RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 ATAD2Q6PL18 1390 aa27.33■■□□□ 1.97
LMNA-225ENST00000515824 TRPM3Q9HCF6 1732 aaPredicted RBP27.33■■□□□ 1.96
LMNA-225ENST00000515824 QTRT2Q9H974 415 aaKnown RBP27.32■■□□□ 1.96
LMNA-225ENST00000515824 RXRBP28702 533 aa27.3■■□□□ 1.96
LMNA-225ENST00000515824 ZNF692Q9BU19 519 aaPredicted RBP27.29■■□□□ 1.96
LMNA-225ENST00000515824 BRD4O60885 1362 aaPredicted RBP27.28■■□□□ 1.96
LMNA-225ENST00000515824 ABTB2Q8N961 1025 aa27.28■■□□□ 1.96
LMNA-225ENST00000515824 ALS2Q96Q42 1657 aa27.27■■□□□ 1.96
LMNA-225ENST00000515824 USP47Q96K76 1375 aa27.27■■□□□ 1.96
LMNA-225ENST00000515824 PUS7Q96PZ0 661 aaKnown RBP27.27■■□□□ 1.96
LMNA-225ENST00000515824 TESK2Q96S53 571 aa27.27■■□□□ 1.96
LMNA-225ENST00000515824 TRPC5Q9UL62 973 aaPredicted RBP27.26■■□□□ 1.95
LMNA-225ENST00000515824 RBM6P78332 1123 aaKnown RBP27.24■■□□□ 1.95
LMNA-225ENST00000515824 NUTM2GQ5VZR2 741 aa27.24■■□□□ 1.95
LMNA-225ENST00000515824 TMC1Q8TDI8 760 aa27.23■■□□□ 1.95
LMNA-225ENST00000515824 USP6P35125 1406 aa27.23■■□□□ 1.95
LMNA-225ENST00000515824 MARF1Q9Y4F3 1742 aaKnown RBP27.21■■□□□ 1.95
LMNA-225ENST00000515824 NLRP13Q86W25 1043 aa27.21■■□□□ 1.95
LMNA-225ENST00000515824 UNC5CLQ8IV45 518 aa27.21■■□□□ 1.95
LMNA-225ENST00000515824 FAM83GA6ND36 823 aa27.2■■□□□ 1.94
LMNA-225ENST00000515824 TMF1P82094 1093 aa27.2■■□□□ 1.94
LMNA-225ENST00000515824 BCL9LQ86UU0 1499 aa27.19■■□□□ 1.94
LMNA-225ENST00000515824 SLIT2O94813 1529 aa27.18■■□□□ 1.94
LMNA-225ENST00000515824 SLC12A5Q9H2X9 1139 aa27.17■■□□□ 1.94
LMNA-225ENST00000515824 CPSF1Q10570 1443 aaKnown RBP27.16■■□□□ 1.94
LMNA-225ENST00000515824 HDGFL2Q7Z4V5 671 aaPredicted RBP27.16■■□□□ 1.94
LMNA-225ENST00000515824 KTN1Q86UP2 1357 aaKnown RBP27.16■■□□□ 1.94
LMNA-225ENST00000515824 ABCA3Q99758 1704 aa27.16■■□□□ 1.94
LMNA-225ENST00000515824 ATRNO75882 1429 aa27.16■■□□□ 1.94
LMNA-225ENST00000515824 SSH2Q76I76 1423 aa27.16■■□□□ 1.94
LMNA-225ENST00000515824 TTC21BQ7Z4L5 1316 aa27.16■■□□□ 1.94
LMNA-225ENST00000515824 NLRP6P59044 892 aa27.15■■□□□ 1.94
LMNA-225ENST00000515824 PRDM11Q9NQV5 511 aa27.15■■□□□ 1.94
LMNA-225ENST00000515824 CDCA8Q53HL2 280 aa27.14■■□□□ 1.94
LMNA-225ENST00000515824 TERF2IPQ9NYB0 399 aa27.14■■□□□ 1.94
LMNA-225ENST00000515824 CDK12Q9NYV4 1490 aaPredicted RBP27.13■■□□□ 1.93
LMNA-225ENST00000515824 GJD4Q96KN9 370 aaPredicted RBP27.13■■□□□ 1.93
LMNA-225ENST00000515824 TTC21AQ8NDW8 1320 aa27.13■■□□□ 1.93
LMNA-225ENST00000515824 ZC3H6P61129 1189 aaKnown RBP27.12■■□□□ 1.93
LMNA-225ENST00000515824 BTG4Q9NY30 223 aa27.12■■□□□ 1.93
LMNA-225ENST00000515824 USP19O94966 1318 aa27.12■■□□□ 1.93
LMNA-225ENST00000515824 NINLQ9Y2I6 1382 aa27.11■■□□□ 1.93
LMNA-225ENST00000515824 GCP02774 474 aa27.11■■□□□ 1.93
LMNA-225ENST00000515824 KIAA0232Q92628 1395 aa27.09■■□□□ 1.93
LMNA-225ENST00000515824 EIF4G2P78344 907 aaKnown RBP eCLIP27.09■■□□□ 1.93
LMNA-225ENST00000515824 VPS72Q15906 364 aa27.09■■□□□ 1.93
LMNA-225ENST00000515824 CRYBG1Q9Y4K1 1723 aa27.09■■□□□ 1.93
LMNA-225ENST00000515824 CCDC9Q9Y3X0 531 aaKnown RBP27.08■■□□□ 1.93
LMNA-225ENST00000515824 AKAP12Q02952 1782 aa27.07■■□□□ 1.92
LMNA-225ENST00000515824 CHRNA2Q15822 529 aa27.07■■□□□ 1.92
LMNA-225ENST00000515824 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.07■■□□□ 1.92
LMNA-225ENST00000515824 CD163L1Q9NR16 1453 aa27.06■■□□□ 1.92
LMNA-225ENST00000515824 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.06■■□□□ 1.92
LMNA-225ENST00000515824 COL14A1Q05707 1796 aaKnown RBP27.06■■□□□ 1.92
LMNA-225ENST00000515824 PHRF1Q9P1Y6 1649 aaKnown RBP27.05■■□□□ 1.92
LMNA-225ENST00000515824 NWD2Q9ULI1 1742 aa27.05■■□□□ 1.92
LMNA-225ENST00000515824 A0A1W2PP64 1363 aa27.04■■□□□ 1.92
LMNA-225ENST00000515824 CPDO75976 1380 aa27.04■■□□□ 1.92
LMNA-225ENST00000515824 RGS12O14924 1447 aa27.04■■□□□ 1.92
LMNA-225ENST00000515824 PLCH1Q4KWH8 1693 aa27.04■■□□□ 1.92
LMNA-225ENST00000515824 KCNH5Q8NCM2 988 aa27.03■■□□□ 1.92
LMNA-225ENST00000515824 EDC4Q6P2E9 1401 aaKnown RBP27.01■■□□□ 1.91
LMNA-225ENST00000515824 HSPA5P11021 654 aaKnown RBP27.01■■□□□ 1.91
LMNA-225ENST00000515824 NRKQ7Z2Y5 1582 aa27.01■■□□□ 1.91
LMNA-225ENST00000515824 MON2Q7Z3U7 1717 aa27■■□□□ 1.91
LMNA-225ENST00000515824 EVA1CP58658 441 aa27■■□□□ 1.91
LMNA-225ENST00000515824 PIK3C2AO00443 1686 aa27■■□□□ 1.91
LMNA-225ENST00000515824 NME9Q86XW9 330 aa26.99■■□□□ 1.91
LMNA-225ENST00000515824 ZBTB7CA1YPR0 619 aa26.98■■□□□ 1.91
LMNA-225ENST00000515824 STRN4Q9NRL3 753 aa26.98■■□□□ 1.91
LMNA-225ENST00000515824 SLIT3O75094 1523 aa26.98■■□□□ 1.91
LMNA-225ENST00000515824 USP31Q70CQ4 1352 aa26.97■■□□□ 1.91
LMNA-225ENST00000515824 ANKRD36BQ8N2N9 1353 aa26.97■■□□□ 1.91
LMNA-225ENST00000515824 SOX12O15370 315 aa26.96■■□□□ 1.91
LMNA-225ENST00000515824 ZRANB1Q9UGI0 708 aa26.96■■□□□ 1.91
LMNA-225ENST00000515824 GLI3P10071 1580 aa26.95■■□□□ 1.9
LMNA-225ENST00000515824 SPATA31A5Q5VU36 1347 aa26.94■■□□□ 1.9
LMNA-225ENST00000515824 SPATA31A7Q8IWB4 1347 aa26.94■■□□□ 1.9
LMNA-225ENST00000515824 NRAPQ86VF7 1730 aa26.94■■□□□ 1.9
LMNA-225ENST00000515824 ONECUT3O60422 494 aaPredicted RBP26.94■■□□□ 1.9
LMNA-225ENST00000515824 ARHGEF25Q86VW2 580 aa26.93■■□□□ 1.9
LMNA-225ENST00000515824 AATKQ6ZMQ8 1374 aa26.93■■□□□ 1.9
LMNA-225ENST00000515824 SEPT12Q8IYM1 358 aa26.92■■□□□ 1.9
LMNA-225ENST00000515824 POLR3GLQ9BT43 218 aa26.92■■□□□ 1.9
LMNA-225ENST00000515824 CAMTA1Q9Y6Y1 1673 aa26.9■■□□□ 1.9
LMNA-225ENST00000515824 A0A0G2JS52 829 aa26.9■■□□□ 1.9
LMNA-225ENST00000515824 MYT1Q01538 1121 aa26.9■■□□□ 1.9
LMNA-225ENST00000515824 FAM98CQ17RN3 349 aaKnown RBP26.9■■□□□ 1.9
LMNA-225ENST00000515824 UPF1Q92900 1129 aaKnown RBP eCLIP26.9■■□□□ 1.9
LMNA-225ENST00000515824 SPATA31A1Q5TZJ5 1347 aa26.9■■□□□ 1.9
LMNA-225ENST00000515824 COG3Q96JB2 828 aa26.88■■□□□ 1.89
LMNA-225ENST00000515824 LARP1Q6PKG0 1096 aaKnown RBP26.87■■□□□ 1.89
LMNA-225ENST00000515824 LMO7Q8WWI1 1683 aa26.86■■□□□ 1.89
LMNA-225ENST00000515824 USP35Q9P2H5 1018 aa26.86■■□□□ 1.89
LMNA-225ENST00000515824 AXIN2Q9Y2T1 843 aa26.85■■□□□ 1.89
LMNA-225ENST00000515824 OVOS2A0A0J9YW53 1432 aa26.84■■□□□ 1.89
LMNA-225ENST00000515824 OVOS2Q6IE36 1432 aa26.84■■□□□ 1.89
LMNA-225ENST00000515824 COL5A2P05997 1499 aaPredicted RBP26.83■■□□□ 1.89
LMNA-225ENST00000515824 FYB1O15117 783 aa26.83■■□□□ 1.89
LMNA-225ENST00000515824 NFAT5O94916 1531 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms