RNA–Protein interactions for RNA: ENST00000514179.5

RAPGEF6-213, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 2

Gene RAPGEF6, Length 2,200 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-213ENST00000514179 SPATA31D1Q6ZQQ2 1576 aa16.56■□□□□ 0.24
RAPGEF6-213ENST00000514179 A2ML1A8K2U0 1454 aa16.56■□□□□ 0.24
RAPGEF6-213ENST00000514179 ATAD2Q6PL18 1390 aa16.56■□□□□ 0.24
RAPGEF6-213ENST00000514179 U2SURPO15042 1029 aaKnown RBP16.55■□□□□ 0.24
RAPGEF6-213ENST00000514179 TNNQ9UQP3 1299 aa16.55■□□□□ 0.24
RAPGEF6-213ENST00000514179 SETD1AO15047 1707 aaKnown RBP16.55■□□□□ 0.24
RAPGEF6-213ENST00000514179 RLBP1P12271 317 aa16.54■□□□□ 0.24
RAPGEF6-213ENST00000514179 PMFBP1Q8TBY8 1022 aa16.54■□□□□ 0.24
RAPGEF6-213ENST00000514179 MAPK8IP3Q9UPT6 1336 aa16.54■□□□□ 0.24
RAPGEF6-213ENST00000514179 KIF20BQ96Q89 1820 aa16.53■□□□□ 0.24
RAPGEF6-213ENST00000514179 KIF13AQ9H1H9 1805 aa16.53■□□□□ 0.24
RAPGEF6-213ENST00000514179 ARHGEF40Q8TER5 1519 aa16.53■□□□□ 0.24
RAPGEF6-213ENST00000514179 ADGRB2O60241 1585 aa16.53■□□□□ 0.24
RAPGEF6-213ENST00000514179 CDK19Q9BWU1 502 aa16.53■□□□□ 0.24
RAPGEF6-213ENST00000514179 RIMS2Q9UQ26 1411 aa16.53■□□□□ 0.24
RAPGEF6-213ENST00000514179 NLRP1Q9C000 1473 aa16.53■□□□□ 0.24
RAPGEF6-213ENST00000514179 TERF2IPQ9NYB0 399 aa16.53■□□□□ 0.24
RAPGEF6-213ENST00000514179 FYB1O15117 783 aa16.52■□□□□ 0.24
RAPGEF6-213ENST00000514179 AAMPQ13685 434 aa16.52■□□□□ 0.24
RAPGEF6-213ENST00000514179 COL3A1P02461 1466 aaPredicted RBP16.52■□□□□ 0.24
RAPGEF6-213ENST00000514179 WAPLQ7Z5K2 1190 aa16.51■□□□□ 0.23
RAPGEF6-213ENST00000514179 TULP1O00294 542 aaPredicted RBP16.51■□□□□ 0.23
RAPGEF6-213ENST00000514179 PCDHB15Q9Y5E8 787 aa16.51■□□□□ 0.23
RAPGEF6-213ENST00000514179 TSR2Q969E8 191 aaKnown RBP16.5■□□□□ 0.23
RAPGEF6-213ENST00000514179 CABP1Q9NZU7 370 aa16.5■□□□□ 0.23
RAPGEF6-213ENST00000514179 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
RAPGEF6-213ENST00000514179 NRXN3Q9Y4C0 1643 aa16.5■□□□□ 0.23
RAPGEF6-213ENST00000514179 NFKBIBQ15653 356 aa16.49■□□□□ 0.23
RAPGEF6-213ENST00000514179 FTSJ3Q8IY81 847 aaKnown RBP16.49■□□□□ 0.23
RAPGEF6-213ENST00000514179 DLC1Q96QB1 1528 aa16.49■□□□□ 0.23
RAPGEF6-213ENST00000514179 MED14O60244 1454 aa16.48■□□□□ 0.23
RAPGEF6-213ENST00000514179 TMPOP42166 694 aaKnown RBP16.48■□□□□ 0.23
RAPGEF6-213ENST00000514179 ZKSCAN2Q63HK3 967 aa16.48■□□□□ 0.23
RAPGEF6-213ENST00000514179 HDGFL2Q7Z4V5 671 aaPredicted RBP16.48■□□□□ 0.23
RAPGEF6-213ENST00000514179 PLEKHF1Q96S99 279 aa16.48■□□□□ 0.23
RAPGEF6-213ENST00000514179 RWDD1Q9H446 243 aaPredicted RBP16.47■□□□□ 0.23
RAPGEF6-213ENST00000514179 EXOSC9Q06265 439 aaKnown RBP16.47■□□□□ 0.23
RAPGEF6-213ENST00000514179 SMC4Q9NTJ3 1288 aa16.47■□□□□ 0.23
RAPGEF6-213ENST00000514179 MVPQ14764 893 aaKnown RBP16.46■□□□□ 0.23
RAPGEF6-213ENST00000514179 SEC24BO95487 1268 aa16.46■□□□□ 0.23
RAPGEF6-213ENST00000514179 CT47B1P0C2W7 299 aaPredicted RBP16.46■□□□□ 0.23
RAPGEF6-213ENST00000514179 DZIP1LQ8IYY4 767 aaKnown RBP16.46■□□□□ 0.23
RAPGEF6-213ENST00000514179 PDZRN3Q9UPQ7 1066 aa16.46■□□□□ 0.23
RAPGEF6-213ENST00000514179 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.45■□□□□ 0.22
RAPGEF6-213ENST00000514179 TRIM35Q9UPQ4 493 aa16.45■□□□□ 0.22
RAPGEF6-213ENST00000514179 VIRMAQ69YN4 1812 aaKnown RBP16.45■□□□□ 0.22
RAPGEF6-213ENST00000514179 DIAPH1O60610 1272 aaKnown RBP16.45■□□□□ 0.22
RAPGEF6-213ENST00000514179 FBLN1P23142 703 aa16.45■□□□□ 0.22
RAPGEF6-213ENST00000514179 USP19O94966 1318 aa16.44■□□□□ 0.22
RAPGEF6-213ENST00000514179 METP08581 1390 aa16.43■□□□□ 0.22
RAPGEF6-213ENST00000514179 RIPK4P57078 832 aa16.43■□□□□ 0.22
RAPGEF6-213ENST00000514179 HOMEZQ8IX15 550 aa16.43■□□□□ 0.22
RAPGEF6-213ENST00000514179 ZMYM3Q14202 1370 aa16.43■□□□□ 0.22
RAPGEF6-213ENST00000514179 MAP2P11137 1827 aaKnown RBP16.43■□□□□ 0.22
RAPGEF6-213ENST00000514179 ATP7BP35670 1465 aa16.42■□□□□ 0.22
RAPGEF6-213ENST00000514179 SSH1Q8WYL5 1049 aa16.42■□□□□ 0.22
RAPGEF6-213ENST00000514179 PNNQ9H307 717 aaKnown RBP16.42■□□□□ 0.22
RAPGEF6-213ENST00000514179 ESF1Q9H501 851 aaKnown RBP16.41■□□□□ 0.22
RAPGEF6-213ENST00000514179 TRIM27P14373 513 aa16.41■□□□□ 0.22
RAPGEF6-213ENST00000514179 ITPRIPQ8IWB1 547 aa16.41■□□□□ 0.22
RAPGEF6-213ENST00000514179 UPF2Q9HAU5 1272 aaKnown RBP16.41■□□□□ 0.22
RAPGEF6-213ENST00000514179 TXNDC2Q86VQ3 553 aa16.4■□□□□ 0.22
RAPGEF6-213ENST00000514179 IL16Q14005 1332 aa16.4■□□□□ 0.22
RAPGEF6-213ENST00000514179 PNPLA6Q8IY17 1366 aa16.4■□□□□ 0.22
RAPGEF6-213ENST00000514179 LRRC7Q96NW7 1537 aa16.39■□□□□ 0.22
RAPGEF6-213ENST00000514179 BECN1Q14457 450 aa16.39■□□□□ 0.22
RAPGEF6-213ENST00000514179 ATF7IPQ6VMQ6 1270 aa16.39■□□□□ 0.21
RAPGEF6-213ENST00000514179 NOB1Q9ULX3 412 aaKnown RBP16.39■□□□□ 0.21
RAPGEF6-213ENST00000514179 NCKAP5LQ9HCH0 1330 aa16.39■□□□□ 0.21
RAPGEF6-213ENST00000514179 KNDC1Q76NI1 1749 aa16.39■□□□□ 0.21
RAPGEF6-213ENST00000514179 PPIP5K1Q6PFW1 1433 aa16.39■□□□□ 0.21
RAPGEF6-213ENST00000514179 GSE1Q14687 1217 aa16.38■□□□□ 0.21
RAPGEF6-213ENST00000514179 DDX19BQ9UMR2 479 aa16.38■□□□□ 0.21
RAPGEF6-213ENST00000514179 WASLO00401 505 aaPredicted RBP16.38■□□□□ 0.21
RAPGEF6-213ENST00000514179 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.38■□□□□ 0.21
RAPGEF6-213ENST00000514179 FRAT2O75474 233 aaPredicted RBP16.37■□□□□ 0.21
RAPGEF6-213ENST00000514179 POLKQ9UBT6 870 aa16.37■□□□□ 0.21
RAPGEF6-213ENST00000514179 ZRANB1Q9UGI0 708 aa16.37■□□□□ 0.21
RAPGEF6-213ENST00000514179 UBR1Q8IWV7 1749 aa16.37■□□□□ 0.21
RAPGEF6-213ENST00000514179 CDC42BPGQ6DT37 1551 aa16.37■□□□□ 0.21
RAPGEF6-213ENST00000514179 TNRQ92752 1358 aa16.37■□□□□ 0.21
RAPGEF6-213ENST00000514179 CPSF1Q10570 1443 aaKnown RBP16.36■□□□□ 0.21
RAPGEF6-213ENST00000514179 FCHSD2O94868 740 aa16.36■□□□□ 0.21
RAPGEF6-213ENST00000514179 NME9Q86XW9 330 aa16.36■□□□□ 0.21
RAPGEF6-213ENST00000514179 PRKAR2BP31323 418 aa16.35■□□□□ 0.21
RAPGEF6-213ENST00000514179 MON2Q7Z3U7 1717 aa16.35■□□□□ 0.21
RAPGEF6-213ENST00000514179 KIF16BQ96L93 1317 aa16.34■□□□□ 0.21
RAPGEF6-213ENST00000514179 TMEM57Q8N5G2 664 aa16.34■□□□□ 0.21
RAPGEF6-213ENST00000514179 EMILIN1Q9Y6C2 1016 aa16.34■□□□□ 0.21
RAPGEF6-213ENST00000514179 CPS1P31327 1500 aa16.34■□□□□ 0.21
RAPGEF6-213ENST00000514179 EDC4Q6P2E9 1401 aaKnown RBP16.34■□□□□ 0.21
RAPGEF6-213ENST00000514179 IPO8O15397 1037 aaKnown RBP16.34■□□□□ 0.21
RAPGEF6-213ENST00000514179 NUDT16Q96DE0 195 aaKnown RBP16.34■□□□□ 0.21
RAPGEF6-213ENST00000514179 ITSN1Q15811 1721 aa16.34■□□□□ 0.21
RAPGEF6-213ENST00000514179 AKAP12Q02952 1782 aa16.33■□□□□ 0.21
RAPGEF6-213ENST00000514179 HDAC1Q13547 482 aaPredicted RBP16.33■□□□□ 0.2
RAPGEF6-213ENST00000514179 TBC1D32Q96NH3 1257 aa16.33■□□□□ 0.2
RAPGEF6-213ENST00000514179 RSPH6AQ9H0K4 717 aa16.33■□□□□ 0.2
RAPGEF6-213ENST00000514179 FAM135BQ49AJ0 1406 aa16.33■□□□□ 0.2
RAPGEF6-213ENST00000514179 HMOX1P09601 288 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms