RNA–Protein interactions for RNA: ENST00000514119.5

TMEM173-212, Transcript of transmembrane protein 173, humanhuman

TSL 3

Gene TMEM173, Length 1,114 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-212ENST00000514119 PSME1Q06323 249 aa25.22■■□□□ 1.63
TMEM173-212ENST00000514119 KTN1Q86UP2 1357 aaKnown RBP25.21■■□□□ 1.63
TMEM173-212ENST00000514119 HDGFL2Q7Z4V5 671 aaPredicted RBP25.21■■□□□ 1.63
TMEM173-212ENST00000514119 BRD4O60885 1362 aaPredicted RBP25.2■■□□□ 1.63
TMEM173-212ENST00000514119 ALS2Q96Q42 1657 aa25.2■■□□□ 1.63
TMEM173-212ENST00000514119 MED1Q15648 1581 aaPredicted RBP25.2■■□□□ 1.62
TMEM173-212ENST00000514119 HSPA1LP34931 641 aa25.2■■□□□ 1.62
TMEM173-212ENST00000514119 SBNO1A3KN83 1393 aa25.19■■□□□ 1.62
TMEM173-212ENST00000514119 PER1O15534 1290 aaPredicted RBP25.19■■□□□ 1.62
TMEM173-212ENST00000514119 TTC21BQ7Z4L5 1316 aa25.18■■□□□ 1.62
TMEM173-212ENST00000514119 EDC4Q6P2E9 1401 aaKnown RBP25.18■■□□□ 1.62
TMEM173-212ENST00000514119 SPATA31A3Q5VYP0 1347 aa25.16■■□□□ 1.62
TMEM173-212ENST00000514119 DDX10Q13206 875 aaKnown RBP25.14■■□□□ 1.62
TMEM173-212ENST00000514119 MARF1Q9Y4F3 1742 aaKnown RBP25.14■■□□□ 1.61
TMEM173-212ENST00000514119 PIK3C2AO00443 1686 aa25.13■■□□□ 1.61
TMEM173-212ENST00000514119 TNS3Q68CZ2 1445 aa25.13■■□□□ 1.61
TMEM173-212ENST00000514119 NSD3Q9BZ95 1437 aa25.13■■□□□ 1.61
TMEM173-212ENST00000514119 TTC21AQ8NDW8 1320 aa25.12■■□□□ 1.61
TMEM173-212ENST00000514119 USP54Q70EL1 1684 aa25.11■■□□□ 1.61
TMEM173-212ENST00000514119 LRRC59Q96AG4 307 aaKnown RBP25.11■■□□□ 1.61
TMEM173-212ENST00000514119 KIF20BQ96Q89 1820 aa25.09■■□□□ 1.61
TMEM173-212ENST00000514119 CRYBG1Q9Y4K1 1723 aa25.09■■□□□ 1.61
TMEM173-212ENST00000514119 FYB1O15117 783 aa25.09■■□□□ 1.61
TMEM173-212ENST00000514119 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.09■■□□□ 1.61
TMEM173-212ENST00000514119 COL22A1Q8NFW1 1626 aaPredicted RBP25.08■■□□□ 1.61
TMEM173-212ENST00000514119 USP31Q70CQ4 1352 aa25.08■■□□□ 1.61
TMEM173-212ENST00000514119 PAK3O75914 559 aaPredicted RBP25.08■■□□□ 1.61
TMEM173-212ENST00000514119 NME9Q86XW9 330 aa25.08■■□□□ 1.61
TMEM173-212ENST00000514119 ZRANB1Q9UGI0 708 aa25.08■■□□□ 1.61
TMEM173-212ENST00000514119 SHPRHQ149N8 1683 aa25.07■■□□□ 1.6
TMEM173-212ENST00000514119 PNPLA6Q8IY17 1366 aa25.07■■□□□ 1.6
TMEM173-212ENST00000514119 AMER1Q5JTC6 1135 aaPredicted RBP25.07■■□□□ 1.6
TMEM173-212ENST00000514119 ABTB2Q8N961 1025 aa25.06■■□□□ 1.6
TMEM173-212ENST00000514119 ARHGEF10O15013 1369 aa25.05■■□□□ 1.6
TMEM173-212ENST00000514119 OVOS2A0A0J9YW53 1432 aa25.03■■□□□ 1.6
TMEM173-212ENST00000514119 OVOS2Q6IE36 1432 aa25.03■■□□□ 1.6
TMEM173-212ENST00000514119 ANKRD26Q9UPS8 1709 aa25.03■■□□□ 1.6
TMEM173-212ENST00000514119 NUTM2GQ5VZR2 741 aa25.03■■□□□ 1.6
TMEM173-212ENST00000514119 KNSTRNQ9Y448 316 aa25.03■■□□□ 1.6
TMEM173-212ENST00000514119 ABCA3Q99758 1704 aa25.02■■□□□ 1.6
TMEM173-212ENST00000514119 USP19O94966 1318 aa25.02■■□□□ 1.6
TMEM173-212ENST00000514119 CGNL1Q0VF96 1302 aa25.02■■□□□ 1.6
TMEM173-212ENST00000514119 JCADQ9P266 1359 aa25.02■■□□□ 1.6
TMEM173-212ENST00000514119 NPC1L1Q9UHC9 1359 aa25.02■■□□□ 1.6
TMEM173-212ENST00000514119 GGNBP2Q9H3C7 697 aa25.01■■□□□ 1.59
TMEM173-212ENST00000514119 SLIT3O75094 1523 aa25.01■■□□□ 1.59
TMEM173-212ENST00000514119 NLRP6P59044 892 aa25■■□□□ 1.59
TMEM173-212ENST00000514119 LMOD2Q6P5Q4 547 aa25■■□□□ 1.59
TMEM173-212ENST00000514119 NLRP13Q86W25 1043 aa25■■□□□ 1.59
TMEM173-212ENST00000514119 PHRF1Q9P1Y6 1649 aaKnown RBP25■■□□□ 1.59
TMEM173-212ENST00000514119 NSD2O96028 1365 aa24.98■■□□□ 1.59
TMEM173-212ENST00000514119 CABLES1Q8TDN4 633 aa24.97■■□□□ 1.59
TMEM173-212ENST00000514119 COG3Q96JB2 828 aa24.94■■□□□ 1.58
TMEM173-212ENST00000514119 NFAT5O94916 1531 aa24.93■■□□□ 1.58
TMEM173-212ENST00000514119 GCP02774 474 aa24.92■■□□□ 1.58
TMEM173-212ENST00000514119 CC2D1BQ5T0F9 858 aaKnown RBP24.92■■□□□ 1.58
TMEM173-212ENST00000514119 PHF23Q9BUL5 403 aaPredicted RBP24.92■■□□□ 1.58
TMEM173-212ENST00000514119 SPATA31A6Q5VVP1 1343 aa24.9■■□□□ 1.58
TMEM173-212ENST00000514119 FBLN1P23142 703 aa24.9■■□□□ 1.58
TMEM173-212ENST00000514119 LRP6O75581 1613 aa24.9■■□□□ 1.58
TMEM173-212ENST00000514119 PLEKHG5O94827 1062 aa24.88■■□□□ 1.57
TMEM173-212ENST00000514119 MAP2P11137 1827 aaKnown RBP24.87■■□□□ 1.57
TMEM173-212ENST00000514119 KCNH5Q8NCM2 988 aa24.87■■□□□ 1.57
TMEM173-212ENST00000514119 AATKQ6ZMQ8 1374 aa24.86■■□□□ 1.57
TMEM173-212ENST00000514119 PARD3Q8TEW0 1356 aa24.86■■□□□ 1.57
TMEM173-212ENST00000514119 MORC1Q86VD1 984 aa24.86■■□□□ 1.57
TMEM173-212ENST00000514119 COL18A1P39060 1754 aa24.85■■□□□ 1.57
TMEM173-212ENST00000514119 LTN1O94822 1766 aa24.85■■□□□ 1.57
TMEM173-212ENST00000514119 CPDO75976 1380 aa24.84■■□□□ 1.57
TMEM173-212ENST00000514119 ARHGEF25Q86VW2 580 aa24.84■■□□□ 1.57
TMEM173-212ENST00000514119 NUTM2BA6NNL0 878 aaPredicted RBP24.83■■□□□ 1.57
TMEM173-212ENST00000514119 NUTM2EB1AL46 878 aaPredicted RBP24.83■■□□□ 1.57
TMEM173-212ENST00000514119 NUTM2AQ8IVF1 878 aaPredicted RBP24.83■■□□□ 1.57
TMEM173-212ENST00000514119 SOX12O15370 315 aa24.82■■□□□ 1.56
TMEM173-212ENST00000514119 ZC3H6P61129 1189 aaKnown RBP24.82■■□□□ 1.56
TMEM173-212ENST00000514119 CNGB1Q14028 1251 aaPredicted RBP24.82■■□□□ 1.56
TMEM173-212ENST00000514119 PEAK1Q9H792 1746 aa24.81■■□□□ 1.56
TMEM173-212ENST00000514119 KIAA0232Q92628 1395 aa24.8■■□□□ 1.56
TMEM173-212ENST00000514119 PRKRIP1Q9H875 184 aaPredicted RBP24.8■■□□□ 1.56
TMEM173-212ENST00000514119 POLKQ9UBT6 870 aa24.8■■□□□ 1.56
TMEM173-212ENST00000514119 MAP3K19Q56UN5 1328 aa24.8■■□□□ 1.56
TMEM173-212ENST00000514119 LMO7Q8WWI1 1683 aa24.79■■□□□ 1.56
TMEM173-212ENST00000514119 FAM83GA6ND36 823 aa24.79■■□□□ 1.56
TMEM173-212ENST00000514119 TNNT2P45379 298 aaPredicted RBP24.79■■□□□ 1.56
TMEM173-212ENST00000514119 RRS1Q15050 365 aaKnown RBP24.79■■□□□ 1.56
TMEM173-212ENST00000514119 RGS17Q9UGC6 210 aaPredicted RBP24.79■■□□□ 1.56
TMEM173-212ENST00000514119 SMG6Q86US8 1419 aaKnown RBP24.78■■□□□ 1.56
TMEM173-212ENST00000514119 HAP1P54257 671 aaPredicted RBP24.78■■□□□ 1.56
TMEM173-212ENST00000514119 RALBP1Q15311 655 aa24.78■■□□□ 1.56
TMEM173-212ENST00000514119 COL14A1Q05707 1796 aaKnown RBP24.77■■□□□ 1.56
TMEM173-212ENST00000514119 RGPD5Q99666 1765 aa24.77■■□□□ 1.56
TMEM173-212ENST00000514119 ADAMTS2O95450 1211 aa24.77■■□□□ 1.56
TMEM173-212ENST00000514119 EMILIN1Q9Y6C2 1016 aa24.77■■□□□ 1.56
TMEM173-212ENST00000514119 PPP2R1AP30153 589 aa24.76■■□□□ 1.55
TMEM173-212ENST00000514119 CHRNA2Q15822 529 aa24.75■■□□□ 1.55
TMEM173-212ENST00000514119 ABCC6O95255 1503 aa24.75■■□□□ 1.55
TMEM173-212ENST00000514119 AXIN2Q9Y2T1 843 aa24.74■■□□□ 1.55
TMEM173-212ENST00000514119 PLCH1Q4KWH8 1693 aa24.74■■□□□ 1.55
TMEM173-212ENST00000514119 CAMTA1Q9Y6Y1 1673 aa24.74■■□□□ 1.55
TMEM173-212ENST00000514119 SLIT2O94813 1529 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms