RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 NRKQ7Z2Y5 1582 aa26.7■■□□□ 1.86
TRIO-223ENST00000515710 SENP3-EIF4A1A0A087X0R7 540 aa26.69■■□□□ 1.86
TRIO-223ENST00000515710 NGDNQ8NEJ9 315 aaKnown RBP26.69■■□□□ 1.86
TRIO-223ENST00000515710 PMFBP1Q8TBY8 1022 aa26.69■■□□□ 1.86
TRIO-223ENST00000515710 SSH2Q76I76 1423 aa26.68■■□□□ 1.86
TRIO-223ENST00000515710 AATKQ6ZMQ8 1374 aa26.68■■□□□ 1.86
TRIO-223ENST00000515710 TTC21AQ8NDW8 1320 aa26.68■■□□□ 1.86
TRIO-223ENST00000515710 NGEFQ8N5V2 710 aa26.67■■□□□ 1.86
TRIO-223ENST00000515710 SALL2Q9Y467 1007 aaPredicted RBP26.67■■□□□ 1.86
TRIO-223ENST00000515710 PNPLA6Q8IY17 1366 aa26.66■■□□□ 1.86
TRIO-223ENST00000515710 HSPA2P54652 639 aa26.66■■□□□ 1.86
TRIO-223ENST00000515710 PROSER2Q86WR7 435 aaPredicted RBP26.66■■□□□ 1.86
TRIO-223ENST00000515710 RGPD8O14715 1765 aaPredicted RBP26.65■■□□□ 1.86
TRIO-223ENST00000515710 POLKQ9UBT6 870 aa26.65■■□□□ 1.86
TRIO-223ENST00000515710 LMTK3Q96Q04 1460 aa26.64■■□□□ 1.86
TRIO-223ENST00000515710 NEFLP07196 543 aa26.64■■□□□ 1.86
TRIO-223ENST00000515710 RBM33Q96EV2 1170 aaKnown RBP26.64■■□□□ 1.86
TRIO-223ENST00000515710 ZRANB1Q9UGI0 708 aa26.64■■□□□ 1.86
TRIO-223ENST00000515710 SUPT16HQ9Y5B9 1047 aaKnown RBP26.64■■□□□ 1.86
TRIO-223ENST00000515710 COL3A1P02461 1466 aaPredicted RBP26.63■■□□□ 1.85
TRIO-223ENST00000515710 C14orf37Q86TY3 774 aa26.63■■□□□ 1.85
TRIO-223ENST00000515710 CCDC146Q8IYE0 955 aa26.63■■□□□ 1.85
TRIO-223ENST00000515710 RUNDC1Q96C34 613 aa26.61■■□□□ 1.85
TRIO-223ENST00000515710 PHF8Q9UPP1 1060 aa26.61■■□□□ 1.85
TRIO-223ENST00000515710 APAF1O14727 1248 aa26.6■■□□□ 1.85
TRIO-223ENST00000515710 DIAPH1O60610 1272 aaKnown RBP26.6■■□□□ 1.85
TRIO-223ENST00000515710 OVOS2A0A0J9YW53 1432 aa26.6■■□□□ 1.85
TRIO-223ENST00000515710 OVOS2Q6IE36 1432 aa26.6■■□□□ 1.85
TRIO-223ENST00000515710 NCOA3Q9Y6Q9 1424 aa26.59■■□□□ 1.85
TRIO-223ENST00000515710 U2AF1L5P0DN76 240 aaPredicted RBP26.58■■□□□ 1.85
TRIO-223ENST00000515710 U2AF1Q01081 240 aaKnown RBP eCLIP26.58■■□□□ 1.85
TRIO-223ENST00000515710 USP31Q70CQ4 1352 aa26.58■■□□□ 1.84
TRIO-223ENST00000515710 ZNF521Q96K83 1311 aa26.57■■□□□ 1.84
TRIO-223ENST00000515710 C19orf44Q9H6X5 657 aa26.57■■□□□ 1.84
TRIO-223ENST00000515710 MAP2P11137 1827 aaKnown RBP26.56■■□□□ 1.84
TRIO-223ENST00000515710 FBLN1P23142 703 aa26.55■■□□□ 1.84
TRIO-223ENST00000515710 FKBP8Q14318 412 aa26.55■■□□□ 1.84
TRIO-223ENST00000515710 NCBP3Q53F19 620 aaKnown RBP26.55■■□□□ 1.84
TRIO-223ENST00000515710 CDK12Q9NYV4 1490 aaPredicted RBP26.54■■□□□ 1.84
TRIO-223ENST00000515710 U2SURPO15042 1029 aaKnown RBP26.54■■□□□ 1.84
TRIO-223ENST00000515710 PNNQ9H307 717 aaKnown RBP26.54■■□□□ 1.84
TRIO-223ENST00000515710 PPM1GO15355 546 aaPredicted RBP26.53■■□□□ 1.84
TRIO-223ENST00000515710 EMILIN1Q9Y6C2 1016 aa26.53■■□□□ 1.84
TRIO-223ENST00000515710 ESCO1Q5FWF5 840 aa26.53■■□□□ 1.84
TRIO-223ENST00000515710 CDCA7LQ96GN5 454 aa26.52■■□□□ 1.84
TRIO-223ENST00000515710 GOLGA2Q08379 1002 aa26.51■■□□□ 1.83
TRIO-223ENST00000515710 STRCQ7RTU9 1775 aa26.5■■□□□ 1.83
TRIO-223ENST00000515710 TMEM94Q12767 1356 aa26.5■■□□□ 1.83
TRIO-223ENST00000515710 RRS1Q15050 365 aaKnown RBP26.49■■□□□ 1.83
TRIO-223ENST00000515710 TCP11L2Q8N4U5 519 aa26.49■■□□□ 1.83
TRIO-223ENST00000515710 IQSEC2Q5JU85 1478 aa26.49■■□□□ 1.83
TRIO-223ENST00000515710 STRCP1A6NGW2 1772 aa26.49■■□□□ 1.83
TRIO-223ENST00000515710 DCCP43146 1447 aa26.48■■□□□ 1.83
TRIO-223ENST00000515710 PLEKHF1Q96S99 279 aa26.47■■□□□ 1.83
TRIO-223ENST00000515710 PIK3C2AO00443 1686 aa26.46■■□□□ 1.83
TRIO-223ENST00000515710 FCHSD2O94868 740 aa26.46■■□□□ 1.83
TRIO-223ENST00000515710 IL13P35225 146 aa26.46■■□□□ 1.83
TRIO-223ENST00000515710 PSME1Q06323 249 aa26.46■■□□□ 1.83
TRIO-223ENST00000515710 NLRP6P59044 892 aa26.45■■□□□ 1.83
TRIO-223ENST00000515710 CCDC27Q2M243 656 aa26.45■■□□□ 1.83
TRIO-223ENST00000515710 RNF123Q5XPI4 1314 aa26.45■■□□□ 1.82
TRIO-223ENST00000515710 ATF3P18847 181 aa26.45■■□□□ 1.82
TRIO-223ENST00000515710 USP54Q70EL1 1684 aa26.44■■□□□ 1.82
TRIO-223ENST00000515710 SLFN5Q08AF3 891 aa26.44■■□□□ 1.82
TRIO-223ENST00000515710 ABTB2Q8N961 1025 aa26.44■■□□□ 1.82
TRIO-223ENST00000515710 C1orf167Q5SNV9 1468 aa26.44■■□□□ 1.82
TRIO-223ENST00000515710 LRRC7Q96NW7 1537 aa26.44■■□□□ 1.82
TRIO-223ENST00000515710 PAK3O75914 559 aaPredicted RBP26.43■■□□□ 1.82
TRIO-223ENST00000515710 WWC1Q8IX03 1113 aa26.43■■□□□ 1.82
TRIO-223ENST00000515710 ORAI2Q96SN7 254 aa26.43■■□□□ 1.82
TRIO-223ENST00000515710 ERICH6BQ5W0A0 696 aa26.43■■□□□ 1.82
TRIO-223ENST00000515710 PHF23Q9BUL5 403 aaPredicted RBP26.43■■□□□ 1.82
TRIO-223ENST00000515710 TRMT2AQ8IZ69 625 aaKnown RBP26.42■■□□□ 1.82
TRIO-223ENST00000515710 MAPK8IP3Q9UPT6 1336 aa26.42■■□□□ 1.82
TRIO-223ENST00000515710 DUSP27Q5VZP5 1158 aa26.41■■□□□ 1.82
TRIO-223ENST00000515710 E9PSI1 815 aa26.41■■□□□ 1.82
TRIO-223ENST00000515710 RCAN3Q9UKA8 241 aa26.41■■□□□ 1.82
TRIO-223ENST00000515710 CADPS2Q86UW7 1296 aa26.4■■□□□ 1.82
TRIO-223ENST00000515710 KIF1AQ12756 1690 aa26.4■■□□□ 1.82
TRIO-223ENST00000515710 WDR63Q8IWG1 891 aa26.39■■□□□ 1.82
TRIO-223ENST00000515710 RSPH6AQ9H0K4 717 aa26.39■■□□□ 1.81
TRIO-223ENST00000515710 MST1RQ04912 1400 aa26.38■■□□□ 1.81
TRIO-223ENST00000515710 NEFMP07197 916 aa26.38■■□□□ 1.81
TRIO-223ENST00000515710 NEUROD2Q15784 382 aa26.38■■□□□ 1.81
TRIO-223ENST00000515710 RRP7AQ9Y3A4 280 aaKnown RBP26.38■■□□□ 1.81
TRIO-223ENST00000515710 MSH6P52701 1360 aa26.38■■□□□ 1.81
TRIO-223ENST00000515710 MAP3K19Q56UN5 1328 aa26.37■■□□□ 1.81
TRIO-223ENST00000515710 SBNO1A3KN83 1393 aa26.37■■□□□ 1.81
TRIO-223ENST00000515710 KIF24Q5T7B8 1368 aa26.37■■□□□ 1.81
TRIO-223ENST00000515710 FOXO3O43524 673 aa26.36■■□□□ 1.81
TRIO-223ENST00000515710 TMPOP42166 694 aaKnown RBP26.36■■□□□ 1.81
TRIO-223ENST00000515710 DMRT2Q9Y5R5 561 aa26.36■■□□□ 1.81
TRIO-223ENST00000515710 SOX12O15370 315 aa26.35■■□□□ 1.81
TRIO-223ENST00000515710 FLT4P35916 1363 aa26.35■■□□□ 1.81
TRIO-223ENST00000515710 EIF4A2Q14240 407 aaKnown RBP26.35■■□□□ 1.81
TRIO-223ENST00000515710 MARF1Q9Y4F3 1742 aaKnown RBP26.34■■□□□ 1.81
TRIO-223ENST00000515710 NUTM2GQ5VZR2 741 aa26.34■■□□□ 1.81
TRIO-223ENST00000515710 PEAK1Q9H792 1746 aa26.34■■□□□ 1.81
TRIO-223ENST00000515710 PRKAR2BP31323 418 aa26.33■■□□□ 1.81
TRIO-223ENST00000515710 AMPHP49418 695 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms