RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 CFAP44Q96MT7 982 aa16.7■□□□□ 0.26
SH3TC1-225ENST00000515682 TRIM6-TRIM34B2RNG4 842 aa16.7■□□□□ 0.26
SH3TC1-225ENST00000515682 SYAP1Q96A49 352 aaPredicted RBP16.7■□□□□ 0.26
SH3TC1-225ENST00000515682 NSD3Q9BZ95 1437 aa16.7■□□□□ 0.26
SH3TC1-225ENST00000515682 RBM42Q9BTD8 480 aaKnown RBP16.7■□□□□ 0.26
SH3TC1-225ENST00000515682 USP19O94966 1318 aa16.69■□□□□ 0.26
SH3TC1-225ENST00000515682 DIAPH1O60610 1272 aaKnown RBP16.69■□□□□ 0.26
SH3TC1-225ENST00000515682 POGZQ7Z3K3 1410 aa16.69■□□□□ 0.26
SH3TC1-225ENST00000515682 UQCRHLA0A096LP55 91 aa16.68■□□□□ 0.26
SH3TC1-225ENST00000515682 UQCRHP07919 91 aa16.68■□□□□ 0.26
SH3TC1-225ENST00000515682 ADGRF5Q8IZF2 1346 aa16.67■□□□□ 0.26
SH3TC1-225ENST00000515682 ANTXR1Q9H6X2 564 aa16.67■□□□□ 0.26
SH3TC1-225ENST00000515682 MBD5Q9P267 1494 aa16.66■□□□□ 0.26
SH3TC1-225ENST00000515682 DRC7Q8IY82 874 aa16.66■□□□□ 0.26
SH3TC1-225ENST00000515682 CARD14Q9BXL6 1004 aa16.66■□□□□ 0.26
SH3TC1-225ENST00000515682 PDCL3Q9H2J4 239 aa16.65■□□□□ 0.26
SH3TC1-225ENST00000515682 CSPP1Q1MSJ5 1256 aa16.65■□□□□ 0.26
SH3TC1-225ENST00000515682 GPRASP1Q5JY77 1395 aa16.65■□□□□ 0.26
SH3TC1-225ENST00000515682 A0A0U1RQG5 324 aaPredicted RBP16.65■□□□□ 0.26
SH3TC1-225ENST00000515682 RILPL2Q969X0 211 aa16.65■□□□□ 0.26
SH3TC1-225ENST00000515682 ITSN2Q9NZM3 1697 aa16.65■□□□□ 0.26
SH3TC1-225ENST00000515682 ASXL1Q8IXJ9 1541 aa16.65■□□□□ 0.26
SH3TC1-225ENST00000515682 ZNF521Q96K83 1311 aa16.65■□□□□ 0.26
SH3TC1-225ENST00000515682 TMPOP42166 694 aaKnown RBP16.65■□□□□ 0.26
SH3TC1-225ENST00000515682 PSME1Q06323 249 aa16.64■□□□□ 0.25
SH3TC1-225ENST00000515682 INTS3Q68E01 1043 aaKnown RBP16.64■□□□□ 0.25
SH3TC1-225ENST00000515682 PRDM10Q9NQV6 1147 aa16.64■□□□□ 0.25
SH3TC1-225ENST00000515682 FAM135AQ9P2D6 1515 aa16.64■□□□□ 0.25
SH3TC1-225ENST00000515682 THUMPD2Q9BTF0 503 aaKnown RBP16.64■□□□□ 0.25
SH3TC1-225ENST00000515682 A2MP01023 1474 aa16.63■□□□□ 0.25
SH3TC1-225ENST00000515682 RABEP1Q15276 862 aa16.63■□□□□ 0.25
SH3TC1-225ENST00000515682 SYCE3A1L190 88 aa16.63■□□□□ 0.25
SH3TC1-225ENST00000515682 REC8O95072 547 aa16.63■□□□□ 0.25
SH3TC1-225ENST00000515682 BAG4O95429 457 aaKnown RBP16.62■□□□□ 0.25
SH3TC1-225ENST00000515682 PRKAR2BP31323 418 aa16.62■□□□□ 0.25
SH3TC1-225ENST00000515682 ZNF518AQ6AHZ1 1483 aa16.62■□□□□ 0.25
SH3TC1-225ENST00000515682 TBC1D9Q6ZT07 1266 aa16.62■□□□□ 0.25
SH3TC1-225ENST00000515682 NEK4P51957 841 aa16.62■□□□□ 0.25
SH3TC1-225ENST00000515682 GCC1Q96CN9 775 aa16.62■□□□□ 0.25
SH3TC1-225ENST00000515682 MAP7D2Q96T17 732 aa16.62■□□□□ 0.25
SH3TC1-225ENST00000515682 CDK19Q9BWU1 502 aa16.62■□□□□ 0.25
SH3TC1-225ENST00000515682 RBM27Q9P2N5 1060 aaKnown RBP16.62■□□□□ 0.25
SH3TC1-225ENST00000515682 CCDC39Q9UFE4 941 aa16.62■□□□□ 0.25
SH3TC1-225ENST00000515682 SCAF11Q99590 1463 aaKnown RBP16.61■□□□□ 0.25
SH3TC1-225ENST00000515682 GAS2L3Q86XJ1 694 aa16.61■□□□□ 0.25
SH3TC1-225ENST00000515682 ANO2Q9NQ90 1003 aa16.61■□□□□ 0.25
SH3TC1-225ENST00000515682 CABP1Q9NZU7 370 aa16.61■□□□□ 0.25
SH3TC1-225ENST00000515682 ANKLE2Q86XL3 938 aa16.61■□□□□ 0.25
SH3TC1-225ENST00000515682 PIK3C2GO75747 1445 aa16.61■□□□□ 0.25
SH3TC1-225ENST00000515682 FSD2A1L4K1 749 aa16.6■□□□□ 0.25
SH3TC1-225ENST00000515682 GOLGA6L4A6NEF3 574 aa16.6■□□□□ 0.25
SH3TC1-225ENST00000515682 BCL11BQ9C0K0 894 aaPredicted RBP16.6■□□□□ 0.25
SH3TC1-225ENST00000515682 KCNJ4P48050 445 aa16.6■□□□□ 0.25
SH3TC1-225ENST00000515682 GAS2L2Q8NHY3 880 aa16.6■□□□□ 0.25
SH3TC1-225ENST00000515682 PHF14O94880 888 aa16.6■□□□□ 0.25
SH3TC1-225ENST00000515682 NUTM2GQ5VZR2 741 aa16.6■□□□□ 0.25
SH3TC1-225ENST00000515682 MAGI2Q86UL8 1455 aa16.59■□□□□ 0.25
SH3TC1-225ENST00000515682 HMMRO75330 724 aa16.59■□□□□ 0.25
SH3TC1-225ENST00000515682 API5Q9BZZ5 524 aaKnown RBP16.59■□□□□ 0.25
SH3TC1-225ENST00000515682 DUOX2Q9NRD8 1548 aa16.59■□□□□ 0.25
SH3TC1-225ENST00000515682 CT47B1P0C2W7 299 aaPredicted RBP16.59■□□□□ 0.25
SH3TC1-225ENST00000515682 TRMT2AQ8IZ69 625 aaKnown RBP16.59■□□□□ 0.25
SH3TC1-225ENST00000515682 CHMP3Q9Y3E7 222 aa16.59■□□□□ 0.25
SH3TC1-225ENST00000515682 INSRP06213 1382 aa16.59■□□□□ 0.25
SH3TC1-225ENST00000515682 OS9Q13438 667 aaPredicted RBP16.58■□□□□ 0.25
SH3TC1-225ENST00000515682 WAPLQ7Z5K2 1190 aa16.58■□□□□ 0.25
SH3TC1-225ENST00000515682 PROSER2Q86WR7 435 aaPredicted RBP16.58■□□□□ 0.25
SH3TC1-225ENST00000515682 ADGRL2O95490 1459 aa16.58■□□□□ 0.24
SH3TC1-225ENST00000515682 HDAC1Q13547 482 aaPredicted RBP16.58■□□□□ 0.24
SH3TC1-225ENST00000515682 RAB3GAP1Q15042 981 aa16.58■□□□□ 0.24
SH3TC1-225ENST00000515682 PPP6R1Q9UPN7 881 aa16.58■□□□□ 0.24
SH3TC1-225ENST00000515682 ATF3P18847 181 aa16.57■□□□□ 0.24
SH3TC1-225ENST00000515682 KLHL40Q2TBA0 621 aa16.57■□□□□ 0.24
SH3TC1-225ENST00000515682 ABCC10Q5T3U5 1492 aa16.57■□□□□ 0.24
SH3TC1-225ENST00000515682 NLRP6P59044 892 aa16.56■□□□□ 0.24
SH3TC1-225ENST00000515682 BMP2KLQ5H9B9 411 aa16.56■□□□□ 0.24
SH3TC1-225ENST00000515682 SMC5Q8IY18 1101 aa16.56■□□□□ 0.24
SH3TC1-225ENST00000515682 NUCB1Q02818 461 aa16.56■□□□□ 0.24
SH3TC1-225ENST00000515682 TWISTNBQ3B726 338 aaPredicted RBP16.55■□□□□ 0.24
SH3TC1-225ENST00000515682 GNAI1P63096 354 aa16.55■□□□□ 0.24
SH3TC1-225ENST00000515682 ZSCAN23Q3MJ62 389 aa16.55■□□□□ 0.24
SH3TC1-225ENST00000515682 SNX21Q969T3 373 aa16.54■□□□□ 0.24
SH3TC1-225ENST00000515682 TSPY26PQ9H489 355 aa16.54■□□□□ 0.24
SH3TC1-225ENST00000515682 NOS1P29475 1434 aa16.54■□□□□ 0.24
SH3TC1-225ENST00000515682 LMOD3Q0VAK6 560 aa16.54■□□□□ 0.24
SH3TC1-225ENST00000515682 CDK11BP21127 795 aaKnown RBP16.54■□□□□ 0.24
SH3TC1-225ENST00000515682 ERBB4Q15303 1308 aa16.54■□□□□ 0.24
SH3TC1-225ENST00000515682 MBD3O95983 291 aa16.53■□□□□ 0.24
SH3TC1-225ENST00000515682 SMARCA5O60264 1052 aaPredicted RBP16.53■□□□□ 0.24
SH3TC1-225ENST00000515682 ESCO1Q5FWF5 840 aa16.53■□□□□ 0.24
SH3TC1-225ENST00000515682 ZHX1Q9UKY1 873 aaPredicted RBP16.53■□□□□ 0.24
SH3TC1-225ENST00000515682 LRRIQ1Q96JM4 1722 aa16.53■□□□□ 0.24
SH3TC1-225ENST00000515682 PRIM1P49642 420 aaKnown RBP16.52■□□□□ 0.24
SH3TC1-225ENST00000515682 TAOK2Q9UL54 1235 aa16.52■□□□□ 0.24
SH3TC1-225ENST00000515682 SHANK2Q9UPX8 1470 aa16.52■□□□□ 0.24
SH3TC1-225ENST00000515682 MTERF4Q7Z6M4 381 aaKnown RBP16.52■□□□□ 0.24
SH3TC1-225ENST00000515682 NECTIN2Q92692 538 aa16.52■□□□□ 0.24
SH3TC1-225ENST00000515682 CCDC9Q9Y3X0 531 aaKnown RBP16.52■□□□□ 0.23
SH3TC1-225ENST00000515682 ABCA8O94911 1581 aa16.52■□□□□ 0.23
SH3TC1-225ENST00000515682 RTEL1-TNFRSF6BF6WH68 1400 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms