RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 KIF20BQ96Q89 1820 aa15.71■□□□□ 0.1
HTT-213ENST00000513806 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.7■□□□□ 0.1
HTT-213ENST00000513806 CARD14Q9BXL6 1004 aa15.7■□□□□ 0.1
HTT-213ENST00000513806 PANK3Q9H999 370 aa15.7■□□□□ 0.1
HTT-213ENST00000513806 ZRANB1Q9UGI0 708 aa15.7■□□□□ 0.1
HTT-213ENST00000513806 ANKRD36BQ8N2N9 1353 aa15.7■□□□□ 0.1
HTT-213ENST00000513806 TNS3Q68CZ2 1445 aa15.69■□□□□ 0.1
HTT-213ENST00000513806 ABCA3Q99758 1704 aa15.69■□□□□ 0.1
HTT-213ENST00000513806 HDGFL2Q7Z4V5 671 aaPredicted RBP15.69■□□□□ 0.1
HTT-213ENST00000513806 SHPRHQ149N8 1683 aa15.69■□□□□ 0.1
HTT-213ENST00000513806 SSH2Q76I76 1423 aa15.68■□□□□ 0.1
HTT-213ENST00000513806 NINLQ9Y2I6 1382 aa15.68■□□□□ 0.1
HTT-213ENST00000513806 TERF2IPQ9NYB0 399 aa15.68■□□□□ 0.1
HTT-213ENST00000513806 CRYBG1Q9Y4K1 1723 aa15.68■□□□□ 0.1
HTT-213ENST00000513806 NSD3Q9BZ95 1437 aa15.68■□□□□ 0.1
HTT-213ENST00000513806 SPATA31A3Q5VYP0 1347 aa15.68■□□□□ 0.1
HTT-213ENST00000513806 TTC21BQ7Z4L5 1316 aa15.68■□□□□ 0.1
HTT-213ENST00000513806 PNPLA6Q8IY17 1366 aa15.67■□□□□ 0.1
HTT-213ENST00000513806 CABLES1Q8TDN4 633 aa15.67■□□□□ 0.1
HTT-213ENST00000513806 SBNO1A3KN83 1393 aa15.66■□□□□ 0.1
HTT-213ENST00000513806 ZNF316A6NFI3 1004 aaPredicted RBP15.66■□□□□ 0.1
HTT-213ENST00000513806 CNGB1Q14028 1251 aaPredicted RBP15.66■□□□□ 0.1
HTT-213ENST00000513806 NME9Q86XW9 330 aa15.66■□□□□ 0.1
HTT-213ENST00000513806 COL22A1Q8NFW1 1626 aaPredicted RBP15.65■□□□□ 0.1
HTT-213ENST00000513806 PHRF1Q9P1Y6 1649 aaKnown RBP15.65■□□□□ 0.1
HTT-213ENST00000513806 LRRC59Q96AG4 307 aaKnown RBP15.65■□□□□ 0.1
HTT-213ENST00000513806 ZNF692Q9BU19 519 aaPredicted RBP15.65■□□□□ 0.1
HTT-213ENST00000513806 EDC4Q6P2E9 1401 aaKnown RBP15.65■□□□□ 0.1
HTT-213ENST00000513806 MED1Q15648 1581 aaPredicted RBP15.65■□□□□ 0.1
HTT-213ENST00000513806 NUTM2BA6NNL0 878 aaPredicted RBP15.64■□□□□ 0.09
HTT-213ENST00000513806 NUTM2EB1AL46 878 aaPredicted RBP15.64■□□□□ 0.09
HTT-213ENST00000513806 DDX10Q13206 875 aaKnown RBP15.64■□□□□ 0.09
HTT-213ENST00000513806 NUTM2AQ8IVF1 878 aaPredicted RBP15.64■□□□□ 0.09
HTT-213ENST00000513806 ABTB2Q8N961 1025 aa15.64■□□□□ 0.09
HTT-213ENST00000513806 JCADQ9P266 1359 aa15.62■□□□□ 0.09
HTT-213ENST00000513806 SOX12O15370 315 aa15.62■□□□□ 0.09
HTT-213ENST00000513806 ANKRD26Q9UPS8 1709 aa15.62■□□□□ 0.09
HTT-213ENST00000513806 LRP6O75581 1613 aa15.61■□□□□ 0.09
HTT-213ENST00000513806 NLRP6P59044 892 aa15.61■□□□□ 0.09
HTT-213ENST00000513806 GGNBP2Q9H3C7 697 aa15.61■□□□□ 0.09
HTT-213ENST00000513806 USP54Q70EL1 1684 aa15.6■□□□□ 0.09
HTT-213ENST00000513806 TTC21AQ8NDW8 1320 aa15.6■□□□□ 0.09
HTT-213ENST00000513806 ARHGEF10O15013 1369 aa15.6■□□□□ 0.09
HTT-213ENST00000513806 FYB1O15117 783 aa15.59■□□□□ 0.09
HTT-213ENST00000513806 FBLN1P23142 703 aa15.59■□□□□ 0.09
HTT-213ENST00000513806 LTN1O94822 1766 aa15.58■□□□□ 0.08
HTT-213ENST00000513806 PER1O15534 1290 aaPredicted RBP15.58■□□□□ 0.08
HTT-213ENST00000513806 ADAMTS2O95450 1211 aa15.58■□□□□ 0.08
HTT-213ENST00000513806 RGPD5Q99666 1765 aa15.57■□□□□ 0.08
HTT-213ENST00000513806 BRD4O60885 1362 aaPredicted RBP15.57■□□□□ 0.08
HTT-213ENST00000513806 OVOS2A0A0J9YW53 1432 aa15.57■□□□□ 0.08
HTT-213ENST00000513806 OVOS2Q6IE36 1432 aa15.57■□□□□ 0.08
HTT-213ENST00000513806 SLIT3O75094 1523 aa15.57■□□□□ 0.08
HTT-213ENST00000513806 ZBTB7CA1YPR0 619 aa15.56■□□□□ 0.08
HTT-213ENST00000513806 HAP1P54257 671 aaPredicted RBP15.56■□□□□ 0.08
HTT-213ENST00000513806 CC2D1BQ5T0F9 858 aaKnown RBP15.56■□□□□ 0.08
HTT-213ENST00000513806 KNSTRNQ9Y448 316 aa15.56■□□□□ 0.08
HTT-213ENST00000513806 MAP2P11137 1827 aaKnown RBP15.56■□□□□ 0.08
HTT-213ENST00000513806 USP31Q70CQ4 1352 aa15.55■□□□□ 0.08
HTT-213ENST00000513806 USP19O94966 1318 aa15.55■□□□□ 0.08
HTT-213ENST00000513806 ZC3H6P61129 1189 aaKnown RBP15.55■□□□□ 0.08
HTT-213ENST00000513806 NLRP13Q86W25 1043 aa15.55■□□□□ 0.08
HTT-213ENST00000513806 NFAT5O94916 1531 aa15.54■□□□□ 0.08
HTT-213ENST00000513806 CGNL1Q0VF96 1302 aa15.54■□□□□ 0.08
HTT-213ENST00000513806 TNNT2P45379 298 aaPredicted RBP15.54■□□□□ 0.08
HTT-213ENST00000513806 AMER1Q5JTC6 1135 aaPredicted RBP15.54■□□□□ 0.08
HTT-213ENST00000513806 COG3Q96JB2 828 aa15.53■□□□□ 0.08
HTT-213ENST00000513806 PLCH1Q4KWH8 1693 aa15.53■□□□□ 0.08
HTT-213ENST00000513806 SPATA31A6Q5VVP1 1343 aa15.52■□□□□ 0.08
HTT-213ENST00000513806 GCP02774 474 aa15.52■□□□□ 0.08
HTT-213ENST00000513806 CHRNA2Q15822 529 aa15.52■□□□□ 0.08
HTT-213ENST00000513806 KIAA0232Q92628 1395 aa15.51■□□□□ 0.07
HTT-213ENST00000513806 MEX3CQ5U5Q3 659 aaKnown RBP15.51■□□□□ 0.07
HTT-213ENST00000513806 COL18A1P39060 1754 aa15.51■□□□□ 0.07
HTT-213ENST00000513806 PEAK1Q9H792 1746 aa15.51■□□□□ 0.07
HTT-213ENST00000513806 C8orf37Q96NL8 207 aa15.5■□□□□ 0.07
HTT-213ENST00000513806 RRS1Q15050 365 aaKnown RBP15.49■□□□□ 0.07
HTT-213ENST00000513806 COL14A1Q05707 1796 aaKnown RBP15.49■□□□□ 0.07
HTT-213ENST00000513806 FAM83GA6ND36 823 aa15.48■□□□□ 0.07
HTT-213ENST00000513806 MORC1Q86VD1 984 aa15.48■□□□□ 0.07
HTT-213ENST00000513806 NRAPQ86VF7 1730 aa15.48■□□□□ 0.07
HTT-213ENST00000513806 RGPD2P0DJD1 1756 aa15.47■□□□□ 0.07
HTT-213ENST00000513806 PRDM11Q9NQV5 511 aa15.47■□□□□ 0.07
HTT-213ENST00000513806 LMO7Q8WWI1 1683 aa15.47■□□□□ 0.07
HTT-213ENST00000513806 EMILIN1Q9Y6C2 1016 aa15.46■□□□□ 0.07
HTT-213ENST00000513806 NSD2O96028 1365 aa15.46■□□□□ 0.07
HTT-213ENST00000513806 ARHGEF25Q86VW2 580 aa15.45■□□□□ 0.06
HTT-213ENST00000513806 KCNH5Q8NCM2 988 aa15.45■□□□□ 0.06
HTT-213ENST00000513806 NGLY1Q96IV0 654 aa15.45■□□□□ 0.06
HTT-213ENST00000513806 CAMTA1Q9Y6Y1 1673 aa15.44■□□□□ 0.06
HTT-213ENST00000513806 AFF2P51816 1311 aa15.44■□□□□ 0.06
HTT-213ENST00000513806 MAP3K19Q56UN5 1328 aa15.44■□□□□ 0.06
HTT-213ENST00000513806 NWD2Q9ULI1 1742 aa15.44■□□□□ 0.06
HTT-213ENST00000513806 PPM1GO15355 546 aaPredicted RBP15.44■□□□□ 0.06
HTT-213ENST00000513806 AXIN2Q9Y2T1 843 aa15.44■□□□□ 0.06
HTT-213ENST00000513806 BTG4Q9NY30 223 aa15.43■□□□□ 0.06
HTT-213ENST00000513806 CPDO75976 1380 aa15.43■□□□□ 0.06
HTT-213ENST00000513806 NPC1L1Q9UHC9 1359 aa15.42■□□□□ 0.06
HTT-213ENST00000513806 SLIT2O94813 1529 aa15.42■□□□□ 0.06
HTT-213ENST00000513806 LTV1Q96GA3 475 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms