RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 SAMD9LQ8IVG5 1584 aa10.32□□□□□ -0.76
HMGN1P17-201ENST00000513734 DIP2CQ9Y2E4 1556 aa10.32□□□□□ -0.76
HMGN1P17-201ENST00000513734 CD46P15529 392 aa10.32□□□□□ -0.76
HMGN1P17-201ENST00000513734 MYSM1Q5VVJ2 828 aa10.32□□□□□ -0.76
HMGN1P17-201ENST00000513734 HS3ST6Q96QI5 342 aa10.32□□□□□ -0.76
HMGN1P17-201ENST00000513734 VPS9D1Q9Y2B5 631 aa10.32□□□□□ -0.76
HMGN1P17-201ENST00000513734 KIDINS220Q9ULH0 1771 aa10.31□□□□□ -0.76
HMGN1P17-201ENST00000513734 RDH13Q8NBN7 331 aa10.31□□□□□ -0.76
HMGN1P17-201ENST00000513734 PROCA1Q8NCQ7 364 aaPredicted RBP10.31□□□□□ -0.76
HMGN1P17-201ENST00000513734 ARID4BQ4LE39 1312 aaPredicted RBP10.31□□□□□ -0.76
HMGN1P17-201ENST00000513734 POTEB3A0JP26 581 aa10.3□□□□□ -0.76
HMGN1P17-201ENST00000513734 DIXDC1Q155Q3 683 aa10.3□□□□□ -0.76
HMGN1P17-201ENST00000513734 POTEBQ6S5H4 581 aa10.3□□□□□ -0.76
HMGN1P17-201ENST00000513734 NUTM1Q86Y26 1132 aa10.29□□□□□ -0.76
HMGN1P17-201ENST00000513734 SPIRE2Q8WWL2 714 aa10.29□□□□□ -0.76
HMGN1P17-201ENST00000513734 CEP162Q5TB80 1403 aa10.29□□□□□ -0.76
HMGN1P17-201ENST00000513734 TRAPPC8Q9Y2L5 1435 aa10.29□□□□□ -0.76
HMGN1P17-201ENST00000513734 SYCP2Q9BX26 1530 aa10.28□□□□□ -0.76
HMGN1P17-201ENST00000513734 SWT1Q5T5J6 900 aaKnown RBP10.28□□□□□ -0.76
HMGN1P17-201ENST00000513734 ZNF518AQ6AHZ1 1483 aa10.28□□□□□ -0.76
HMGN1P17-201ENST00000513734 MAGI2Q86UL8 1455 aa10.28□□□□□ -0.76
HMGN1P17-201ENST00000513734 TIAM1Q13009 1591 aa10.27□□□□□ -0.76
HMGN1P17-201ENST00000513734 CLK2P49760 499 aaKnown RBP10.27□□□□□ -0.77
HMGN1P17-201ENST00000513734 HDGFP51858 240 aaKnown RBP10.27□□□□□ -0.77
HMGN1P17-201ENST00000513734 FAM98CQ17RN3 349 aaKnown RBP10.27□□□□□ -0.77
HMGN1P17-201ENST00000513734 EFCAB2Q5VUJ9 269 aa10.27□□□□□ -0.77
HMGN1P17-201ENST00000513734 AFAP1Q8N556 730 aa10.27□□□□□ -0.77
HMGN1P17-201ENST00000513734 CDK11AQ9UQ88 783 aaPredicted RBP10.27□□□□□ -0.77
HMGN1P17-201ENST00000513734 ATP10AO60312 1499 aa10.27□□□□□ -0.77
HMGN1P17-201ENST00000513734 C9orf84Q5VXU9 1444 aa10.26□□□□□ -0.77
HMGN1P17-201ENST00000513734 LMTK3Q96Q04 1460 aa10.26□□□□□ -0.77
HMGN1P17-201ENST00000513734 MLECQ14165 292 aa10.26□□□□□ -0.77
HMGN1P17-201ENST00000513734 RSPH4AQ5TD94 716 aa10.26□□□□□ -0.77
HMGN1P17-201ENST00000513734 NBPF3Q9H094 633 aa10.26□□□□□ -0.77
HMGN1P17-201ENST00000513734 SUPT6HQ7KZ85 1726 aaKnown RBP10.26□□□□□ -0.77
HMGN1P17-201ENST00000513734 C3P01024 1663 aa10.25□□□□□ -0.77
HMGN1P17-201ENST00000513734 GPATCH8Q9UKJ3 1502 aaKnown RBP10.25□□□□□ -0.77
HMGN1P17-201ENST00000513734 LCE2DQ5TA82 110 aaPredicted RBP10.25□□□□□ -0.77
HMGN1P17-201ENST00000513734 RIC3Q7Z5B4 369 aa10.25□□□□□ -0.77
HMGN1P17-201ENST00000513734 REREQ9P2R6 1566 aa10.24□□□□□ -0.77
HMGN1P17-201ENST00000513734 INO80Q9ULG1 1556 aaPredicted RBP10.24□□□□□ -0.77
HMGN1P17-201ENST00000513734 LOC105371045A0A1W2PR82 267 aa10.24□□□□□ -0.77
HMGN1P17-201ENST00000513734 LIMD1Q9UGP4 676 aa10.24□□□□□ -0.77
HMGN1P17-201ENST00000513734 EHBP1L1Q8N3D4 1523 aa10.23□□□□□ -0.77
HMGN1P17-201ENST00000513734 PREX1Q8TCU6 1659 aa10.23□□□□□ -0.77
HMGN1P17-201ENST00000513734 TK2O00142 265 aa10.23□□□□□ -0.77
HMGN1P17-201ENST00000513734 SLC10A3P09131 477 aa10.23□□□□□ -0.77
HMGN1P17-201ENST00000513734 FLIIQ13045 1269 aa10.23□□□□□ -0.77
HMGN1P17-201ENST00000513734 LAPTM4BQ86VI4 370 aa10.23□□□□□ -0.77
HMGN1P17-201ENST00000513734 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.23□□□□□ -0.77
HMGN1P17-201ENST00000513734 MLH3Q9UHC1 1453 aa10.23□□□□□ -0.77
HMGN1P17-201ENST00000513734 ADGBQ8N7X0 1667 aa10.22□□□□□ -0.77
HMGN1P17-201ENST00000513734 MOXD2PA6NHM9 499 aa10.22□□□□□ -0.77
HMGN1P17-201ENST00000513734 BHMG1C9JSJ3 638 aaPredicted RBP10.22□□□□□ -0.77
HMGN1P17-201ENST00000513734 KDM4AO75164 1064 aa10.22□□□□□ -0.77
HMGN1P17-201ENST00000513734 GCGRP47871 477 aa10.22□□□□□ -0.77
HMGN1P17-201ENST00000513734 SLC4A3P48751 1232 aa10.22□□□□□ -0.77
HMGN1P17-201ENST00000513734 LSM11P83369 360 aaKnown RBP eCLIP10.22□□□□□ -0.77
HMGN1P17-201ENST00000513734 SAMD7Q7Z3H4 446 aa10.22□□□□□ -0.77
HMGN1P17-201ENST00000513734 SPTLC1O15269 473 aa10.21□□□□□ -0.77
HMGN1P17-201ENST00000513734 NDUFV2P19404 249 aa10.21□□□□□ -0.77
HMGN1P17-201ENST00000513734 CSPP1Q1MSJ5 1256 aa10.21□□□□□ -0.77
HMGN1P17-201ENST00000513734 RSBN1LQ6PCB5 846 aaPredicted RBP10.21□□□□□ -0.77
HMGN1P17-201ENST00000513734 ADGRD1Q6QNK2 874 aa10.21□□□□□ -0.77
HMGN1P17-201ENST00000513734 SLF2Q8IX21 1173 aa10.21□□□□□ -0.77
HMGN1P17-201ENST00000513734 MRPL50Q8N5N7 158 aaKnown RBP10.21□□□□□ -0.77
HMGN1P17-201ENST00000513734 RNF40O75150 1001 aa10.2□□□□□ -0.78
HMGN1P17-201ENST00000513734 ATP7AQ04656 1500 aa10.2□□□□□ -0.78
HMGN1P17-201ENST00000513734 MTUS2Q5JR59 1369 aa10.2□□□□□ -0.78
HMGN1P17-201ENST00000513734 ZMYND15Q9H091 742 aa10.2□□□□□ -0.78
HMGN1P17-201ENST00000513734 ZNF777Q9ULD5 760 aaPredicted RBP10.2□□□□□ -0.78
HMGN1P17-201ENST00000513734 SETD1BQ9UPS6 1966 aaKnown RBP10.19□□□□□ -0.78
HMGN1P17-201ENST00000513734 STRCQ7RTU9 1775 aa10.19□□□□□ -0.78
HMGN1P17-201ENST00000513734 ZNF644Q9H582 1327 aaPredicted RBP10.19□□□□□ -0.78
HMGN1P17-201ENST00000513734 HSPA2P54652 639 aa10.19□□□□□ -0.78
HMGN1P17-201ENST00000513734 ZFRQ96KR1 1074 aaKnown RBP10.19□□□□□ -0.78
HMGN1P17-201ENST00000513734 CLTCQ00610 1675 aaKnown RBP10.18□□□□□ -0.78
HMGN1P17-201ENST00000513734 PLXNC1O60486 1568 aa10.18□□□□□ -0.78
HMGN1P17-201ENST00000513734 AGLP35573 1532 aa10.18□□□□□ -0.78
HMGN1P17-201ENST00000513734 CCNB3Q8WWL7 1395 aa10.18□□□□□ -0.78
HMGN1P17-201ENST00000513734 CEBPAP49715 358 aaPredicted RBP10.18□□□□□ -0.78
HMGN1P17-201ENST00000513734 HNRNPMP52272 730 aaKnown RBP eCLIP10.18□□□□□ -0.78
HMGN1P17-201ENST00000513734 USP46P62068 366 aa10.18□□□□□ -0.78
HMGN1P17-201ENST00000513734 ANKRD13DQ6ZTN6 518 aa10.18□□□□□ -0.78
HMGN1P17-201ENST00000513734 MYT1LQ9UL68 1186 aa10.18□□□□□ -0.78
HMGN1P17-201ENST00000513734 FBXO31Q5XUX0 539 aaPredicted RBP10.17□□□□□ -0.78
HMGN1P17-201ENST00000513734 PCDHB15Q9Y5E8 787 aa10.17□□□□□ -0.78
HMGN1P17-201ENST00000513734 NCOA2Q15596 1464 aa10.17□□□□□ -0.78
HMGN1P17-201ENST00000513734 MROH2AA6NES4 1674 aa10.16□□□□□ -0.78
HMGN1P17-201ENST00000513734 HOXA2O43364 376 aa10.16□□□□□ -0.78
HMGN1P17-201ENST00000513734 GJA5P36382 358 aa10.16□□□□□ -0.78
HMGN1P17-201ENST00000513734 RFC5P40937 340 aa10.16□□□□□ -0.78
HMGN1P17-201ENST00000513734 TUSC1Q2TAM9 212 aa10.16□□□□□ -0.78
HMGN1P17-201ENST00000513734 STAC3Q96MF2 364 aa10.16□□□□□ -0.78
HMGN1P17-201ENST00000513734 CFHP08603 1231 aa10.15□□□□□ -0.78
HMGN1P17-201ENST00000513734 QPCTQ16769 361 aa10.15□□□□□ -0.78
HMGN1P17-201ENST00000513734 CFDP1Q9UEE9 299 aaPredicted RBP10.15□□□□□ -0.78
HMGN1P17-201ENST00000513734 CAMSAP2Q08AD1 1489 aa10.15□□□□□ -0.78
HMGN1P17-201ENST00000513734 MBD5Q9P267 1494 aa10.15□□□□□ -0.78
HMGN1P17-201ENST00000513734 VPS8Q8N3P4 1428 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms