RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 PLEKHH1Q9ULM0 1364 aa9.56□□□□□ -0.88
PDLIM5-219ENST00000514743 TMEM131LA2VDJ0 1609 aa9.56□□□□□ -0.88
PDLIM5-219ENST00000514743 ARHGAP31Q2M1Z3 1444 aa9.56□□□□□ -0.88
PDLIM5-219ENST00000514743 YEATS2Q9ULM3 1422 aa9.56□□□□□ -0.88
PDLIM5-219ENST00000514743 GGT6Q6P531 493 aa9.55□□□□□ -0.88
PDLIM5-219ENST00000514743 RCAN3Q9UKA8 241 aa9.55□□□□□ -0.88
PDLIM5-219ENST00000514743 CARD14Q9BXL6 1004 aa9.55□□□□□ -0.88
PDLIM5-219ENST00000514743 TULP4Q9NRJ4 1543 aa9.55□□□□□ -0.88
PDLIM5-219ENST00000514743 DIP2BQ9P265 1576 aa9.55□□□□□ -0.88
PDLIM5-219ENST00000514743 DNTTIP2Q5QJE6 756 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-219ENST00000514743 C14orf93Q9H972 538 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-219ENST00000514743 ZNF521Q96K83 1311 aa9.55□□□□□ -0.88
PDLIM5-219ENST00000514743 RIMBP3CA6NJZ7 1639 aa9.54□□□□□ -0.88
PDLIM5-219ENST00000514743 RIMBP3BA6NNM3 1639 aa9.54□□□□□ -0.88
PDLIM5-219ENST00000514743 RIMBP3Q9UFD9 1639 aa9.54□□□□□ -0.88
PDLIM5-219ENST00000514743 SLC52A1Q9NWF4 448 aa9.54□□□□□ -0.88
PDLIM5-219ENST00000514743 VGFO15240 615 aaPredicted RBP9.54□□□□□ -0.88
PDLIM5-219ENST00000514743 TNNT2P45379 298 aaPredicted RBP9.54□□□□□ -0.88
PDLIM5-219ENST00000514743 PTMSP20962 102 aa9.53□□□□□ -0.88
PDLIM5-219ENST00000514743 TSPOAP1O95153 1857 aa9.53□□□□□ -0.88
PDLIM5-219ENST00000514743 RPGRIP1LQ68CZ1 1315 aa9.52□□□□□ -0.88
PDLIM5-219ENST00000514743 EXOC6Q8TAG9 804 aa9.52□□□□□ -0.88
PDLIM5-219ENST00000514743 ZNF622Q969S3 477 aaKnown RBP eCLIP9.52□□□□□ -0.88
PDLIM5-219ENST00000514743 TPM2P07951 284 aa9.52□□□□□ -0.89
PDLIM5-219ENST00000514743 ZNF526Q8TF50 670 aaPredicted RBP9.52□□□□□ -0.89
PDLIM5-219ENST00000514743 CLTCQ00610 1675 aaKnown RBP9.52□□□□□ -0.89
PDLIM5-219ENST00000514743 REREQ9P2R6 1566 aa9.51□□□□□ -0.89
PDLIM5-219ENST00000514743 CHGAP10645 457 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-219ENST00000514743 PSMD1Q99460 953 aa9.5□□□□□ -0.89
PDLIM5-219ENST00000514743 SETD1AO15047 1707 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-219ENST00000514743 ANKRD26Q9UPS8 1709 aa9.5□□□□□ -0.89
PDLIM5-219ENST00000514743 ZFYVE9O95405 1425 aa9.5□□□□□ -0.89
PDLIM5-219ENST00000514743 OS9Q13438 667 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-219ENST00000514743 TRAK1Q9UPV9 953 aa9.5□□□□□ -0.89
PDLIM5-219ENST00000514743 NSD3Q9BZ95 1437 aa9.5□□□□□ -0.89
PDLIM5-219ENST00000514743 CLCN1P35523 988 aa9.5□□□□□ -0.89
PDLIM5-219ENST00000514743 TMEM132EQ6IEE7 984 aa9.5□□□□□ -0.89
PDLIM5-219ENST00000514743 IFNLR1Q8IU57 520 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-219ENST00000514743 MCCP23508 829 aa9.49□□□□□ -0.89
PDLIM5-219ENST00000514743 DUSP27Q5VZP5 1158 aa9.49□□□□□ -0.89
PDLIM5-219ENST00000514743 AEBP1Q8IUX7 1158 aa9.49□□□□□ -0.89
PDLIM5-219ENST00000514743 KIF13AQ9H1H9 1805 aa9.49□□□□□ -0.89
PDLIM5-219ENST00000514743 WDR43Q15061 677 aaKnown RBP eCLIP9.49□□□□□ -0.89
PDLIM5-219ENST00000514743 POLR3AO14802 1390 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-219ENST00000514743 UTP14CQ5TAP6 766 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-219ENST00000514743 PTPRMP28827 1452 aa9.48□□□□□ -0.89
PDLIM5-219ENST00000514743 MMP14P50281 582 aa9.48□□□□□ -0.89
PDLIM5-219ENST00000514743 CERS3Q8IU89 383 aa9.48□□□□□ -0.89
PDLIM5-219ENST00000514743 IQSEC2Q5JU85 1478 aa9.48□□□□□ -0.89
PDLIM5-219ENST00000514743 PLIN1O60240 522 aa9.48□□□□□ -0.89
PDLIM5-219ENST00000514743 TRMT2AQ8IZ69 625 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-219ENST00000514743 IDI1Q13907 227 aa9.47□□□□□ -0.89
PDLIM5-219ENST00000514743 AXDND1Q5T1B0 1012 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-219ENST00000514743 DMTNQ08495 405 aa9.47□□□□□ -0.89
PDLIM5-219ENST00000514743 NUTM2DQ5VT03 806 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-219ENST00000514743 CCDC146Q8IYE0 955 aa9.46□□□□□ -0.89
PDLIM5-219ENST00000514743 SLC12A5Q9H2X9 1139 aa9.46□□□□□ -0.89
PDLIM5-219ENST00000514743 AGLP35573 1532 aa9.46□□□□□ -0.9
PDLIM5-219ENST00000514743 PUS7Q96PZ0 661 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-219ENST00000514743 SPINK5Q9NQ38 1064 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-219ENST00000514743 SLFN5Q08AF3 891 aa9.46□□□□□ -0.9
PDLIM5-219ENST00000514743 C20orf194Q5TEA3 1177 aa9.46□□□□□ -0.9
PDLIM5-219ENST00000514743 ALKQ9UM73 1620 aa9.46□□□□□ -0.9
PDLIM5-219ENST00000514743 NGEFQ8N5V2 710 aa9.45□□□□□ -0.9
PDLIM5-219ENST00000514743 MAP7D2Q96T17 732 aa9.45□□□□□ -0.9
PDLIM5-219ENST00000514743 KIF20BQ96Q89 1820 aa9.45□□□□□ -0.9
PDLIM5-219ENST00000514743 SKAP1Q86WV1 359 aa9.45□□□□□ -0.9
PDLIM5-219ENST00000514743 CRBNQ96SW2 442 aa9.45□□□□□ -0.9
PDLIM5-219ENST00000514743 ADGRB2O60241 1585 aa9.45□□□□□ -0.9
PDLIM5-219ENST00000514743 SPATA31D1Q6ZQQ2 1576 aa9.45□□□□□ -0.9
PDLIM5-219ENST00000514743 PHF14O94880 888 aa9.44□□□□□ -0.9
PDLIM5-219ENST00000514743 GOLGA2Q08379 1002 aa9.44□□□□□ -0.9
PDLIM5-219ENST00000514743 DMRT2Q9Y5R5 561 aa9.44□□□□□ -0.9
PDLIM5-219ENST00000514743 NKTRP30414 1462 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-219ENST00000514743 PSEN1P49768 467 aa9.44□□□□□ -0.9
PDLIM5-219ENST00000514743 ANKRD36BQ8N2N9 1353 aa9.44□□□□□ -0.9
PDLIM5-219ENST00000514743 CD163L1Q9NR16 1453 aa9.44□□□□□ -0.9
PDLIM5-219ENST00000514743 NRXN3Q9Y4C0 1643 aa9.44□□□□□ -0.9
PDLIM5-219ENST00000514743 APAF1O14727 1248 aa9.44□□□□□ -0.9
PDLIM5-219ENST00000514743 PRDM16Q9HAZ2 1276 aa9.44□□□□□ -0.9
PDLIM5-219ENST00000514743 CYB5RLQ6IPT4 315 aa9.43□□□□□ -0.9
PDLIM5-219ENST00000514743 NFKBIBQ15653 356 aa9.43□□□□□ -0.9
PDLIM5-219ENST00000514743 NLRP1Q9C000 1473 aa9.42□□□□□ -0.9
PDLIM5-219ENST00000514743 ARHGEF40Q8TER5 1519 aa9.42□□□□□ -0.9
PDLIM5-219ENST00000514743 YTHDC2Q9H6S0 1430 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-219ENST00000514743 EVC2Q86UK5 1308 aa9.42□□□□□ -0.9
PDLIM5-219ENST00000514743 KDM2BQ8NHM5 1336 aa9.42□□□□□ -0.9
PDLIM5-219ENST00000514743 COL3A1P02461 1466 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-219ENST00000514743 ARID3AQ99856 593 aa9.41□□□□□ -0.9
PDLIM5-219ENST00000514743 A0A1W2PP64 1363 aa9.41□□□□□ -0.9
PDLIM5-219ENST00000514743 FBXO31Q5XUX0 539 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-219ENST00000514743 NSD2O96028 1365 aa9.41□□□□□ -0.9
PDLIM5-219ENST00000514743 ABCC11Q96J66 1382 aa9.41□□□□□ -0.9
PDLIM5-219ENST00000514743 VIRMAQ69YN4 1812 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-219ENST00000514743 KIF20AO95235 890 aa9.4□□□□□ -0.9
PDLIM5-219ENST00000514743 VASPP50552 380 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-219ENST00000514743 MORC1Q86VD1 984 aa9.4□□□□□ -0.9
PDLIM5-219ENST00000514743 CABP2Q9NPB3 220 aa9.4□□□□□ -0.9
PDLIM5-219ENST00000514743 A2ML1A8K2U0 1454 aa9.4□□□□□ -0.9
PDLIM5-219ENST00000514743 FAM69CQ0P6D2 419 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms