000517403 AXIN2Q9Y2T1 843 aa12.48□□□□□ -0.41
PABPC1-202ENST00000517403 SBNO2Q9Y2G9 1366 aa12.47□□□□□ -0.41
PABPC1-202ENST00000517403 PSDA5PKW4 1024 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms