RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 PCMTD1Q96MG8 357 aaPredicted RBP12.14□□□□□ -0.47
PDE4D-221ENST00000514231 CTDSPL2Q05D32 466 aa12.13□□□□□ -0.47
PDE4D-221ENST00000514231 TRAF7Q6Q0C0 670 aa12.13□□□□□ -0.47
PDE4D-221ENST00000514231 CYP4X1Q8N118 509 aa12.13□□□□□ -0.47
PDE4D-221ENST00000514231 BAP1Q92560 729 aa12.13□□□□□ -0.47
PDE4D-221ENST00000514231 MRGPRX2Q96LB1 330 aa12.13□□□□□ -0.47
PDE4D-221ENST00000514231 SH3BP2P78314 561 aa12.12□□□□□ -0.47
PDE4D-221ENST00000514231 PKDCCQ504Y2 493 aa12.12□□□□□ -0.47
PDE4D-221ENST00000514231 SNIP1Q8TAD8 396 aaKnown RBP12.12□□□□□ -0.47
PDE4D-221ENST00000514231 MAP10Q9P2G4 905 aa12.11□□□□□ -0.47
PDE4D-221ENST00000514231 TTC24A2A3L6 582 aaPredicted RBP12.09□□□□□ -0.47
PDE4D-221ENST00000514231 FAM187AA6NFU0 413 aa12.09□□□□□ -0.47
PDE4D-221ENST00000514231 ZNF511Q8NB15 262 aa12.09□□□□□ -0.47
PDE4D-221ENST00000514231 LCE2BO14633 110 aa12.08□□□□□ -0.48
PDE4D-221ENST00000514231 ARMC2Q8NEN0 867 aa12.07□□□□□ -0.48
PDE4D-221ENST00000514231 SIAH2O43255 324 aa12.06□□□□□ -0.48
PDE4D-221ENST00000514231 RFC5P40937 340 aa12.06□□□□□ -0.48
PDE4D-221ENST00000514231 LINC01559Q495D7 138 aa12.06□□□□□ -0.48
PDE4D-221ENST00000514231 EHBP1Q8NDI1 1231 aa12.06□□□□□ -0.48
PDE4D-221ENST00000514231 AP1G2O75843 785 aa12.05□□□□□ -0.48
PDE4D-221ENST00000514231 VARSP26640 1264 aaKnown RBP12.04□□□□□ -0.48
PDE4D-221ENST00000514231 MYT1Q01538 1121 aa12.04□□□□□ -0.48
PDE4D-221ENST00000514231 TMEM259Q4ZIN3 620 aa12.04□□□□□ -0.48
PDE4D-221ENST00000514231 AVPP01185 164 aa12.03□□□□□ -0.48
PDE4D-221ENST00000514231 LRRN4Q8WUT4 740 aa12.03□□□□□ -0.48
PDE4D-221ENST00000514231 SMPD1P17405 629 aa12.02□□□□□ -0.49
PDE4D-221ENST00000514231 J3QL48 77 aa12.01□□□□□ -0.49
PDE4D-221ENST00000514231 MPNDQ8N594 471 aa12□□□□□ -0.49
PDE4D-221ENST00000514231 NBPF14Q5TI25 921 aa11.99□□□□□ -0.49
PDE4D-221ENST00000514231 BPHLQ86WA6 291 aaPredicted RBP11.99□□□□□ -0.49
PDE4D-221ENST00000514231 GPKOWQ92917 476 aaPredicted RBP eCLIP11.99□□□□□ -0.49
PDE4D-221ENST00000514231 FOXJ1Q92949 421 aa11.99□□□□□ -0.49
PDE4D-221ENST00000514231 ALDH1A1P00352 501 aa11.98□□□□□ -0.49
PDE4D-221ENST00000514231 CRIPAKQ8N1N5 446 aa11.98□□□□□ -0.49
PDE4D-221ENST00000514231 USP17L8P0C7I0 530 aa11.97□□□□□ -0.49
PDE4D-221ENST00000514231 NR6A1Q15406 480 aa11.97□□□□□ -0.49
PDE4D-221ENST00000514231 CTC1Q2NKJ3 1217 aa11.97□□□□□ -0.49
PDE4D-221ENST00000514231 SMCPP49901 116 aaPredicted RBP11.96□□□□□ -0.49
PDE4D-221ENST00000514231 AGERQ15109 404 aa11.96□□□□□ -0.49
PDE4D-221ENST00000514231 FAM174AQ8TBP5 190 aa11.96□□□□□ -0.49
PDE4D-221ENST00000514231 AAASQ9NRG9 546 aa11.96□□□□□ -0.49
PDE4D-221ENST00000514231 FKBPLQ9UIM3 349 aa11.96□□□□□ -0.49
PDE4D-221ENST00000514231 SH3RF1Q7Z6J0 888 aa11.95□□□□□ -0.5
PDE4D-221ENST00000514231 C4orf48Q5BLP8 95 aa11.94□□□□□ -0.5
PDE4D-221ENST00000514231 PDXDC2PQ6P474 469 aa11.94□□□□□ -0.5
PDE4D-221ENST00000514231 SH3BP5LQ7L8J4 393 aa11.94□□□□□ -0.5
PDE4D-221ENST00000514231 ZC3H4Q9UPT8 1303 aaKnown RBP11.93□□□□□ -0.5
PDE4D-221ENST00000514231 BANK1Q8NDB2 785 aa11.93□□□□□ -0.5
PDE4D-221ENST00000514231 CDK15Q96Q40 435 aa11.93□□□□□ -0.5
PDE4D-221ENST00000514231 HMX1Q9NP08 348 aaPredicted RBP11.93□□□□□ -0.5
PDE4D-221ENST00000514231 WASF2Q9Y6W5 498 aa11.93□□□□□ -0.5
PDE4D-221ENST00000514231 AXIN1O15169 862 aa11.92□□□□□ -0.5
PDE4D-221ENST00000514231 HPS1Q92902 700 aa11.92□□□□□ -0.5
PDE4D-221ENST00000514231 PNMA1Q8ND90 353 aa11.91□□□□□ -0.5
PDE4D-221ENST00000514231 EPS8L1Q8TE68 723 aa11.91□□□□□ -0.5
PDE4D-221ENST00000514231 ST8SIA5O15466 376 aa11.9□□□□□ -0.5
PDE4D-221ENST00000514231 C1QTNF2Q9BXJ5 285 aa11.9□□□□□ -0.5
PDE4D-221ENST00000514231 TLL2Q9Y6L7 1015 aa11.9□□□□□ -0.5
PDE4D-221ENST00000514231 GPSM3Q9Y4H4 160 aa11.88□□□□□ -0.51
PDE4D-221ENST00000514231 TRMT44Q8IYL2 757 aaKnown RBP11.87□□□□□ -0.51
PDE4D-221ENST00000514231 TRIM34Q9BYJ4 488 aa11.87□□□□□ -0.51
PDE4D-221ENST00000514231 MAGEB6P1A0A0J9YX57 407 aa11.86□□□□□ -0.51
PDE4D-221ENST00000514231 ADH1CP00326 375 aa11.86□□□□□ -0.51
PDE4D-221ENST00000514231 PTK2Q05397 1052 aa11.86□□□□□ -0.51
PDE4D-221ENST00000514231 ARID5BQ14865 1188 aa11.86□□□□□ -0.51
PDE4D-221ENST00000514231 ZNF787Q6DD87 383 aa11.86□□□□□ -0.51
PDE4D-221ENST00000514231 ARHGAP9Q9BRR9 750 aa11.86□□□□□ -0.51
PDE4D-221ENST00000514231 SOCS7O14512 581 aa11.85□□□□□ -0.51
PDE4D-221ENST00000514231 GJD4Q96KN9 370 aaPredicted RBP11.85□□□□□ -0.51
PDE4D-221ENST00000514231 GRM5P41594 1212 aa11.84□□□□□ -0.51
PDE4D-221ENST00000514231 NR5A1Q13285 461 aa11.84□□□□□ -0.51
PDE4D-221ENST00000514231 DACH1Q9UI36 760 aa11.84□□□□□ -0.51
PDE4D-221ENST00000514231 MAP4K5Q9Y4K4 846 aa11.84□□□□□ -0.51
PDE4D-221ENST00000514231 NNTQ13423 1086 aa11.83□□□□□ -0.52
PDE4D-221ENST00000514231 ERFEQ4G0M1 354 aa11.83□□□□□ -0.52
PDE4D-221ENST00000514231 ZBTB33Q86T24 672 aa11.83□□□□□ -0.52
PDE4D-221ENST00000514231 CARD14Q9BXL6 1004 aa11.83□□□□□ -0.52
PDE4D-221ENST00000514231 OCSTAMPQ9BR26 566 aa11.82□□□□□ -0.52
PDE4D-221ENST00000514231 CAPN5O15484 640 aaPredicted RBP11.8□□□□□ -0.52
PDE4D-221ENST00000514231 VASH1Q7L8A9 365 aaPredicted RBP11.8□□□□□ -0.52
PDE4D-221ENST00000514231 SNRKQ9NRH2 765 aa11.8□□□□□ -0.52
PDE4D-221ENST00000514231 CDV3Q9UKY7 258 aaKnown RBP11.8□□□□□ -0.52
PDE4D-221ENST00000514231 POTECB2RU33 542 aa11.79□□□□□ -0.52
PDE4D-221ENST00000514231 KLF16Q9BXK1 252 aaPredicted RBP11.79□□□□□ -0.52
PDE4D-221ENST00000514231 ATP13A2Q9NQ11 1180 aa11.79□□□□□ -0.52
PDE4D-221ENST00000514231 APBB1O00213 710 aa11.78□□□□□ -0.52
PDE4D-221ENST00000514231 MTMR14Q8NCE2 650 aa11.78□□□□□ -0.52
PDE4D-221ENST00000514231 ADAM32Q8TC27 787 aa11.78□□□□□ -0.52
PDE4D-221ENST00000514231 NR3C2P08235 984 aa11.76□□□□□ -0.53
PDE4D-221ENST00000514231 SLC10A4Q96EP9 437 aa11.76□□□□□ -0.53
PDE4D-221ENST00000514231 GMPR2Q9P2T1 348 aaKnown RBP11.76□□□□□ -0.53
PDE4D-221ENST00000514231 TIMP2P16035 220 aa11.75□□□□□ -0.53
PDE4D-221ENST00000514231 WDR4P57081 412 aaKnown RBP11.75□□□□□ -0.53
PDE4D-221ENST00000514231 ZBBXA8MT70 800 aa11.74□□□□□ -0.53
PDE4D-221ENST00000514231 FSHRP23945 695 aa11.74□□□□□ -0.53
PDE4D-221ENST00000514231 NDUFB9Q9Y6M9 179 aa11.74□□□□□ -0.53
PDE4D-221ENST00000514231 KCTD15Q96SI1 283 aaPredicted RBP11.73□□□□□ -0.53
PDE4D-221ENST00000514231 SENP2Q9HC62 589 aa11.73□□□□□ -0.53
PDE4D-221ENST00000514231 C11orf95C9JLR9 678 aaPredicted RBP11.71□□□□□ -0.53
PDE4D-221ENST00000514231 ZIC2O95409 532 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms