RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 PRR20CP86479 221 aa11.87□□□□□ -0.51
SCARNA1-201ENST00000517138 PRR20DP86480 221 aa11.87□□□□□ -0.51
SCARNA1-201ENST00000517138 PRR20BP86481 221 aa11.87□□□□□ -0.51
SCARNA1-201ENST00000517138 PRR20AP86496 221 aa11.87□□□□□ -0.51
SCARNA1-201ENST00000517138 RC3H1Q5TC82 1133 aaKnown RBP11.86□□□□□ -0.51
SCARNA1-201ENST00000517138 MRGPRX2Q96LB1 330 aa11.86□□□□□ -0.51
SCARNA1-201ENST00000517138 WNT7AO00755 349 aa11.85□□□□□ -0.51
SCARNA1-201ENST00000517138 NRG2O14511 850 aaPredicted RBP11.85□□□□□ -0.51
SCARNA1-201ENST00000517138 NR6A1Q15406 480 aa11.85□□□□□ -0.51
SCARNA1-201ENST00000517138 LCE2BO14633 110 aa11.84□□□□□ -0.51
SCARNA1-201ENST00000517138 WNT7BP56706 349 aa11.84□□□□□ -0.51
SCARNA1-201ENST00000517138 ZNF511Q8NB15 262 aa11.84□□□□□ -0.51
SCARNA1-201ENST00000517138 FOXJ1Q92949 421 aa11.83□□□□□ -0.52
SCARNA1-201ENST00000517138 TOR4AQ9NXH8 423 aa11.83□□□□□ -0.52
SCARNA1-201ENST00000517138 C4orf48Q5BLP8 95 aa11.8□□□□□ -0.52
SCARNA1-201ENST00000517138 Q6ZNB5 142 aa11.8□□□□□ -0.52
SCARNA1-201ENST00000517138 LAPTM4AQ15012 233 aa11.79□□□□□ -0.52
SCARNA1-201ENST00000517138 TMEM259Q4ZIN3 620 aa11.79□□□□□ -0.52
SCARNA1-201ENST00000517138 EHBP1Q8NDI1 1231 aa11.79□□□□□ -0.52
SCARNA1-201ENST00000517138 TRIM34Q9BYJ4 488 aa11.79□□□□□ -0.52
SCARNA1-201ENST00000517138 J3QL48 77 aa11.78□□□□□ -0.52
SCARNA1-201ENST00000517138 SIAH2O43255 324 aa11.78□□□□□ -0.52
SCARNA1-201ENST00000517138 CYP4X1Q8N118 509 aa11.78□□□□□ -0.52
SCARNA1-201ENST00000517138 SNRKQ9NRH2 765 aa11.78□□□□□ -0.52
SCARNA1-201ENST00000517138 FAM187AA6NFU0 413 aa11.77□□□□□ -0.53
SCARNA1-201ENST00000517138 GJD4Q96KN9 370 aaPredicted RBP11.76□□□□□ -0.53
SCARNA1-201ENST00000517138 TTC24A2A3L6 582 aaPredicted RBP11.75□□□□□ -0.53
SCARNA1-201ENST00000517138 SNIP1Q8TAD8 396 aaKnown RBP11.75□□□□□ -0.53
SCARNA1-201ENST00000517138 FKBPLQ9UIM3 349 aa11.75□□□□□ -0.53
SCARNA1-201ENST00000517138 TLL2Q9Y6L7 1015 aa11.75□□□□□ -0.53
SCARNA1-201ENST00000517138 SMPD1P17405 629 aa11.74□□□□□ -0.53
SCARNA1-201ENST00000517138 MTMR14Q8NCE2 650 aa11.74□□□□□ -0.53
SCARNA1-201ENST00000517138 SH3BP5LQ7L8J4 393 aa11.73□□□□□ -0.53
SCARNA1-201ENST00000517138 SH3RF1Q7Z6J0 888 aa11.73□□□□□ -0.53
SCARNA1-201ENST00000517138 AGERQ15109 404 aa11.72□□□□□ -0.53
SCARNA1-201ENST00000517138 ARMC2Q8NEN0 867 aa11.72□□□□□ -0.53
SCARNA1-201ENST00000517138 OCSTAMPQ9BR26 566 aa11.72□□□□□ -0.53
SCARNA1-201ENST00000517138 ALDH1A1P00352 501 aa11.71□□□□□ -0.53
SCARNA1-201ENST00000517138 PKDCCQ504Y2 493 aa11.71□□□□□ -0.53
SCARNA1-201ENST00000517138 BANK1Q8NDB2 785 aa11.71□□□□□ -0.53
SCARNA1-201ENST00000517138 MAGEB6P1A0A0J9YX57 407 aa11.7□□□□□ -0.54
SCARNA1-201ENST00000517138 VARSP26640 1264 aaKnown RBP11.7□□□□□ -0.54
SCARNA1-201ENST00000517138 MYT1Q01538 1121 aa11.7□□□□□ -0.54
SCARNA1-201ENST00000517138 NBPF14Q5TI25 921 aa11.7□□□□□ -0.54
SCARNA1-201ENST00000517138 CARD14Q9BXL6 1004 aa11.7□□□□□ -0.54
SCARNA1-201ENST00000517138 GPR37L1O60883 481 aa11.69□□□□□ -0.54
SCARNA1-201ENST00000517138 DGAT1O75907 488 aa11.69□□□□□ -0.54
SCARNA1-201ENST00000517138 TRAF7Q6Q0C0 670 aa11.69□□□□□ -0.54
SCARNA1-201ENST00000517138 BPHLQ86WA6 291 aaPredicted RBP11.69□□□□□ -0.54
SCARNA1-201ENST00000517138 HPS1Q92902 700 aa11.69□□□□□ -0.54
SCARNA1-201ENST00000517138 ST8SIA5O15466 376 aa11.67□□□□□ -0.54
SCARNA1-201ENST00000517138 TMEM132AQ24JP5 1023 aa11.67□□□□□ -0.54
SCARNA1-201ENST00000517138 PDXDC2PQ6P474 469 aa11.67□□□□□ -0.54
SCARNA1-201ENST00000517138 C1QTNF2Q9BXJ5 285 aa11.67□□□□□ -0.54
SCARNA1-201ENST00000517138 GPKOWQ92917 476 aaPredicted RBP eCLIP11.66□□□□□ -0.54
SCARNA1-201ENST00000517138 ARID5BQ14865 1188 aa11.65□□□□□ -0.54
SCARNA1-201ENST00000517138 ERFEQ4G0M1 354 aa11.65□□□□□ -0.54
SCARNA1-201ENST00000517138 FAM174AQ8TBP5 190 aa11.65□□□□□ -0.54
SCARNA1-201ENST00000517138 ARHGAP9Q9BRR9 750 aa11.65□□□□□ -0.54
SCARNA1-201ENST00000517138 AVPP01185 164 aa11.63□□□□□ -0.55
SCARNA1-201ENST00000517138 AAASQ9NRG9 546 aa11.63□□□□□ -0.55
SCARNA1-201ENST00000517138 DACH1Q9UI36 760 aa11.63□□□□□ -0.55
SCARNA1-201ENST00000517138 ZC3H4Q9UPT8 1303 aaKnown RBP11.62□□□□□ -0.55
SCARNA1-201ENST00000517138 CDK15Q96Q40 435 aa11.62□□□□□ -0.55
SCARNA1-201ENST00000517138 GRM5P41594 1212 aa11.61□□□□□ -0.55
SCARNA1-201ENST00000517138 ADAM32Q8TC27 787 aa11.61□□□□□ -0.55
SCARNA1-201ENST00000517138 TBC1D2BQ9UPU7 963 aa11.61□□□□□ -0.55
SCARNA1-201ENST00000517138 WASF2Q9Y6W5 498 aa11.61□□□□□ -0.55
SCARNA1-201ENST00000517138 PTK2Q05397 1052 aa11.6□□□□□ -0.55
SCARNA1-201ENST00000517138 MCM6Q14566 821 aa11.6□□□□□ -0.55
SCARNA1-201ENST00000517138 MPNDQ8N594 471 aa11.6□□□□□ -0.55
SCARNA1-201ENST00000517138 ADH1CP00326 375 aa11.59□□□□□ -0.55
SCARNA1-201ENST00000517138 NR3C2P08235 984 aa11.59□□□□□ -0.55
SCARNA1-201ENST00000517138 NNTQ13423 1086 aa11.59□□□□□ -0.55
SCARNA1-201ENST00000517138 ZBTB33Q86T24 672 aa11.59□□□□□ -0.55
SCARNA1-201ENST00000517138 TRMT44Q8IYL2 757 aaKnown RBP11.59□□□□□ -0.55
SCARNA1-201ENST00000517138 SOCS7O14512 581 aa11.58□□□□□ -0.56
SCARNA1-201ENST00000517138 FBXO45P0C2W1 286 aa11.58□□□□□ -0.56
SCARNA1-201ENST00000517138 NDUFB9Q9Y6M9 179 aa11.57□□□□□ -0.56
SCARNA1-201ENST00000517138 VASH1Q7L8A9 365 aaPredicted RBP11.56□□□□□ -0.56
SCARNA1-201ENST00000517138 PNMA1Q8ND90 353 aa11.56□□□□□ -0.56
SCARNA1-201ENST00000517138 GPSM3Q9Y4H4 160 aa11.56□□□□□ -0.56
SCARNA1-201ENST00000517138 POTECB2RU33 542 aa11.55□□□□□ -0.56
SCARNA1-201ENST00000517138 AXIN1O15169 862 aa11.55□□□□□ -0.56
SCARNA1-201ENST00000517138 FSHRP23945 695 aa11.55□□□□□ -0.56
SCARNA1-201ENST00000517138 CRIPAKQ8N1N5 446 aa11.55□□□□□ -0.56
SCARNA1-201ENST00000517138 GDPD2Q9HCC8 539 aa11.55□□□□□ -0.56
SCARNA1-201ENST00000517138 ZBBXA8MT70 800 aa11.54□□□□□ -0.56
SCARNA1-201ENST00000517138 SMCPP49901 116 aaPredicted RBP11.54□□□□□ -0.56
SCARNA1-201ENST00000517138 MAP4K5Q9Y4K4 846 aa11.54□□□□□ -0.56
SCARNA1-201ENST00000517138 IRF5Q13568 498 aa11.53□□□□□ -0.56
SCARNA1-201ENST00000517138 SLC10A4Q96EP9 437 aa11.53□□□□□ -0.56
SCARNA1-201ENST00000517138 KLF16Q9BXK1 252 aaPredicted RBP11.53□□□□□ -0.56
SCARNA1-201ENST00000517138 CTC1Q2NKJ3 1217 aa11.52□□□□□ -0.57
SCARNA1-201ENST00000517138 POM121Q96HA1 1249 aa11.52□□□□□ -0.57
SCARNA1-201ENST00000517138 TIMP2P16035 220 aa11.51□□□□□ -0.57
SCARNA1-201ENST00000517138 KCTD15Q96SI1 283 aaPredicted RBP11.51□□□□□ -0.57
SCARNA1-201ENST00000517138 ZFAND3Q9H8U3 227 aa11.51□□□□□ -0.57
SCARNA1-201ENST00000517138 WDR4P57081 412 aaKnown RBP11.5□□□□□ -0.57
SCARNA1-201ENST00000517138 NR5A1Q13285 461 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms