RNA–Protein interactions for RNA: ENST00000515509.1

CXXC4-203, Transcript of CXXC finger protein 4, humanhuman

TSL 2

Gene CXXC4, Length 363 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-203ENST00000515509 MPNDQ8N594 471 aa8.21□□□□□ -1.1
CXXC4-203ENST00000515509 CTHP32929 405 aa8.2□□□□□ -1.1
CXXC4-203ENST00000515509 GJA5P36382 358 aa8.2□□□□□ -1.1
CXXC4-203ENST00000515509 DIXDC1Q155Q3 683 aa8.2□□□□□ -1.1
CXXC4-203ENST00000515509 NPAS3Q8IXF0 933 aa8.2□□□□□ -1.1
CXXC4-203ENST00000515509 ZFP42Q96MM3 310 aa8.2□□□□□ -1.1
CXXC4-203ENST00000515509 TBC1D2Q9BYX2 928 aa8.2□□□□□ -1.1
CXXC4-203ENST00000515509 VEGFBP49765 207 aa8.19□□□□□ -1.1
CXXC4-203ENST00000515509 RSBN1LQ6PCB5 846 aaPredicted RBP8.19□□□□□ -1.1
CXXC4-203ENST00000515509 ZC3H15Q8WU90 426 aaKnown RBP8.19□□□□□ -1.1
CXXC4-203ENST00000515509 IRF7Q92985 503 aa8.19□□□□□ -1.1
CXXC4-203ENST00000515509 GMPRP36959 345 aa8.18□□□□□ -1.1
CXXC4-203ENST00000515509 LYPD8Q6UX82 237 aa8.18□□□□□ -1.1
CXXC4-203ENST00000515509 H3BM21 787 aa8.17□□□□□ -1.1
CXXC4-203ENST00000515509 ADH1CP00326 375 aa8.17□□□□□ -1.1
CXXC4-203ENST00000515509 TIMP2P16035 220 aa8.17□□□□□ -1.1
CXXC4-203ENST00000515509 WDR4P57081 412 aaKnown RBP8.17□□□□□ -1.1
CXXC4-203ENST00000515509 MRPL14Q6P1L8 145 aaKnown RBP8.17□□□□□ -1.1
CXXC4-203ENST00000515509 PARP9Q8IXQ6 854 aa8.17□□□□□ -1.1
CXXC4-203ENST00000515509 FAM174AQ8TBP5 190 aa8.17□□□□□ -1.1
CXXC4-203ENST00000515509 PCDHB15Q9Y5E8 787 aa8.17□□□□□ -1.1
CXXC4-203ENST00000515509 FAM181BA6NEQ2 426 aa8.16□□□□□ -1.1
CXXC4-203ENST00000515509 CFAP99D6REC4 459 aa8.16□□□□□ -1.1
CXXC4-203ENST00000515509 SCARF1Q14162 830 aa8.16□□□□□ -1.1
CXXC4-203ENST00000515509 ZBTB3Q9H5J0 574 aa8.16□□□□□ -1.1
CXXC4-203ENST00000515509 MAP10Q9P2G4 905 aa8.16□□□□□ -1.1
CXXC4-203ENST00000515509 SPTLC1O15269 473 aa8.15□□□□□ -1.1
CXXC4-203ENST00000515509 F12P00748 615 aaPredicted RBP8.15□□□□□ -1.1
CXXC4-203ENST00000515509 HRCP23327 699 aa8.15□□□□□ -1.1
CXXC4-203ENST00000515509 FOXJ1Q92949 421 aa8.15□□□□□ -1.1
CXXC4-203ENST00000515509 PURBQ96QR8 312 aaKnown RBP8.15□□□□□ -1.1
CXXC4-203ENST00000515509 ZSCAN1Q8NBB4 408 aa8.14□□□□□ -1.11
CXXC4-203ENST00000515509 ERBB4Q15303 1308 aa8.13□□□□□ -1.11
CXXC4-203ENST00000515509 ARID5BQ14865 1188 aa8.13□□□□□ -1.11
CXXC4-203ENST00000515509 PRPF38BQ5VTL8 546 aaKnown RBP8.13□□□□□ -1.11
CXXC4-203ENST00000515509 RIC3Q7Z5B4 369 aa8.13□□□□□ -1.11
CXXC4-203ENST00000515509 CDK15Q96Q40 435 aa8.13□□□□□ -1.11
CXXC4-203ENST00000515509 KLF16Q9BXK1 252 aaPredicted RBP8.13□□□□□ -1.11
CXXC4-203ENST00000515509 TRIM66O15016 1216 aa8.12□□□□□ -1.11
CXXC4-203ENST00000515509 LORP23490 312 aaPredicted RBP8.12□□□□□ -1.11
CXXC4-203ENST00000515509 CSPP1Q1MSJ5 1256 aa8.12□□□□□ -1.11
CXXC4-203ENST00000515509 CABLES1Q8TDN4 633 aa8.12□□□□□ -1.11
CXXC4-203ENST00000515509 SOBPA7XYQ1 873 aa8.11□□□□□ -1.11
CXXC4-203ENST00000515509 ZIC2O95409 532 aaPredicted RBP8.11□□□□□ -1.11
CXXC4-203ENST00000515509 AGERQ15109 404 aa8.11□□□□□ -1.11
CXXC4-203ENST00000515509 AK7Q96M32 723 aa8.11□□□□□ -1.11
CXXC4-203ENST00000515509 NR5A1Q13285 461 aa8.1□□□□□ -1.11
CXXC4-203ENST00000515509 ZFAND3Q9H8U3 227 aa8.1□□□□□ -1.11
CXXC4-203ENST00000515509 PER1O15534 1290 aaPredicted RBP8.09□□□□□ -1.11
CXXC4-203ENST00000515509 NR3C2P08235 984 aa8.09□□□□□ -1.11
CXXC4-203ENST00000515509 C4orf48Q5BLP8 95 aa8.09□□□□□ -1.11
CXXC4-203ENST00000515509 BPHLQ86WA6 291 aaPredicted RBP8.09□□□□□ -1.11
CXXC4-203ENST00000515509 TSC1Q92574 1164 aa8.09□□□□□ -1.11
CXXC4-203ENST00000515509 ITPKCQ96DU7 683 aa8.09□□□□□ -1.11
CXXC4-203ENST00000515509 C6orf118Q5T5N4 469 aa8.08□□□□□ -1.12
CXXC4-203ENST00000515509 NUTM2BA6NNL0 878 aaPredicted RBP8.07□□□□□ -1.12
CXXC4-203ENST00000515509 NUTM2EB1AL46 878 aaPredicted RBP8.07□□□□□ -1.12
CXXC4-203ENST00000515509 NUTM2DQ5VT03 806 aaPredicted RBP8.07□□□□□ -1.12
CXXC4-203ENST00000515509 NUTM2AQ8IVF1 878 aaPredicted RBP8.07□□□□□ -1.12
CXXC4-203ENST00000515509 LIMD1Q9UGP4 676 aa8.07□□□□□ -1.12
CXXC4-203ENST00000515509 MAN1A2O60476 641 aa8.06□□□□□ -1.12
CXXC4-203ENST00000515509 VSIG8P0DPA2 414 aa8.06□□□□□ -1.12
CXXC4-203ENST00000515509 GRM5P41594 1212 aa8.06□□□□□ -1.12
CXXC4-203ENST00000515509 QPCTQ16769 361 aa8.06□□□□□ -1.12
CXXC4-203ENST00000515509 MYSM1Q5VVJ2 828 aa8.06□□□□□ -1.12
CXXC4-203ENST00000515509 ARMC2Q8NEN0 867 aa8.06□□□□□ -1.12
CXXC4-203ENST00000515509 UPP2O95045 317 aa8.05□□□□□ -1.12
CXXC4-203ENST00000515509 TUSC1Q2TAM9 212 aa8.05□□□□□ -1.12
CXXC4-203ENST00000515509 LILRB3O75022 631 aa8.04□□□□□ -1.12
CXXC4-203ENST00000515509 BMP2P12643 396 aa8.04□□□□□ -1.12
CXXC4-203ENST00000515509 NBPF14Q5TI25 921 aa8.04□□□□□ -1.12
CXXC4-203ENST00000515509 LINC00528Q8N1L1 170 aa8.04□□□□□ -1.12
CXXC4-203ENST00000515509 MEIOBQ8N635 442 aa8.04□□□□□ -1.12
CXXC4-203ENST00000515509 C1QTNF2Q9BXJ5 285 aa8.04□□□□□ -1.12
CXXC4-203ENST00000515509 FSHRP23945 695 aa8.03□□□□□ -1.12
CXXC4-203ENST00000515509 PDE4DQ08499 809 aa8.03□□□□□ -1.12
CXXC4-203ENST00000515509 SH3RF1Q7Z6J0 888 aa8.03□□□□□ -1.12
CXXC4-203ENST00000515509 HELBQ8NG08 1087 aaPredicted RBP8.03□□□□□ -1.12
CXXC4-203ENST00000515509 VASH1Q7L8A9 365 aaPredicted RBP8.02□□□□□ -1.13
CXXC4-203ENST00000515509 MAP4K5Q9Y4K4 846 aa8.02□□□□□ -1.13
CXXC4-203ENST00000515509 MAGEB6P1A0A0J9YX57 407 aa8.01□□□□□ -1.13
CXXC4-203ENST00000515509 PPFIA3O75145 1194 aa8.01□□□□□ -1.13
CXXC4-203ENST00000515509 SH3BP5LQ7L8J4 393 aa8.01□□□□□ -1.13
CXXC4-203ENST00000515509 TRMT44Q8IYL2 757 aaKnown RBP8.01□□□□□ -1.13
CXXC4-203ENST00000515509 SLC24A3Q9HC58 644 aa8.01□□□□□ -1.13
CXXC4-203ENST00000515509 RTL5Q5HYW3 569 aaPredicted RBP8□□□□□ -1.13
CXXC4-203ENST00000515509 SOS2Q07890 1332 aaPredicted RBP8□□□□□ -1.13
CXXC4-203ENST00000515509 CLK2P49760 499 aaKnown RBP7.99□□□□□ -1.13
CXXC4-203ENST00000515509 CCDC116Q8IYX3 515 aa7.99□□□□□ -1.13
CXXC4-203ENST00000515509 TSEN34Q9BSV6 310 aaKnown RBP7.99□□□□□ -1.13
CXXC4-203ENST00000515509 CARD14Q9BXL6 1004 aa7.99□□□□□ -1.13
CXXC4-203ENST00000515509 DNMT3LQ9UJW3 386 aa7.99□□□□□ -1.13
CXXC4-203ENST00000515509 EMILIN1Q9Y6C2 1016 aa7.99□□□□□ -1.13
CXXC4-203ENST00000515509 ERFEQ4G0M1 354 aa7.97□□□□□ -1.13
CXXC4-203ENST00000515509 GPKOWQ92917 476 aaPredicted RBP eCLIP7.97□□□□□ -1.13
CXXC4-203ENST00000515509 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.95□□□□□ -1.14
CXXC4-203ENST00000515509 RSPH6AQ9H0K4 717 aa7.95□□□□□ -1.14
CXXC4-203ENST00000515509 POLR3EQ9NVU0 708 aa7.95□□□□□ -1.14
CXXC4-203ENST00000515509 TTLL8A6PVC2 850 aa7.94□□□□□ -1.14
CXXC4-203ENST00000515509 PPP1R26Q5T8A7 1209 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms