RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 DDRGK1Q96HY6 314 aa6.96□□□□□ -1.3
RNU6-1088P-201ENST00000516850 POLR3EQ9NVU0 708 aa6.96□□□□□ -1.3
RNU6-1088P-201ENST00000516850 WASF2Q9Y6W5 498 aa6.96□□□□□ -1.3
RNU6-1088P-201ENST00000516850 LILRB3O75022 631 aa6.95□□□□□ -1.3
RNU6-1088P-201ENST00000516850 SMCPP49901 116 aaPredicted RBP6.95□□□□□ -1.3
RNU6-1088P-201ENST00000516850 KDM4CQ9H3R0 1056 aa6.95□□□□□ -1.3
RNU6-1088P-201ENST00000516850 PLEKHG3A1L390 1219 aa6.94□□□□□ -1.3
RNU6-1088P-201ENST00000516850 VARSP26640 1264 aaKnown RBP6.94□□□□□ -1.3
RNU6-1088P-201ENST00000516850 QPCTQ16769 361 aa6.94□□□□□ -1.3
RNU6-1088P-201ENST00000516850 ZNF511Q8NB15 262 aa6.94□□□□□ -1.3
RNU6-1088P-201ENST00000516850 AGERQ15109 404 aa6.93□□□□□ -1.3
RNU6-1088P-201ENST00000516850 ARMC2Q8NEN0 867 aa6.93□□□□□ -1.3
RNU6-1088P-201ENST00000516850 GPBP1L1Q9HC44 474 aaPredicted RBP6.93□□□□□ -1.3
RNU6-1088P-201ENST00000516850 SIAH2O43255 324 aa6.92□□□□□ -1.3
RNU6-1088P-201ENST00000516850 SKIV2LQ15477 1246 aaKnown RBP6.92□□□□□ -1.3
RNU6-1088P-201ENST00000516850 HPS1Q92902 700 aa6.92□□□□□ -1.3
RNU6-1088P-201ENST00000516850 F12P00748 615 aaPredicted RBP6.91□□□□□ -1.3
RNU6-1088P-201ENST00000516850 RTL5Q5HYW3 569 aaPredicted RBP6.91□□□□□ -1.3
RNU6-1088P-201ENST00000516850 FAM174AQ8TBP5 190 aa6.91□□□□□ -1.3
RNU6-1088P-201ENST00000516850 MAP10Q9P2G4 905 aa6.91□□□□□ -1.3
RNU6-1088P-201ENST00000516850 POTECB2RU33 542 aa6.9□□□□□ -1.3
RNU6-1088P-201ENST00000516850 C11orf95C9JLR9 678 aaPredicted RBP6.9□□□□□ -1.3
RNU6-1088P-201ENST00000516850 PER1O15534 1290 aaPredicted RBP6.9□□□□□ -1.3
RNU6-1088P-201ENST00000516850 SH3D19Q5HYK7 790 aa6.9□□□□□ -1.3
RNU6-1088P-201ENST00000516850 FAM117AQ9C073 453 aa6.9□□□□□ -1.3
RNU6-1088P-201ENST00000516850 DACH1Q9UI36 760 aa6.9□□□□□ -1.3
RNU6-1088P-201ENST00000516850 BPHLQ86WA6 291 aaPredicted RBP6.89□□□□□ -1.31
RNU6-1088P-201ENST00000516850 ZNF775Q96BV0 537 aaPredicted RBP6.89□□□□□ -1.31
RNU6-1088P-201ENST00000516850 SENP2Q9HC62 589 aa6.89□□□□□ -1.31
RNU6-1088P-201ENST00000516850 GMPR2Q9P2T1 348 aaKnown RBP6.89□□□□□ -1.31
RNU6-1088P-201ENST00000516850 ARID5BQ14865 1188 aa6.88□□□□□ -1.31
RNU6-1088P-201ENST00000516850 NBPF14Q5TI25 921 aa6.88□□□□□ -1.31
RNU6-1088P-201ENST00000516850 MPNDQ8N594 471 aa6.88□□□□□ -1.31
RNU6-1088P-201ENST00000516850 ATP13A2Q9NQ11 1180 aa6.88□□□□□ -1.31
RNU6-1088P-201ENST00000516850 CAPN5O15484 640 aaPredicted RBP6.87□□□□□ -1.31
RNU6-1088P-201ENST00000516850 NEUROD2Q15784 382 aa6.87□□□□□ -1.31
RNU6-1088P-201ENST00000516850 FOXJ1Q92949 421 aa6.87□□□□□ -1.31
RNU6-1088P-201ENST00000516850 TLL2Q9Y6L7 1015 aa6.87□□□□□ -1.31
RNU6-1088P-201ENST00000516850 CTDSPL2Q05D32 466 aa6.86□□□□□ -1.31
RNU6-1088P-201ENST00000516850 KIFC2Q96AC6 838 aa6.86□□□□□ -1.31
RNU6-1088P-201ENST00000516850 NNTQ13423 1086 aa6.85□□□□□ -1.31
RNU6-1088P-201ENST00000516850 PROCA1Q8NCQ7 364 aaPredicted RBP6.85□□□□□ -1.31
RNU6-1088P-201ENST00000516850 GPKOWQ92917 476 aaPredicted RBP eCLIP6.85□□□□□ -1.31
RNU6-1088P-201ENST00000516850 AP1G2O75843 785 aa6.84□□□□□ -1.31
RNU6-1088P-201ENST00000516850 PPP2R2DQ66LE6 453 aa6.84□□□□□ -1.31
RNU6-1088P-201ENST00000516850 PCMTD1Q96MG8 357 aaPredicted RBP6.84□□□□□ -1.31
RNU6-1088P-201ENST00000516850 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.84□□□□□ -1.31
RNU6-1088P-201ENST00000516850 MAGEB6P1A0A0J9YX57 407 aa6.83□□□□□ -1.32
RNU6-1088P-201ENST00000516850 ADH1CP00326 375 aa6.83□□□□□ -1.32
RNU6-1088P-201ENST00000516850 PNMA1Q8ND90 353 aa6.83□□□□□ -1.32
RNU6-1088P-201ENST00000516850 WDR4P57081 412 aaKnown RBP6.82□□□□□ -1.32
RNU6-1088P-201ENST00000516850 NR5A1Q13285 461 aa6.82□□□□□ -1.32
RNU6-1088P-201ENST00000516850 TRIM47Q96LD4 638 aa6.82□□□□□ -1.32
RNU6-1088P-201ENST00000516850 CDK15Q96Q40 435 aa6.82□□□□□ -1.32
RNU6-1088P-201ENST00000516850 SCARF1Q14162 830 aa6.81□□□□□ -1.32
RNU6-1088P-201ENST00000516850 VASH1Q7L8A9 365 aaPredicted RBP6.81□□□□□ -1.32
RNU6-1088P-201ENST00000516850 IL27Q8NEV9 243 aa6.81□□□□□ -1.32
RNU6-1088P-201ENST00000516850 LRRN4Q8WUT4 740 aa6.81□□□□□ -1.32
RNU6-1088P-201ENST00000516850 CARD14Q9BXL6 1004 aa6.81□□□□□ -1.32
RNU6-1088P-201ENST00000516850 GOPCQ9HD26 462 aa6.81□□□□□ -1.32
RNU6-1088P-201ENST00000516850 NR6A1Q15406 480 aa6.8□□□□□ -1.32
RNU6-1088P-201ENST00000516850 C4orf48Q5BLP8 95 aa6.8□□□□□ -1.32
RNU6-1088P-201ENST00000516850 PDXDC2PQ6P474 469 aa6.8□□□□□ -1.32
RNU6-1088P-201ENST00000516850 SH3RF1Q7Z6J0 888 aa6.8□□□□□ -1.32
RNU6-1088P-201ENST00000516850 ZBTB33Q86T24 672 aa6.8□□□□□ -1.32
RNU6-1088P-201ENST00000516850 ARHGAP9Q9BRR9 750 aa6.8□□□□□ -1.32
RNU6-1088P-201ENST00000516850 FKBPLQ9UIM3 349 aa6.8□□□□□ -1.32
RNU6-1088P-201ENST00000516850 ZC3H4Q9UPT8 1303 aaKnown RBP6.79□□□□□ -1.32
RNU6-1088P-201ENST00000516850 BMP1P13497 986 aa6.79□□□□□ -1.32
RNU6-1088P-201ENST00000516850 SNRPBP14678 240 aaKnown RBP6.79□□□□□ -1.32
RNU6-1088P-201ENST00000516850 TPRNQ4KMQ1 711 aa6.79□□□□□ -1.32
RNU6-1088P-201ENST00000516850 SH3BP5LQ7L8J4 393 aa6.79□□□□□ -1.32
RNU6-1088P-201ENST00000516850 UPP2O95045 317 aa6.78□□□□□ -1.32
RNU6-1088P-201ENST00000516850 ZIC2O95409 532 aaPredicted RBP6.78□□□□□ -1.32
RNU6-1088P-201ENST00000516850 TIMP2P16035 220 aa6.78□□□□□ -1.32
RNU6-1088P-201ENST00000516850 RFC5P40937 340 aa6.78□□□□□ -1.32
RNU6-1088P-201ENST00000516850 PTK2Q05397 1052 aa6.78□□□□□ -1.32
RNU6-1088P-201ENST00000516850 TREML4Q6UXN2 200 aa6.78□□□□□ -1.32
RNU6-1088P-201ENST00000516850 MAP4K5Q9Y4K4 846 aa6.78□□□□□ -1.32
RNU6-1088P-201ENST00000516850 WFS1O76024 890 aa6.77□□□□□ -1.33
RNU6-1088P-201ENST00000516850 USP17L8P0C7I0 530 aa6.77□□□□□ -1.33
RNU6-1088P-201ENST00000516850 GRM5P41594 1212 aa6.77□□□□□ -1.33
RNU6-1088P-201ENST00000516850 TMEM259Q4ZIN3 620 aa6.77□□□□□ -1.33
RNU6-1088P-201ENST00000516850 MRPL14Q6P1L8 145 aaKnown RBP6.77□□□□□ -1.33
RNU6-1088P-201ENST00000516850 TRIM46Q7Z4K8 759 aa6.77□□□□□ -1.33
RNU6-1088P-201ENST00000516850 TRMT44Q8IYL2 757 aaKnown RBP6.77□□□□□ -1.33
RNU6-1088P-201ENST00000516850 C1QTNF2Q9BXJ5 285 aa6.77□□□□□ -1.33
RNU6-1088P-201ENST00000516850 CDV3Q9UKY7 258 aaKnown RBP6.77□□□□□ -1.33
RNU6-1088P-201ENST00000516850 FSHRP23945 695 aa6.76□□□□□ -1.33
RNU6-1088P-201ENST00000516850 ERFEQ4G0M1 354 aa6.76□□□□□ -1.33
RNU6-1088P-201ENST00000516850 FBXO31Q5XUX0 539 aaPredicted RBP6.76□□□□□ -1.33
RNU6-1088P-201ENST00000516850 SLC10A4Q96EP9 437 aa6.76□□□□□ -1.33
RNU6-1088P-201ENST00000516850 ZFP42Q96MM3 310 aa6.76□□□□□ -1.33
RNU6-1088P-201ENST00000516850 EMILIN1Q9Y6C2 1016 aa6.76□□□□□ -1.33
RNU6-1088P-201ENST00000516850 BRPF1P55201 1214 aaPredicted RBP6.75□□□□□ -1.33
RNU6-1088P-201ENST00000516850 CCDC116Q8IYX3 515 aa6.75□□□□□ -1.33
RNU6-1088P-201ENST00000516850 SLC16A10Q8TF71 515 aa6.75□□□□□ -1.33
RNU6-1088P-201ENST00000516850 ITPKCQ96DU7 683 aa6.75□□□□□ -1.33
RNU6-1088P-201ENST00000516850 PURBQ96QR8 312 aaKnown RBP6.75□□□□□ -1.33
RNU6-1088P-201ENST00000516850 GPSM3Q9Y4H4 160 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms