RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 ARHGEF10O15013 1369 aa11.57□□□□□ -0.56
NEDD4-210ENST00000513957 ATAD2Q6PL18 1390 aa11.57□□□□□ -0.56
NEDD4-210ENST00000513957 NUTM2FA1L443 756 aa11.57□□□□□ -0.56
NEDD4-210ENST00000513957 NUDT16Q96DE0 195 aaKnown RBP11.57□□□□□ -0.56
NEDD4-210ENST00000513957 PUS7Q96PZ0 661 aaKnown RBP11.57□□□□□ -0.56
NEDD4-210ENST00000513957 CRYBG1Q9Y4K1 1723 aa11.56□□□□□ -0.56
NEDD4-210ENST00000513957 LRP6O75581 1613 aa11.56□□□□□ -0.56
NEDD4-210ENST00000513957 SPATA31A3Q5VYP0 1347 aa11.56□□□□□ -0.56
NEDD4-210ENST00000513957 USP47Q96K76 1375 aa11.55□□□□□ -0.56
NEDD4-210ENST00000513957 DISP3Q9P2K9 1392 aa11.55□□□□□ -0.56
NEDD4-210ENST00000513957 NINLQ9Y2I6 1382 aa11.55□□□□□ -0.56
NEDD4-210ENST00000513957 MON2Q7Z3U7 1717 aa11.55□□□□□ -0.56
NEDD4-210ENST00000513957 PPIP5K1Q6PFW1 1433 aa11.55□□□□□ -0.56
NEDD4-210ENST00000513957 PLEKHG3A1L390 1219 aa11.55□□□□□ -0.56
NEDD4-210ENST00000513957 SRPK2P78362 688 aaKnown RBP11.55□□□□□ -0.56
NEDD4-210ENST00000513957 KRT28Q7Z3Y7 464 aa11.54□□□□□ -0.56
NEDD4-210ENST00000513957 DDX17Q92841 729 aaKnown RBP11.54□□□□□ -0.56
NEDD4-210ENST00000513957 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.54□□□□□ -0.56
NEDD4-210ENST00000513957 NRKQ7Z2Y5 1582 aa11.54□□□□□ -0.56
NEDD4-210ENST00000513957 NWD2Q9ULI1 1742 aa11.53□□□□□ -0.56
NEDD4-210ENST00000513957 NGDNQ8NEJ9 315 aaKnown RBP11.53□□□□□ -0.56
NEDD4-210ENST00000513957 PHRF1Q9P1Y6 1649 aaKnown RBP11.53□□□□□ -0.56
NEDD4-210ENST00000513957 PMFBP1Q8TBY8 1022 aa11.52□□□□□ -0.57
NEDD4-210ENST00000513957 USP54Q70EL1 1684 aa11.52□□□□□ -0.57
NEDD4-210ENST00000513957 ACEP12821 1306 aa11.51□□□□□ -0.57
NEDD4-210ENST00000513957 USP6P35125 1406 aa11.51□□□□□ -0.57
NEDD4-210ENST00000513957 ST20-MTHFSA0A0A6YYL1 179 aa11.5□□□□□ -0.57
NEDD4-210ENST00000513957 CDCA8Q53HL2 280 aa11.5□□□□□ -0.57
NEDD4-210ENST00000513957 MEX3CQ5U5Q3 659 aaKnown RBP11.5□□□□□ -0.57
NEDD4-210ENST00000513957 TESK2Q96S53 571 aa11.5□□□□□ -0.57
NEDD4-210ENST00000513957 CABP2Q9NPB3 220 aa11.5□□□□□ -0.57
NEDD4-210ENST00000513957 DAXXQ9UER7 740 aaPredicted RBP11.5□□□□□ -0.57
NEDD4-210ENST00000513957 CPSF1Q10570 1443 aaKnown RBP11.5□□□□□ -0.57
NEDD4-210ENST00000513957 XPCQ01831 940 aaPredicted RBP11.49□□□□□ -0.57
NEDD4-210ENST00000513957 ZNF772Q68DY9 489 aaPredicted RBP11.49□□□□□ -0.57
NEDD4-210ENST00000513957 ZNF692Q9BU19 519 aaPredicted RBP11.49□□□□□ -0.57
NEDD4-210ENST00000513957 PLCH1Q4KWH8 1693 aa11.49□□□□□ -0.57
NEDD4-210ENST00000513957 TMF1P82094 1093 aa11.48□□□□□ -0.57
NEDD4-210ENST00000513957 PIK3C2AO00443 1686 aa11.48□□□□□ -0.57
NEDD4-210ENST00000513957 COL14A1Q05707 1796 aaKnown RBP11.48□□□□□ -0.57
NEDD4-210ENST00000513957 MYOM1P52179 1685 aa11.47□□□□□ -0.57
NEDD4-210ENST00000513957 SSH2Q76I76 1423 aa11.47□□□□□ -0.57
NEDD4-210ENST00000513957 CABP1Q9NZU7 370 aa11.47□□□□□ -0.57
NEDD4-210ENST00000513957 TTC21AQ8NDW8 1320 aa11.46□□□□□ -0.57
NEDD4-210ENST00000513957 NUTM2BA6NNL0 878 aaPredicted RBP11.46□□□□□ -0.57
NEDD4-210ENST00000513957 NUTM2EB1AL46 878 aaPredicted RBP11.46□□□□□ -0.57
NEDD4-210ENST00000513957 EIF4G2P78344 907 aaKnown RBP eCLIP11.46□□□□□ -0.57
NEDD4-210ENST00000513957 NUTM2AQ8IVF1 878 aaPredicted RBP11.46□□□□□ -0.57
NEDD4-210ENST00000513957 CD163L1Q9NR16 1453 aa11.45□□□□□ -0.58
NEDD4-210ENST00000513957 NRAPQ86VF7 1730 aa11.45□□□□□ -0.58
NEDD4-210ENST00000513957 SLIT3O75094 1523 aa11.45□□□□□ -0.58
NEDD4-210ENST00000513957 SLIT2O94813 1529 aa11.45□□□□□ -0.58
NEDD4-210ENST00000513957 CDK12Q9NYV4 1490 aaPredicted RBP11.44□□□□□ -0.58
NEDD4-210ENST00000513957 EDC4Q6P2E9 1401 aaKnown RBP11.44□□□□□ -0.58
NEDD4-210ENST00000513957 KTN1Q86UP2 1357 aaKnown RBP11.44□□□□□ -0.58
NEDD4-210ENST00000513957 PAK3O75914 559 aaPredicted RBP11.44□□□□□ -0.58
NEDD4-210ENST00000513957 FNBP4Q8N3X1 1017 aaPredicted RBP11.44□□□□□ -0.58
NEDD4-210ENST00000513957 TERF2IPQ9NYB0 399 aa11.44□□□□□ -0.58
NEDD4-210ENST00000513957 ABCC6O95255 1503 aa11.44□□□□□ -0.58
NEDD4-210ENST00000513957 ANKRD36BQ8N2N9 1353 aa11.43□□□□□ -0.58
NEDD4-210ENST00000513957 USP19O94966 1318 aa11.43□□□□□ -0.58
NEDD4-210ENST00000513957 LMOD2Q6P5Q4 547 aa11.43□□□□□ -0.58
NEDD4-210ENST00000513957 HDGFL2Q7Z4V5 671 aaPredicted RBP11.43□□□□□ -0.58
NEDD4-210ENST00000513957 NLRP13Q86W25 1043 aa11.43□□□□□ -0.58
NEDD4-210ENST00000513957 C8orf37Q96NL8 207 aa11.43□□□□□ -0.58
NEDD4-210ENST00000513957 RGS17Q9UGC6 210 aaPredicted RBP11.43□□□□□ -0.58
NEDD4-210ENST00000513957 KIF20BQ96Q89 1820 aa11.43□□□□□ -0.58
NEDD4-210ENST00000513957 A0A1W2PP64 1363 aa11.42□□□□□ -0.58
NEDD4-210ENST00000513957 AFF2P51816 1311 aa11.42□□□□□ -0.58
NEDD4-210ENST00000513957 ADAMTS2O95450 1211 aa11.42□□□□□ -0.58
NEDD4-210ENST00000513957 ABTB2Q8N961 1025 aa11.42□□□□□ -0.58
NEDD4-210ENST00000513957 NGLY1Q96IV0 654 aa11.42□□□□□ -0.58
NEDD4-210ENST00000513957 ARXQ96QS3 562 aa11.42□□□□□ -0.58
NEDD4-210ENST00000513957 CPDO75976 1380 aa11.41□□□□□ -0.58
NEDD4-210ENST00000513957 LMO7Q8WWI1 1683 aa11.41□□□□□ -0.58
NEDD4-210ENST00000513957 ERICH6Q7L0X2 663 aa11.41□□□□□ -0.58
NEDD4-210ENST00000513957 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.41□□□□□ -0.58
NEDD4-210ENST00000513957 TTC21BQ7Z4L5 1316 aa11.4□□□□□ -0.58
NEDD4-210ENST00000513957 BCL9LQ86UU0 1499 aa11.4□□□□□ -0.58
NEDD4-210ENST00000513957 TMC1Q8TDI8 760 aa11.4□□□□□ -0.58
NEDD4-210ENST00000513957 ATRNO75882 1429 aa11.4□□□□□ -0.58
NEDD4-210ENST00000513957 USP31Q70CQ4 1352 aa11.4□□□□□ -0.59
NEDD4-210ENST00000513957 LTN1O94822 1766 aa11.39□□□□□ -0.59
NEDD4-210ENST00000513957 USP21Q9UK80 565 aa11.39□□□□□ -0.59
NEDD4-210ENST00000513957 TRPC5Q9UL62 973 aaPredicted RBP11.39□□□□□ -0.59
NEDD4-210ENST00000513957 ANKRD26Q9UPS8 1709 aa11.38□□□□□ -0.59
NEDD4-210ENST00000513957 OVOS2A0A0J9YW53 1432 aa11.38□□□□□ -0.59
NEDD4-210ENST00000513957 OVOS2Q6IE36 1432 aa11.38□□□□□ -0.59
NEDD4-210ENST00000513957 HSPA5P11021 654 aaKnown RBP11.38□□□□□ -0.59
NEDD4-210ENST00000513957 KCNH5Q8NCM2 988 aa11.38□□□□□ -0.59
NEDD4-210ENST00000513957 CABLES1Q8TDN4 633 aa11.38□□□□□ -0.59
NEDD4-210ENST00000513957 SLC12A5Q9H2X9 1139 aa11.38□□□□□ -0.59
NEDD4-210ENST00000513957 NFAT5O94916 1531 aa11.38□□□□□ -0.59
NEDD4-210ENST00000513957 COL18A1P39060 1754 aa11.37□□□□□ -0.59
NEDD4-210ENST00000513957 RXRBP28702 533 aa11.37□□□□□ -0.59
NEDD4-210ENST00000513957 NLRP6P59044 892 aa11.37□□□□□ -0.59
NEDD4-210ENST00000513957 RBM6P78332 1123 aaKnown RBP11.37□□□□□ -0.59
NEDD4-210ENST00000513957 POTEAQ6S8J7 498 aa11.37□□□□□ -0.59
NEDD4-210ENST00000513957 UNC5CLQ8IV45 518 aa11.37□□□□□ -0.59
NEDD4-210ENST00000513957 GCP02774 474 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms