RNA–Protein interactions for RNA: ENST00000515621.5

NR1I3-234, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-234ENST00000515621 ANKRD26Q9UPS8 1709 aa12.28□□□□□ -0.44
NR1I3-234ENST00000515621 MRS2Q9HD23 443 aa12.27□□□□□ -0.45
NR1I3-234ENST00000515621 AKAP12Q02952 1782 aa12.26□□□□□ -0.45
NR1I3-234ENST00000515621 STRCQ7RTU9 1775 aa12.26□□□□□ -0.45
NR1I3-234ENST00000515621 CABP1Q9NZU7 370 aa12.26□□□□□ -0.45
NR1I3-234ENST00000515621 PRR36Q9H6K5 1346 aa12.26□□□□□ -0.45
NR1I3-234ENST00000515621 NRKQ7Z2Y5 1582 aa12.26□□□□□ -0.45
NR1I3-234ENST00000515621 CC2D1BQ5T0F9 858 aaKnown RBP12.24□□□□□ -0.45
NR1I3-234ENST00000515621 LRRC7Q96NW7 1537 aa12.24□□□□□ -0.45
NR1I3-234ENST00000515621 KIF20BQ96Q89 1820 aa12.23□□□□□ -0.45
NR1I3-234ENST00000515621 USP6P35125 1406 aa12.23□□□□□ -0.45
NR1I3-234ENST00000515621 TTC21AQ8NDW8 1320 aa12.23□□□□□ -0.45
NR1I3-234ENST00000515621 PPP2R1AP30153 589 aa12.23□□□□□ -0.45
NR1I3-234ENST00000515621 ZBTB12Q9Y330 459 aaPredicted RBP12.23□□□□□ -0.45
NR1I3-234ENST00000515621 SSH2Q76I76 1423 aa12.22□□□□□ -0.45
NR1I3-234ENST00000515621 MORC1Q86VD1 984 aa12.22□□□□□ -0.45
NR1I3-234ENST00000515621 PNISRQ8TF01 805 aaKnown RBP12.22□□□□□ -0.45
NR1I3-234ENST00000515621 C19orf44Q9H6X5 657 aa12.21□□□□□ -0.45
NR1I3-234ENST00000515621 KIF1AQ12756 1690 aa12.21□□□□□ -0.45
NR1I3-234ENST00000515621 AATKQ6ZMQ8 1374 aa12.2□□□□□ -0.46
NR1I3-234ENST00000515621 USP54Q70EL1 1684 aa12.2□□□□□ -0.46
NR1I3-234ENST00000515621 FYB1O15117 783 aa12.2□□□□□ -0.46
NR1I3-234ENST00000515621 HSPA2P54652 639 aa12.2□□□□□ -0.46
NR1I3-234ENST00000515621 PROSER2Q86WR7 435 aaPredicted RBP12.2□□□□□ -0.46
NR1I3-234ENST00000515621 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
NR1I3-234ENST00000515621 ACEP12821 1306 aa12.19□□□□□ -0.46
NR1I3-234ENST00000515621 TMEM94Q12767 1356 aa12.18□□□□□ -0.46
NR1I3-234ENST00000515621 USP31Q70CQ4 1352 aa12.18□□□□□ -0.46
NR1I3-234ENST00000515621 CCDC184Q52MB2 194 aa12.18□□□□□ -0.46
NR1I3-234ENST00000515621 OVOS2A0A0J9YW53 1432 aa12.18□□□□□ -0.46
NR1I3-234ENST00000515621 OVOS2Q6IE36 1432 aa12.18□□□□□ -0.46
NR1I3-234ENST00000515621 STRCP1A6NGW2 1772 aa12.18□□□□□ -0.46
NR1I3-234ENST00000515621 TTC21BQ7Z4L5 1316 aa12.17□□□□□ -0.46
NR1I3-234ENST00000515621 ABCB7O75027 752 aa12.17□□□□□ -0.46
NR1I3-234ENST00000515621 NGEFQ8N5V2 710 aa12.17□□□□□ -0.46
NR1I3-234ENST00000515621 CFAP53Q96M91 514 aa12.17□□□□□ -0.46
NR1I3-234ENST00000515621 BLMP54132 1417 aaPredicted RBP12.17□□□□□ -0.46
NR1I3-234ENST00000515621 MST1RQ04912 1400 aa12.17□□□□□ -0.46
NR1I3-234ENST00000515621 MSH6P52701 1360 aa12.17□□□□□ -0.46
NR1I3-234ENST00000515621 ZBED9Q6R2W3 1325 aa12.16□□□□□ -0.46
NR1I3-234ENST00000515621 C1orf167Q5SNV9 1468 aa12.16□□□□□ -0.46
NR1I3-234ENST00000515621 CADPS2Q86UW7 1296 aa12.16□□□□□ -0.46
NR1I3-234ENST00000515621 PROM2Q8N271 834 aa12.16□□□□□ -0.46
NR1I3-234ENST00000515621 PNPLA6Q8IY17 1366 aa12.16□□□□□ -0.46
NR1I3-234ENST00000515621 PHF8Q9UPP1 1060 aa12.15□□□□□ -0.46
NR1I3-234ENST00000515621 KIF24Q5T7B8 1368 aa12.15□□□□□ -0.46
NR1I3-234ENST00000515621 CDK12Q9NYV4 1490 aaPredicted RBP12.14□□□□□ -0.47
NR1I3-234ENST00000515621 WDR43Q15061 677 aaKnown RBP eCLIP12.14□□□□□ -0.47
NR1I3-234ENST00000515621 C14orf37Q86TY3 774 aa12.14□□□□□ -0.47
NR1I3-234ENST00000515621 FAM9BQ8IZU0 186 aa12.14□□□□□ -0.47
NR1I3-234ENST00000515621 NGDNQ8NEJ9 315 aaKnown RBP12.14□□□□□ -0.47
NR1I3-234ENST00000515621 COG3Q96JB2 828 aa12.14□□□□□ -0.47
NR1I3-234ENST00000515621 YTHDC1Q96MU7 727 aaKnown RBP12.14□□□□□ -0.47
NR1I3-234ENST00000515621 ATF3P18847 181 aa12.13□□□□□ -0.47
NR1I3-234ENST00000515621 GGNBP2Q9H3C7 697 aa12.13□□□□□ -0.47
NR1I3-234ENST00000515621 HNRNPUQ00839 825 aaKnown RBP eCLIP12.12□□□□□ -0.47
NR1I3-234ENST00000515621 COL3A1P02461 1466 aaPredicted RBP12.12□□□□□ -0.47
NR1I3-234ENST00000515621 RGPD8O14715 1765 aaPredicted RBP12.12□□□□□ -0.47
NR1I3-234ENST00000515621 PIK3C2AO00443 1686 aa12.11□□□□□ -0.47
NR1I3-234ENST00000515621 SHPRHQ149N8 1683 aa12.11□□□□□ -0.47
NR1I3-234ENST00000515621 VASPP50552 380 aaPredicted RBP12.11□□□□□ -0.47
NR1I3-234ENST00000515621 CNGB1Q14028 1251 aaPredicted RBP12.11□□□□□ -0.47
NR1I3-234ENST00000515621 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.11□□□□□ -0.47
NR1I3-234ENST00000515621 XIRP1Q702N8 1843 aaKnown RBP12.1□□□□□ -0.47
NR1I3-234ENST00000515621 MTHFSP49914 203 aa12.1□□□□□ -0.47
NR1I3-234ENST00000515621 NME9Q86XW9 330 aa12.1□□□□□ -0.47
NR1I3-234ENST00000515621 NUDCQ9Y266 331 aa12.1□□□□□ -0.47
NR1I3-234ENST00000515621 SBNO1A3KN83 1393 aa12.09□□□□□ -0.47
NR1I3-234ENST00000515621 ESCO1Q5FWF5 840 aa12.09□□□□□ -0.47
NR1I3-234ENST00000515621 PMFBP1Q8TBY8 1022 aa12.09□□□□□ -0.47
NR1I3-234ENST00000515621 ZNF335Q9H4Z2 1342 aaPredicted RBP12.09□□□□□ -0.47
NR1I3-234ENST00000515621 RTL1A6NKG5 1358 aa12.08□□□□□ -0.48
NR1I3-234ENST00000515621 NUTM2FA1L443 756 aa12.08□□□□□ -0.48
NR1I3-234ENST00000515621 POLKQ9UBT6 870 aa12.08□□□□□ -0.48
NR1I3-234ENST00000515621 TRPM3Q9HCF6 1732 aaPredicted RBP12.08□□□□□ -0.48
NR1I3-234ENST00000515621 NPHP3Q7Z494 1330 aa12.08□□□□□ -0.48
NR1I3-234ENST00000515621 PHRF1Q9P1Y6 1649 aaKnown RBP12.08□□□□□ -0.48
NR1I3-234ENST00000515621 PDE3BQ13370 1112 aa12.07□□□□□ -0.48
NR1I3-234ENST00000515621 PNNQ9H307 717 aaKnown RBP12.07□□□□□ -0.48
NR1I3-234ENST00000515621 SLIT3O75094 1523 aa12.06□□□□□ -0.48
NR1I3-234ENST00000515621 PSME1Q06323 249 aa12.06□□□□□ -0.48
NR1I3-234ENST00000515621 ADAMTS8Q9UP79 889 aa12.06□□□□□ -0.48
NR1I3-234ENST00000515621 MED1Q15648 1581 aaPredicted RBP12.05□□□□□ -0.48
NR1I3-234ENST00000515621 LTBP4Q8N2S1 1624 aa12.05□□□□□ -0.48
NR1I3-234ENST00000515621 KCNH5Q8NCM2 988 aa12.05□□□□□ -0.48
NR1I3-234ENST00000515621 MARF1Q9Y4F3 1742 aaKnown RBP12.05□□□□□ -0.48
NR1I3-234ENST00000515621 ABCC6O95255 1503 aa12.05□□□□□ -0.48
NR1I3-234ENST00000515621 USP19O94966 1318 aa12.05□□□□□ -0.48
NR1I3-234ENST00000515621 FLT4P35916 1363 aa12.05□□□□□ -0.48
NR1I3-234ENST00000515621 ALS2Q96Q42 1657 aa12.04□□□□□ -0.48
NR1I3-234ENST00000515621 DIAPH1O60610 1272 aaKnown RBP12.04□□□□□ -0.48
NR1I3-234ENST00000515621 TNNT2P45379 298 aaPredicted RBP12.04□□□□□ -0.48
NR1I3-234ENST00000515621 ARHGEF10O15013 1369 aa12.04□□□□□ -0.48
NR1I3-234ENST00000515621 IQSEC2Q5JU85 1478 aa12.03□□□□□ -0.48
NR1I3-234ENST00000515621 PXDNQ92626 1479 aa12.03□□□□□ -0.48
NR1I3-234ENST00000515621 NFAT5O94916 1531 aa12.03□□□□□ -0.48
NR1I3-234ENST00000515621 NLRP6P59044 892 aa12.03□□□□□ -0.48
NR1I3-234ENST00000515621 RBM33Q96EV2 1170 aaKnown RBP12.03□□□□□ -0.48
NR1I3-234ENST00000515621 ORAI2Q96SN7 254 aa12.03□□□□□ -0.48
NR1I3-234ENST00000515621 ABTB2Q8N961 1025 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms