RNA–Protein interactions for RNA: ENST00000516424.1

RN7SKP253-201, Transcript of RNA, 7SK small nuclear pseudogene 253, humanhuman

BASIC

Gene RN7SKP253, Length 309 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP253-201ENST00000516424 CABLES1Q8TDN4 633 aa12.25□□□□□ -0.45
RN7SKP253-201ENST00000516424 ZBTB3Q9H5J0 574 aa12.25□□□□□ -0.45
RN7SKP253-201ENST00000516424 BMP1P13497 986 aa12.24□□□□□ -0.45
RN7SKP253-201ENST00000516424 CSPP1Q1MSJ5 1256 aa12.23□□□□□ -0.45
RN7SKP253-201ENST00000516424 KIFC2Q96AC6 838 aa12.23□□□□□ -0.45
RN7SKP253-201ENST00000516424 CAPN5O15484 640 aaPredicted RBP12.22□□□□□ -0.45
RN7SKP253-201ENST00000516424 PDE4DQ08499 809 aa12.22□□□□□ -0.45
RN7SKP253-201ENST00000516424 MAP10Q9P2G4 905 aa12.22□□□□□ -0.45
RN7SKP253-201ENST00000516424 VARSP26640 1264 aaKnown RBP12.21□□□□□ -0.45
RN7SKP253-201ENST00000516424 PRPF38BQ5VTL8 546 aaKnown RBP12.21□□□□□ -0.45
RN7SKP253-201ENST00000516424 TRIM46Q7Z4K8 759 aa12.21□□□□□ -0.45
RN7SKP253-201ENST00000516424 F12P00748 615 aaPredicted RBP12.2□□□□□ -0.46
RN7SKP253-201ENST00000516424 LIMD1Q9UGP4 676 aa12.2□□□□□ -0.46
RN7SKP253-201ENST00000516424 LCE2CQ5TA81 110 aa12.19□□□□□ -0.46
RN7SKP253-201ENST00000516424 MYSM1Q5VVJ2 828 aa12.19□□□□□ -0.46
RN7SKP253-201ENST00000516424 SLC24A3Q9HC58 644 aa12.19□□□□□ -0.46
RN7SKP253-201ENST00000516424 TERTO14746 1132 aaKnown RBP12.18□□□□□ -0.46
RN7SKP253-201ENST00000516424 PER1O15534 1290 aaPredicted RBP12.18□□□□□ -0.46
RN7SKP253-201ENST00000516424 NNTQ13423 1086 aa12.17□□□□□ -0.46
RN7SKP253-201ENST00000516424 QPCTQ16769 361 aa12.17□□□□□ -0.46
RN7SKP253-201ENST00000516424 FOXJ1Q92949 421 aa12.17□□□□□ -0.46
RN7SKP253-201ENST00000516424 PLEKHG3A1L390 1219 aa12.16□□□□□ -0.46
RN7SKP253-201ENST00000516424 MPNDQ8N594 471 aa12.16□□□□□ -0.46
RN7SKP253-201ENST00000516424 TSC1Q92574 1164 aa12.16□□□□□ -0.46
RN7SKP253-201ENST00000516424 NUTM2BA6NNL0 878 aaPredicted RBP12.14□□□□□ -0.47
RN7SKP253-201ENST00000516424 NUTM2EB1AL46 878 aaPredicted RBP12.14□□□□□ -0.47
RN7SKP253-201ENST00000516424 NUTM2DQ5VT03 806 aaPredicted RBP12.14□□□□□ -0.47
RN7SKP253-201ENST00000516424 NUTM2AQ8IVF1 878 aaPredicted RBP12.14□□□□□ -0.47
RN7SKP253-201ENST00000516424 FAM174AQ8TBP5 190 aa12.14□□□□□ -0.47
RN7SKP253-201ENST00000516424 WIPF1O43516 503 aa12.12□□□□□ -0.47
RN7SKP253-201ENST00000516424 LILRB3O75022 631 aa12.12□□□□□ -0.47
RN7SKP253-201ENST00000516424 ADH1CP00326 375 aa12.11□□□□□ -0.47
RN7SKP253-201ENST00000516424 TUSC1Q2TAM9 212 aa12.11□□□□□ -0.47
RN7SKP253-201ENST00000516424 C4orf48Q5BLP8 95 aa12.11□□□□□ -0.47
RN7SKP253-201ENST00000516424 ZFP42Q96MM3 310 aa12.11□□□□□ -0.47
RN7SKP253-201ENST00000516424 TIMP2P16035 220 aa12.1□□□□□ -0.47
RN7SKP253-201ENST00000516424 ARID5BQ14865 1188 aa12.1□□□□□ -0.47
RN7SKP253-201ENST00000516424 WDR4P57081 412 aaKnown RBP12.09□□□□□ -0.47
RN7SKP253-201ENST00000516424 AGERQ15109 404 aa12.09□□□□□ -0.47
RN7SKP253-201ENST00000516424 RTL5Q5HYW3 569 aaPredicted RBP12.09□□□□□ -0.47
RN7SKP253-201ENST00000516424 CDK15Q96Q40 435 aa12.09□□□□□ -0.47
RN7SKP253-201ENST00000516424 KLF16Q9BXK1 252 aaPredicted RBP12.09□□□□□ -0.47
RN7SKP253-201ENST00000516424 CLK2P49760 499 aaKnown RBP12.08□□□□□ -0.48
RN7SKP253-201ENST00000516424 NXF1Q9UBU9 619 aaKnown RBP12.08□□□□□ -0.48
RN7SKP253-201ENST00000516424 MRPL14Q6P1L8 145 aaKnown RBP12.06□□□□□ -0.48
RN7SKP253-201ENST00000516424 BPHLQ86WA6 291 aaPredicted RBP12.06□□□□□ -0.48
RN7SKP253-201ENST00000516424 POLR3EQ9NVU0 708 aa12.06□□□□□ -0.48
RN7SKP253-201ENST00000516424 NR3C2P08235 984 aa12.05□□□□□ -0.48
RN7SKP253-201ENST00000516424 HELBQ8NG08 1087 aaPredicted RBP12.05□□□□□ -0.48
RN7SKP253-201ENST00000516424 VEGFBP49765 207 aa12.04□□□□□ -0.48
RN7SKP253-201ENST00000516424 INSM1Q01101 510 aaPredicted RBP12.04□□□□□ -0.48
RN7SKP253-201ENST00000516424 PURBQ96QR8 312 aaKnown RBP12.04□□□□□ -0.48
RN7SKP253-201ENST00000516424 GRM5P41594 1212 aa12.03□□□□□ -0.48
RN7SKP253-201ENST00000516424 SLC16A10Q8TF71 515 aa12.03□□□□□ -0.48
RN7SKP253-201ENST00000516424 ZFAND3Q9H8U3 227 aa12.03□□□□□ -0.48
RN7SKP253-201ENST00000516424 ZIC2O95409 532 aaPredicted RBP12.02□□□□□ -0.49
RN7SKP253-201ENST00000516424 SCARF1Q14162 830 aa12.02□□□□□ -0.49
RN7SKP253-201ENST00000516424 ARMC2Q8NEN0 867 aa12.02□□□□□ -0.49
RN7SKP253-201ENST00000516424 ITPKCQ96DU7 683 aa12.02□□□□□ -0.49
RN7SKP253-201ENST00000516424 RSPH6AQ9H0K4 717 aa12.02□□□□□ -0.49
RN7SKP253-201ENST00000516424 NR5A1Q13285 461 aa12.01□□□□□ -0.49
RN7SKP253-201ENST00000516424 SH3RF1Q7Z6J0 888 aa12.01□□□□□ -0.49
RN7SKP253-201ENST00000516424 STK17AQ9UEE5 414 aa12.01□□□□□ -0.49
RN7SKP253-201ENST00000516424 NBPF14Q5TI25 921 aa12□□□□□ -0.49
RN7SKP253-201ENST00000516424 C1QTNF2Q9BXJ5 285 aa12□□□□□ -0.49
RN7SKP253-201ENST00000516424 SOBPA7XYQ1 873 aa11.99□□□□□ -0.49
RN7SKP253-201ENST00000516424 NPAS3Q8IXF0 933 aa11.99□□□□□ -0.49
RN7SKP253-201ENST00000516424 H3BM21 787 aa11.98□□□□□ -0.49
RN7SKP253-201ENST00000516424 GMPRP36959 345 aa11.98□□□□□ -0.49
RN7SKP253-201ENST00000516424 CTDSPL2Q05D32 466 aa11.98□□□□□ -0.49
RN7SKP253-201ENST00000516424 SH3BP5LQ7L8J4 393 aa11.98□□□□□ -0.49
RN7SKP253-201ENST00000516424 MAGEB6P1A0A0J9YX57 407 aa11.97□□□□□ -0.49
RN7SKP253-201ENST00000516424 FSHRP23945 695 aa11.97□□□□□ -0.49
RN7SKP253-201ENST00000516424 IRF7Q92985 503 aa11.97□□□□□ -0.49
RN7SKP253-201ENST00000516424 ERBB4Q15303 1308 aa11.95□□□□□ -0.5
RN7SKP253-201ENST00000516424 C6orf118Q5T5N4 469 aa11.95□□□□□ -0.5
RN7SKP253-201ENST00000516424 CARD14Q9BXL6 1004 aa11.95□□□□□ -0.5
RN7SKP253-201ENST00000516424 FBXO31Q5XUX0 539 aaPredicted RBP11.94□□□□□ -0.5
RN7SKP253-201ENST00000516424 VASH1Q7L8A9 365 aaPredicted RBP11.94□□□□□ -0.5
RN7SKP253-201ENST00000516424 TRMT44Q8IYL2 757 aaKnown RBP11.94□□□□□ -0.5
RN7SKP253-201ENST00000516424 GPBP1L1Q9HC44 474 aaPredicted RBP11.94□□□□□ -0.5
RN7SKP253-201ENST00000516424 MAP4K5Q9Y4K4 846 aa11.94□□□□□ -0.5
RN7SKP253-201ENST00000516424 LRRN4Q8WUT4 740 aa11.93□□□□□ -0.5
RN7SKP253-201ENST00000516424 MEIOBQ8N635 442 aa11.92□□□□□ -0.5
RN7SKP253-201ENST00000516424 KDM4CQ9H3R0 1056 aa11.92□□□□□ -0.5
RN7SKP253-201ENST00000516424 SKIV2LQ15477 1246 aaKnown RBP11.91□□□□□ -0.5
RN7SKP253-201ENST00000516424 ERFEQ4G0M1 354 aa11.91□□□□□ -0.5
RN7SKP253-201ENST00000516424 LINC00528Q8N1L1 170 aa11.91□□□□□ -0.5
RN7SKP253-201ENST00000516424 PROCA1Q8NCQ7 364 aaPredicted RBP11.91□□□□□ -0.5
RN7SKP253-201ENST00000516424 GPKOWQ92917 476 aaPredicted RBP eCLIP11.91□□□□□ -0.5
RN7SKP253-201ENST00000516424 BMP2P12643 396 aa11.9□□□□□ -0.5
RN7SKP253-201ENST00000516424 FAM117AQ9C073 453 aa11.9□□□□□ -0.5
RN7SKP253-201ENST00000516424 MAN1A2O60476 641 aa11.89□□□□□ -0.51
RN7SKP253-201ENST00000516424 SH3D19Q5HYK7 790 aa11.89□□□□□ -0.51
RN7SKP253-201ENST00000516424 UPP2O95045 317 aa11.88□□□□□ -0.51
RN7SKP253-201ENST00000516424 LORP23490 312 aaPredicted RBP11.88□□□□□ -0.51
RN7SKP253-201ENST00000516424 CCDC116Q8IYX3 515 aa11.88□□□□□ -0.51
RN7SKP253-201ENST00000516424 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.88□□□□□ -0.51
RN7SKP253-201ENST00000516424 FKBPLQ9UIM3 349 aa11.88□□□□□ -0.51
RN7SKP253-201ENST00000516424 NR6A1Q15406 480 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms