RNA–Protein interactions for RNA: ENST00000514967.5

PROM1-218, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-218ENST00000514967 TNS3Q68CZ2 1445 aa22.38■■□□□ 1.17
PROM1-218ENST00000514967 NRKQ7Z2Y5 1582 aa22.38■■□□□ 1.17
PROM1-218ENST00000514967 ARHGEF10O15013 1369 aa22.38■■□□□ 1.17
PROM1-218ENST00000514967 TTC21BQ7Z4L5 1316 aa22.36■■□□□ 1.17
PROM1-218ENST00000514967 HSPA1LP34931 641 aa22.36■■□□□ 1.17
PROM1-218ENST00000514967 DDX17Q92841 729 aaKnown RBP22.36■■□□□ 1.17
PROM1-218ENST00000514967 ALS2Q96Q42 1657 aa22.36■■□□□ 1.17
PROM1-218ENST00000514967 CARD14Q9BXL6 1004 aa22.34■■□□□ 1.17
PROM1-218ENST00000514967 PANK3Q9H999 370 aa22.34■■□□□ 1.17
PROM1-218ENST00000514967 USP31Q70CQ4 1352 aa22.34■■□□□ 1.17
PROM1-218ENST00000514967 JCADQ9P266 1359 aa22.34■■□□□ 1.17
PROM1-218ENST00000514967 POLR3GLQ9BT43 218 aa22.33■■□□□ 1.17
PROM1-218ENST00000514967 COL22A1Q8NFW1 1626 aaPredicted RBP22.32■■□□□ 1.16
PROM1-218ENST00000514967 PER1O15534 1290 aaPredicted RBP22.32■■□□□ 1.16
PROM1-218ENST00000514967 SHPRHQ149N8 1683 aa22.31■■□□□ 1.16
PROM1-218ENST00000514967 USP54Q70EL1 1684 aa22.31■■□□□ 1.16
PROM1-218ENST00000514967 MED1Q15648 1581 aaPredicted RBP22.31■■□□□ 1.16
PROM1-218ENST00000514967 PNPLA6Q8IY17 1366 aa22.31■■□□□ 1.16
PROM1-218ENST00000514967 NPC1L1Q9UHC9 1359 aa22.3■■□□□ 1.16
PROM1-218ENST00000514967 XPCQ01831 940 aaPredicted RBP22.3■■□□□ 1.16
PROM1-218ENST00000514967 NSD3Q9BZ95 1437 aa22.29■■□□□ 1.16
PROM1-218ENST00000514967 SPATA31A6Q5VVP1 1343 aa22.29■■□□□ 1.16
PROM1-218ENST00000514967 NSD2O96028 1365 aa22.28■■□□□ 1.16
PROM1-218ENST00000514967 NLRP13Q86W25 1043 aa22.28■■□□□ 1.16
PROM1-218ENST00000514967 USP19O94966 1318 aa22.28■■□□□ 1.16
PROM1-218ENST00000514967 CGNL1Q0VF96 1302 aa22.28■■□□□ 1.16
PROM1-218ENST00000514967 PAK3O75914 559 aaPredicted RBP22.27■■□□□ 1.16
PROM1-218ENST00000514967 ABTB2Q8N961 1025 aa22.27■■□□□ 1.16
PROM1-218ENST00000514967 FYB1O15117 783 aa22.26■■□□□ 1.15
PROM1-218ENST00000514967 KNSTRNQ9Y448 316 aa22.26■■□□□ 1.15
PROM1-218ENST00000514967 PIK3C2AO00443 1686 aa22.26■■□□□ 1.15
PROM1-218ENST00000514967 OVOS2A0A0J9YW53 1432 aa22.24■■□□□ 1.15
PROM1-218ENST00000514967 OVOS2Q6IE36 1432 aa22.24■■□□□ 1.15
PROM1-218ENST00000514967 AMER1Q5JTC6 1135 aaPredicted RBP22.23■■□□□ 1.15
PROM1-218ENST00000514967 SLIT3O75094 1523 aa22.22■■□□□ 1.15
PROM1-218ENST00000514967 NLRP6P59044 892 aa22.22■■□□□ 1.15
PROM1-218ENST00000514967 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.22■■□□□ 1.15
PROM1-218ENST00000514967 CRYBG1Q9Y4K1 1723 aa22.21■■□□□ 1.15
PROM1-218ENST00000514967 ILDR1Q86SU0 546 aaPredicted RBP22.21■■□□□ 1.15
PROM1-218ENST00000514967 NME9Q86XW9 330 aa22.21■■□□□ 1.15
PROM1-218ENST00000514967 KCNH5Q8NCM2 988 aa22.21■■□□□ 1.15
PROM1-218ENST00000514967 COG3Q96JB2 828 aa22.19■■□□□ 1.14
PROM1-218ENST00000514967 KIF20BQ96Q89 1820 aa22.19■■□□□ 1.14
PROM1-218ENST00000514967 MARF1Q9Y4F3 1742 aaKnown RBP22.18■■□□□ 1.14
PROM1-218ENST00000514967 DDX10Q13206 875 aaKnown RBP22.18■■□□□ 1.14
PROM1-218ENST00000514967 LMOD2Q6P5Q4 547 aa22.18■■□□□ 1.14
PROM1-218ENST00000514967 GCP02774 474 aa22.17■■□□□ 1.14
PROM1-218ENST00000514967 CPDO75976 1380 aa22.16■■□□□ 1.14
PROM1-218ENST00000514967 ANKRD26Q9UPS8 1709 aa22.16■■□□□ 1.14
PROM1-218ENST00000514967 ABCA3Q99758 1704 aa22.15■■□□□ 1.14
PROM1-218ENST00000514967 PHRF1Q9P1Y6 1649 aaKnown RBP22.15■■□□□ 1.14
PROM1-218ENST00000514967 AATKQ6ZMQ8 1374 aa22.14■■□□□ 1.14
PROM1-218ENST00000514967 GGNBP2Q9H3C7 697 aa22.14■■□□□ 1.13
PROM1-218ENST00000514967 NFAT5O94916 1531 aa22.13■■□□□ 1.13
PROM1-218ENST00000514967 ABCC6O95255 1503 aa22.12■■□□□ 1.13
PROM1-218ENST00000514967 ZRANB1Q9UGI0 708 aa22.12■■□□□ 1.13
PROM1-218ENST00000514967 KIF24Q5T7B8 1368 aa22.12■■□□□ 1.13
PROM1-218ENST00000514967 NUTM2GQ5VZR2 741 aa22.11■■□□□ 1.13
PROM1-218ENST00000514967 ARHGEF25Q86VW2 580 aa22.09■■□□□ 1.13
PROM1-218ENST00000514967 CABLES1Q8TDN4 633 aa22.09■■□□□ 1.13
PROM1-218ENST00000514967 LRP6O75581 1613 aa22.08■■□□□ 1.13
PROM1-218ENST00000514967 HAP1P54257 671 aaPredicted RBP22.07■■□□□ 1.12
PROM1-218ENST00000514967 MORC1Q86VD1 984 aa22.07■■□□□ 1.12
PROM1-218ENST00000514967 PARD3Q8TEW0 1356 aa22.05■■□□□ 1.12
PROM1-218ENST00000514967 RALBP1Q15311 655 aa22.05■■□□□ 1.12
PROM1-218ENST00000514967 RTL1A6NKG5 1358 aa22.04■■□□□ 1.12
PROM1-218ENST00000514967 KIAA0232Q92628 1395 aa22.04■■□□□ 1.12
PROM1-218ENST00000514967 FNBP4Q8N3X1 1017 aaPredicted RBP22.04■■□□□ 1.12
PROM1-218ENST00000514967 SMG6Q86US8 1419 aaKnown RBP22.04■■□□□ 1.12
PROM1-218ENST00000514967 COL14A1Q05707 1796 aaKnown RBP22.03■■□□□ 1.12
PROM1-218ENST00000514967 SLIT2O94813 1529 aa22.02■■□□□ 1.12
PROM1-218ENST00000514967 FAM83GA6ND36 823 aa22.02■■□□□ 1.12
PROM1-218ENST00000514967 NUTM2BA6NNL0 878 aaPredicted RBP22.02■■□□□ 1.12
PROM1-218ENST00000514967 NUTM2EB1AL46 878 aaPredicted RBP22.02■■□□□ 1.12
PROM1-218ENST00000514967 CC2D1BQ5T0F9 858 aaKnown RBP22.02■■□□□ 1.12
PROM1-218ENST00000514967 NUTM2AQ8IVF1 878 aaPredicted RBP22.02■■□□□ 1.12
PROM1-218ENST00000514967 PRDM11Q9NQV5 511 aa22.02■■□□□ 1.12
PROM1-218ENST00000514967 ZC3H6P61129 1189 aaKnown RBP22.01■■□□□ 1.11
PROM1-218ENST00000514967 MAP3K19Q56UN5 1328 aa22.01■■□□□ 1.11
PROM1-218ENST00000514967 LMO7Q8WWI1 1683 aa22.01■■□□□ 1.11
PROM1-218ENST00000514967 COL18A1P39060 1754 aa22■■□□□ 1.11
PROM1-218ENST00000514967 BLMP54132 1417 aaPredicted RBP22■■□□□ 1.11
PROM1-218ENST00000514967 IP6K1Q92551 441 aa22■■□□□ 1.11
PROM1-218ENST00000514967 POLKQ9UBT6 870 aa22■■□□□ 1.11
PROM1-218ENST00000514967 NWD2Q9ULI1 1742 aa22■■□□□ 1.11
PROM1-218ENST00000514967 INSRP06213 1382 aa21.99■■□□□ 1.11
PROM1-218ENST00000514967 ADAMTS2O95450 1211 aa21.98■■□□□ 1.11
PROM1-218ENST00000514967 FLT4P35916 1363 aa21.98■■□□□ 1.11
PROM1-218ENST00000514967 PRKRIP1Q9H875 184 aaPredicted RBP21.97■■□□□ 1.11
PROM1-218ENST00000514967 LTN1O94822 1766 aa21.97■■□□□ 1.11
PROM1-218ENST00000514967 MAP2P11137 1827 aaKnown RBP21.96■■□□□ 1.11
PROM1-218ENST00000514967 MEX3CQ5U5Q3 659 aaKnown RBP21.96■■□□□ 1.11
PROM1-218ENST00000514967 NGLY1Q96IV0 654 aa21.96■■□□□ 1.11
PROM1-218ENST00000514967 HOXC9P31274 260 aa21.95■■□□□ 1.1
PROM1-218ENST00000514967 CDK12Q9NYV4 1490 aaPredicted RBP21.95■■□□□ 1.1
PROM1-218ENST00000514967 CAMTA1Q9Y6Y1 1673 aa21.95■■□□□ 1.1
PROM1-218ENST00000514967 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.94■■□□□ 1.1
PROM1-218ENST00000514967 AMPHP49418 695 aa21.94■■□□□ 1.1
PROM1-218ENST00000514967 RRS1Q15050 365 aaKnown RBP21.94■■□□□ 1.1
PROM1-218ENST00000514967 BCL9LQ86UU0 1499 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms