RNA–Protein interactions for RNA: ENST00000515143.5

SPOCK3-223, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, human

TSL 4

Gene SPOCK3, Length 565 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK3-223	ENST00000515143	NBPF8	Q3BBV2	869 aa		10.46	□□□□□ -0.73
SPOCK3-223	ENST00000515143	ALS2	Q96Q42	1657 aa		10.45	□□□□□ -0.74
SPOCK3-223	ENST00000515143	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.45	□□□□□ -0.74
SPOCK3-223	ENST00000515143	HOXD11	P31277	338 aa	Predicted RBP	10.45	□□□□□ -0.74
SPOCK3-223	ENST00000515143	NGDN	Q8NEJ9	315 aa	Known RBP	10.45	□□□□□ -0.74
SPOCK3-223	ENST00000515143	CABLES1	Q8TDN4	633 aa		10.45	□□□□□ -0.74
SPOCK3-223	ENST00000515143	SIN3A	Q96ST3	1273 aa		10.45	□□□□□ -0.74
SPOCK3-223	ENST00000515143	ATAD2	Q6PL18	1390 aa		10.44	□□□□□ -0.74
SPOCK3-223	ENST00000515143	ACE	P12821	1306 aa		10.43	□□□□□ -0.74
SPOCK3-223	ENST00000515143	NWD2	Q9ULI1	1742 aa		10.43	□□□□□ -0.74
SPOCK3-223	ENST00000515143	RALGAPB	Q86X10	1494 aa		10.42	□□□□□ -0.74
SPOCK3-223	ENST00000515143	SBNO2	Q9Y2G9	1366 aa		10.42	□□□□□ -0.74
SPOCK3-223	ENST00000515143	PUS7	Q96PZ0	661 aa	Known RBP	10.42	□□□□□ -0.74
SPOCK3-223	ENST00000515143	GLI3	P10071	1580 aa		10.41	□□□□□ -0.74
SPOCK3-223	ENST00000515143	POTED	Q86YR6	584 aa		10.41	□□□□□ -0.74
SPOCK3-223	ENST00000515143	SSH2	Q76I76	1423 aa		10.41	□□□□□ -0.74
SPOCK3-223	ENST00000515143	CPD	O75976	1380 aa		10.4	□□□□□ -0.74
SPOCK3-223	ENST00000515143	USP19	O94966	1318 aa		10.4	□□□□□ -0.74
SPOCK3-223	ENST00000515143	TRIM26	Q12899	539 aa	Predicted RBP	10.4	□□□□□ -0.74
SPOCK3-223	ENST00000515143	ZNF692	Q9BU19	519 aa	Predicted RBP	10.4	□□□□□ -0.74
SPOCK3-223	ENST00000515143	ITSN1	Q15811	1721 aa		10.4	□□□□□ -0.74
SPOCK3-223	ENST00000515143	TOPAZ1	Q8N9V7	1692 aa		10.4	□□□□□ -0.74
SPOCK3-223	ENST00000515143	SPATA31A5	Q5VU36	1347 aa		10.39	□□□□□ -0.75
SPOCK3-223	ENST00000515143	EVC2	Q86UK5	1308 aa		10.39	□□□□□ -0.75
SPOCK3-223	ENST00000515143	SPATA31A7	Q8IWB4	1347 aa		10.39	□□□□□ -0.75
SPOCK3-223	ENST00000515143	ABCA3	Q99758	1704 aa		10.39	□□□□□ -0.75
SPOCK3-223	ENST00000515143	CRYBG1	Q9Y4K1	1723 aa		10.39	□□□□□ -0.75
SPOCK3-223	ENST00000515143	LMOD2	Q6P5Q4	547 aa		10.39	□□□□□ -0.75
SPOCK3-223	ENST00000515143	SEPT12	Q8IYM1	358 aa		10.39	□□□□□ -0.75
SPOCK3-223	ENST00000515143	BTG4	Q9NY30	223 aa		10.39	□□□□□ -0.75
SPOCK3-223	ENST00000515143	TRPM1	Q7Z4N2	1603 aa		10.38	□□□□□ -0.75
SPOCK3-223	ENST00000515143	HAP1	P54257	671 aa	Predicted RBP	10.38	□□□□□ -0.75
SPOCK3-223	ENST00000515143	NLRP13	Q86W25	1043 aa		10.38	□□□□□ -0.75
SPOCK3-223	ENST00000515143	CABP1	Q9NZU7	370 aa		10.38	□□□□□ -0.75
SPOCK3-223	ENST00000515143	COL14A1	Q05707	1796 aa	Known RBP	10.38	□□□□□ -0.75
SPOCK3-223	ENST00000515143	SLC24A1	O60721	1099 aa		10.37	□□□□□ -0.75
SPOCK3-223	ENST00000515143	PAK3	O75914	559 aa	Predicted RBP	10.37	□□□□□ -0.75
SPOCK3-223	ENST00000515143	SRPK2	P78362	688 aa	Known RBP	10.37	□□□□□ -0.75
SPOCK3-223	ENST00000515143	NEUROD1	Q13562	356 aa		10.37	□□□□□ -0.75
SPOCK3-223	ENST00000515143	PPIP5K1	Q6PFW1	1433 aa		10.37	□□□□□ -0.75
SPOCK3-223	ENST00000515143	CABP2	Q9NPB3	220 aa		10.37	□□□□□ -0.75
SPOCK3-223	ENST00000515143	USP6	P35125	1406 aa		10.36	□□□□□ -0.75
SPOCK3-223	ENST00000515143	CPSF1	Q10570	1443 aa	Known RBP	10.36	□□□□□ -0.75
SPOCK3-223	ENST00000515143	GC	P02774	474 aa		10.36	□□□□□ -0.75
SPOCK3-223	ENST00000515143	BARGIN	Q6ZT62	677 aa		10.36	□□□□□ -0.75
SPOCK3-223	ENST00000515143	KRT27	Q7Z3Y8	459 aa		10.36	□□□□□ -0.75
SPOCK3-223	ENST00000515143	ABTB2	Q8N961	1025 aa		10.36	□□□□□ -0.75
SPOCK3-223	ENST00000515143	PRDM11	Q9NQV5	511 aa		10.36	□□□□□ -0.75
SPOCK3-223	ENST00000515143	ROCK2	O75116	1388 aa	Known RBP	10.36	□□□□□ -0.75
SPOCK3-223	ENST00000515143	KIAA0232	Q92628	1395 aa		10.36	□□□□□ -0.75
SPOCK3-223	ENST00000515143	SPATA31A1	Q5TZJ5	1347 aa		10.35	□□□□□ -0.75
SPOCK3-223	ENST00000515143	PLCH1	Q4KWH8	1693 aa		10.35	□□□□□ -0.75
SPOCK3-223	ENST00000515143	BLM	P54132	1417 aa	Predicted RBP	10.35	□□□□□ -0.75
SPOCK3-223	ENST00000515143	TIMELESS	Q9UNS1	1208 aa		10.35	□□□□□ -0.75
SPOCK3-223	ENST00000515143	NRAP	Q86VF7	1730 aa		10.35	□□□□□ -0.75
SPOCK3-223	ENST00000515143	THRAP3	Q9Y2W1	955 aa	Known RBP	10.34	□□□□□ -0.75
SPOCK3-223	ENST00000515143	AATK	Q6ZMQ8	1374 aa		10.34	□□□□□ -0.75
SPOCK3-223	ENST00000515143	TTC21A	Q8NDW8	1320 aa		10.33	□□□□□ -0.76
SPOCK3-223	ENST00000515143	QRICH2	Q9H0J4	1663 aa		10.32	□□□□□ -0.76
SPOCK3-223	ENST00000515143	CAMTA1	Q9Y6Y1	1673 aa		10.32	□□□□□ -0.76
SPOCK3-223	ENST00000515143	ZC3H6	P61129	1189 aa	Known RBP	10.32	□□□□□ -0.76
SPOCK3-223	ENST00000515143	FAM98C	Q17RN3	349 aa	Known RBP	10.32	□□□□□ -0.76
SPOCK3-223	ENST00000515143	TTC21B	Q7Z4L5	1316 aa		10.32	□□□□□ -0.76
SPOCK3-223	ENST00000515143	CLSPN	Q9HAW4	1339 aa		10.32	□□□□□ -0.76
SPOCK3-223	ENST00000515143	USP31	Q70CQ4	1352 aa		10.31	□□□□□ -0.76
SPOCK3-223	ENST00000515143	C11orf95	C9JLR9	678 aa	Predicted RBP	10.31	□□□□□ -0.76
SPOCK3-223	ENST00000515143	NLRP6	P59044	892 aa		10.31	□□□□□ -0.76
SPOCK3-223	ENST00000515143	ARHGEF25	Q86VW2	580 aa		10.31	□□□□□ -0.76
SPOCK3-223	ENST00000515143	TESK2	Q96S53	571 aa		10.31	□□□□□ -0.76
SPOCK3-223	ENST00000515143	CARD11	Q9BXL7	1154 aa		10.31	□□□□□ -0.76
SPOCK3-223	ENST00000515143	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.31	□□□□□ -0.76
SPOCK3-223	ENST00000515143	SLIT3	O75094	1523 aa		10.31	□□□□□ -0.76
SPOCK3-223	ENST00000515143	LMO7	Q8WWI1	1683 aa		10.31	□□□□□ -0.76
SPOCK3-223	ENST00000515143	THSD7A	Q9UPZ6	1657 aa		10.31	□□□□□ -0.76
SPOCK3-223	ENST00000515143	BRWD3	Q6RI45	1802 aa		10.3	□□□□□ -0.76
SPOCK3-223	ENST00000515143	CHRNA2	Q15822	529 aa		10.3	□□□□□ -0.76
SPOCK3-223	ENST00000515143	NUTM2G	Q5VZR2	741 aa		10.3	□□□□□ -0.76
SPOCK3-223	ENST00000515143	KCNH5	Q8NCM2	988 aa		10.3	□□□□□ -0.76
SPOCK3-223	ENST00000515143	CCDC9	Q9Y3X0	531 aa	Known RBP	10.3	□□□□□ -0.76
SPOCK3-223	ENST00000515143	DISP2	A7MBM2	1401 aa		10.3	□□□□□ -0.76
SPOCK3-223	ENST00000515143	TONSL	Q96HA7	1378 aa		10.29	□□□□□ -0.76
SPOCK3-223	ENST00000515143	FAM196A	Q6ZSG2	479 aa		10.29	□□□□□ -0.76
SPOCK3-223	ENST00000515143	TCP11L2	Q8N4U5	519 aa		10.29	□□□□□ -0.76
SPOCK3-223	ENST00000515143	ZRANB1	Q9UGI0	708 aa		10.29	□□□□□ -0.76
SPOCK3-223	ENST00000515143	NRK	Q7Z2Y5	1582 aa		10.29	□□□□□ -0.76
SPOCK3-223	ENST00000515143	CD163L1	Q9NR16	1453 aa		10.29	□□□□□ -0.76
SPOCK3-223	ENST00000515143	EVA1C	P58658	441 aa		10.28	□□□□□ -0.76
SPOCK3-223	ENST00000515143	LARP1	Q6PKG0	1096 aa	Known RBP	10.28	□□□□□ -0.76
SPOCK3-223	ENST00000515143	NINL	Q9Y2I6	1382 aa		10.27	□□□□□ -0.76
SPOCK3-223	ENST00000515143	COL18A1	P39060	1754 aa		10.27	□□□□□ -0.77
SPOCK3-223	ENST00000515143	PLEKHG5	O94827	1062 aa		10.27	□□□□□ -0.77
SPOCK3-223	ENST00000515143	AXIN2	Q9Y2T1	843 aa		10.27	□□□□□ -0.77
SPOCK3-223	ENST00000515143	COL5A2	P05997	1499 aa	Predicted RBP	10.27	□□□□□ -0.77
SPOCK3-223	ENST00000515143	KTN1	Q86UP2	1357 aa	Known RBP	10.26	□□□□□ -0.77
SPOCK3-223	ENST00000515143	BCL9	O00512	1426 aa		10.26	□□□□□ -0.77
SPOCK3-223	ENST00000515143	SF3B2	Q13435	895 aa	Known RBP	10.26	□□□□□ -0.77
SPOCK3-223	ENST00000515143	DEFB132	Q7Z7B7	95 aa		10.26	□□□□□ -0.77
SPOCK3-223	ENST00000515143	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.26	□□□□□ -0.77
SPOCK3-223	ENST00000515143	SLC12A5	Q9H2X9	1139 aa		10.26	□□□□□ -0.77
SPOCK3-223	ENST00000515143	ABCC6	O95255	1503 aa		10.26	□□□□□ -0.77

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