RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 TBX22Q9Y458 520 aa13.52□□□□□ -0.25
TPM3-221ENST00000513769 IQSEC2Q5JU85 1478 aa13.51□□□□□ -0.25
TPM3-221ENST00000513769 EVC2Q86UK5 1308 aa13.51□□□□□ -0.25
TPM3-221ENST00000513769 UBAP1LF5GYI3 381 aa13.51□□□□□ -0.25
TPM3-221ENST00000513769 MKRN3Q13064 507 aaKnown RBP13.5□□□□□ -0.25
TPM3-221ENST00000513769 MYO5BQ9ULV0 1848 aa13.5□□□□□ -0.25
TPM3-221ENST00000513769 ALKQ9UM73 1620 aa13.5□□□□□ -0.25
TPM3-221ENST00000513769 LRPPRCP42704 1394 aaKnown RBP13.49□□□□□ -0.25
TPM3-221ENST00000513769 PLEKHG1Q9ULL1 1385 aa13.49□□□□□ -0.25
TPM3-221ENST00000513769 ZNF335Q9H4Z2 1342 aaPredicted RBP13.49□□□□□ -0.25
TPM3-221ENST00000513769 POLR3GLQ9BT43 218 aa13.49□□□□□ -0.25
TPM3-221ENST00000513769 SLIT1O75093 1534 aa13.49□□□□□ -0.25
TPM3-221ENST00000513769 ARHGAP23Q9P227 1491 aa13.48□□□□□ -0.25
TPM3-221ENST00000513769 YTHDC2Q9H6S0 1430 aaKnown RBP13.48□□□□□ -0.25
TPM3-221ENST00000513769 UBR1Q8IWV7 1749 aa13.48□□□□□ -0.25
TPM3-221ENST00000513769 LTKP29376 864 aa13.48□□□□□ -0.25
TPM3-221ENST00000513769 ANKLE2Q86XL3 938 aa13.48□□□□□ -0.25
TPM3-221ENST00000513769 PANK3Q9H999 370 aa13.48□□□□□ -0.25
TPM3-221ENST00000513769 POGKQ9P215 609 aa13.48□□□□□ -0.25
TPM3-221ENST00000513769 MYO3AQ8NEV4 1616 aa13.48□□□□□ -0.25
TPM3-221ENST00000513769 CENPBP07199 599 aaPredicted RBP13.46□□□□□ -0.25
TPM3-221ENST00000513769 BCANQ96GW7 911 aa13.46□□□□□ -0.25
TPM3-221ENST00000513769 KNSTRNQ9Y448 316 aa13.46□□□□□ -0.25
TPM3-221ENST00000513769 DLC1Q96QB1 1528 aa13.45□□□□□ -0.26
TPM3-221ENST00000513769 FAM135BQ49AJ0 1406 aa13.45□□□□□ -0.26
TPM3-221ENST00000513769 NPC1L1Q9UHC9 1359 aa13.45□□□□□ -0.26
TPM3-221ENST00000513769 PDCD7Q8N8D1 485 aaKnown RBP13.44□□□□□ -0.26
TPM3-221ENST00000513769 CABP2Q9NPB3 220 aa13.44□□□□□ -0.26
TPM3-221ENST00000513769 STK26Q9P289 416 aa13.44□□□□□ -0.26
TPM3-221ENST00000513769 PIK3R4Q99570 1358 aa13.44□□□□□ -0.26
TPM3-221ENST00000513769 NINLQ9Y2I6 1382 aa13.44□□□□□ -0.26
TPM3-221ENST00000513769 MED14O60244 1454 aa13.43□□□□□ -0.26
TPM3-221ENST00000513769 PRAM1Q96QH2 718 aa13.43□□□□□ -0.26
TPM3-221ENST00000513769 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.42□□□□□ -0.263e-10■■■□□ 16.2
TPM3-221ENST00000513769 TECPR2O15040 1411 aa13.41□□□□□ -0.26
TPM3-221ENST00000513769 SLAIN1Q8ND83 568 aa13.41□□□□□ -0.26
TPM3-221ENST00000513769 ADAMTS13Q76LX8 1427 aa13.4□□□□□ -0.26
TPM3-221ENST00000513769 METP08581 1390 aa13.4□□□□□ -0.26
TPM3-221ENST00000513769 ATAD2Q6PL18 1390 aa13.4□□□□□ -0.26
TPM3-221ENST00000513769 POTEMA6NI47 508 aa13.39□□□□□ -0.27
TPM3-221ENST00000513769 PIP4K2BP78356 416 aa13.39□□□□□ -0.27
TPM3-221ENST00000513769 FAM163AQ96GL9 167 aaPredicted RBP13.39□□□□□ -0.27
TPM3-221ENST00000513769 CEP170BQ9Y4F5 1589 aaPredicted RBP13.39□□□□□ -0.27
TPM3-221ENST00000513769 MYBBP1AQ9BQG0 1328 aaKnown RBP13.39□□□□□ -0.27
TPM3-221ENST00000513769 TOM1O60784 492 aa13.38□□□□□ -0.27
TPM3-221ENST00000513769 RNF25Q96BH1 459 aaPredicted RBP13.38□□□□□ -0.27
TPM3-221ENST00000513769 CDK19Q9BWU1 502 aa13.38□□□□□ -0.27
TPM3-221ENST00000513769 WASLO00401 505 aaPredicted RBP13.37□□□□□ -0.27
TPM3-221ENST00000513769 AMER1Q5JTC6 1135 aaPredicted RBP13.37□□□□□ -0.27
TPM3-221ENST00000513769 POTEGQ6S5H5 508 aa13.37□□□□□ -0.27
TPM3-221ENST00000513769 TMC1Q8TDI8 760 aa13.37□□□□□ -0.27
TPM3-221ENST00000513769 TERF2IPQ9NYB0 399 aa13.37□□□□□ -0.27
TPM3-221ENST00000513769 AMOTL2Q9Y2J4 779 aa13.37□□□□□ -0.27
TPM3-221ENST00000513769 ZNF142P52746 1687 aaPredicted RBP13.37□□□□□ -0.27
TPM3-221ENST00000513769 DIP2AQ14689 1571 aa13.37□□□□□ -0.27
TPM3-221ENST00000513769 ARHGEF28Q8N1W1 1705 aaKnown RBP13.36□□□□□ -0.27
TPM3-221ENST00000513769 BRD4O60885 1362 aaPredicted RBP13.36□□□□□ -0.27
TPM3-221ENST00000513769 PARD3Q8TEW0 1356 aa13.36□□□□□ -0.27
TPM3-221ENST00000513769 NRXN3Q9Y4C0 1643 aa13.36□□□□□ -0.27
TPM3-221ENST00000513769 ASXL1Q8IXJ9 1541 aa13.36□□□□□ -0.27
TPM3-221ENST00000513769 RIOK3O14730 519 aaKnown RBP13.36□□□□□ -0.27
TPM3-221ENST00000513769 HSPA1LP34931 641 aa13.36□□□□□ -0.27
TPM3-221ENST00000513769 SRPK2P78362 688 aaKnown RBP13.36□□□□□ -0.27
TPM3-221ENST00000513769 LCE2DQ5TA82 110 aaPredicted RBP13.36□□□□□ -0.27
TPM3-221ENST00000513769 WAPLQ7Z5K2 1190 aa13.36□□□□□ -0.27
TPM3-221ENST00000513769 NLRP13Q86W25 1043 aa13.36□□□□□ -0.27
TPM3-221ENST00000513769 SLC12A5Q9H2X9 1139 aa13.36□□□□□ -0.27
TPM3-221ENST00000513769 SLC26A8Q96RN1 970 aa13.35□□□□□ -0.27
TPM3-221ENST00000513769 CARD14Q9BXL6 1004 aa13.35□□□□□ -0.27
TPM3-221ENST00000513769 MRS2Q9HD23 443 aa13.35□□□□□ -0.27
TPM3-221ENST00000513769 SETD1AO15047 1707 aaKnown RBP13.35□□□□□ -0.27
TPM3-221ENST00000513769 QRICH2Q9H0J4 1663 aa13.34□□□□□ -0.27
TPM3-221ENST00000513769 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.34□□□□□ -0.27
TPM3-221ENST00000513769 MINK1Q8N4C8 1332 aaPredicted RBP13.34□□□□□ -0.27
TPM3-221ENST00000513769 L3MBTL3Q96JM7 780 aaPredicted RBP13.33□□□□□ -0.28
TPM3-221ENST00000513769 ANKRD36BQ8N2N9 1353 aa13.32□□□□□ -0.28
TPM3-221ENST00000513769 SAFB2Q14151 953 aaKnown RBP eCLIP13.32□□□□□ -0.28
TPM3-221ENST00000513769 HDGFL2Q7Z4V5 671 aaPredicted RBP13.32□□□□□ -0.28
TPM3-221ENST00000513769 PNISRQ8TF01 805 aaKnown RBP13.32□□□□□ -0.28
TPM3-221ENST00000513769 CGNL1Q0VF96 1302 aa13.32□□□□□ -0.28
TPM3-221ENST00000513769 KNDC1Q76NI1 1749 aa13.31□□□□□ -0.28
TPM3-221ENST00000513769 NSD2O96028 1365 aa13.31□□□□□ -0.28
TPM3-221ENST00000513769 INSRP06213 1382 aa13.31□□□□□ -0.28
TPM3-221ENST00000513769 KCNA6P17658 529 aa13.3□□□□□ -0.28
TPM3-221ENST00000513769 CC2D1BQ5T0F9 858 aaKnown RBP13.3□□□□□ -0.28
TPM3-221ENST00000513769 C3orf67Q6ZVT6 689 aa13.3□□□□□ -0.28
TPM3-221ENST00000513769 EFCAB3Q8N7B9 438 aa13.3□□□□□ -0.28
TPM3-221ENST00000513769 NUDT16Q96DE0 195 aaKnown RBP13.3□□□□□ -0.28
TPM3-221ENST00000513769 CPS1P31327 1500 aa13.29□□□□□ -0.28
TPM3-221ENST00000513769 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.29□□□□□ -0.28
TPM3-221ENST00000513769 PLEKHG3A1L390 1219 aa13.29□□□□□ -0.28
TPM3-221ENST00000513769 DPY19L2Q6NUT2 758 aa13.29□□□□□ -0.28
TPM3-221ENST00000513769 ZFP91Q96JP5 570 aaPredicted RBP13.29□□□□□ -0.28
TPM3-221ENST00000513769 CABP1Q9NZU7 370 aa13.29□□□□□ -0.28
TPM3-221ENST00000513769 PTCH1Q13635 1447 aa13.29□□□□□ -0.28
TPM3-221ENST00000513769 TULP4Q9NRJ4 1543 aa13.29□□□□□ -0.28
TPM3-221ENST00000513769 YTHDC1Q96MU7 727 aaKnown RBP13.28□□□□□ -0.28
TPM3-221ENST00000513769 ROBO2Q9HCK4 1378 aa13.28□□□□□ -0.28
TPM3-221ENST00000513769 PPP2R1AP30153 589 aa13.27□□□□□ -0.29
TPM3-221ENST00000513769 CCDC184Q52MB2 194 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms