RNA–Protein interactions for RNA: ENST00000513664.1

PDGFC-209, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-209ENST00000513664 ALS2Q96Q42 1657 aa13.15□□□□□ -0.31
PDGFC-209ENST00000513664 TTC21AQ8NDW8 1320 aa13.14□□□□□ -0.31
PDGFC-209ENST00000513664 ANKRD36BQ8N2N9 1353 aa13.14□□□□□ -0.31
PDGFC-209ENST00000513664 SSH2Q76I76 1423 aa13.13□□□□□ -0.31
PDGFC-209ENST00000513664 MON2Q7Z3U7 1717 aa13.13□□□□□ -0.31
PDGFC-209ENST00000513664 CD163L1Q9NR16 1453 aa13.13□□□□□ -0.31
PDGFC-209ENST00000513664 ABTB2Q8N961 1025 aa13.13□□□□□ -0.31
PDGFC-209ENST00000513664 EDC4Q6P2E9 1401 aaKnown RBP13.13□□□□□ -0.31
PDGFC-209ENST00000513664 MED1Q15648 1581 aaPredicted RBP13.12□□□□□ -0.31
PDGFC-209ENST00000513664 A0A1W2PP64 1363 aa13.12□□□□□ -0.31
PDGFC-209ENST00000513664 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
PDGFC-209ENST00000513664 NLRP13Q86W25 1043 aa13.12□□□□□ -0.31
PDGFC-209ENST00000513664 TTC21BQ7Z4L5 1316 aa13.12□□□□□ -0.31
PDGFC-209ENST00000513664 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
PDGFC-209ENST00000513664 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
PDGFC-209ENST00000513664 MEX3CQ5U5Q3 659 aaKnown RBP13.11□□□□□ -0.31
PDGFC-209ENST00000513664 NUTM2AQ8IVF1 878 aaPredicted RBP13.11□□□□□ -0.31
PDGFC-209ENST00000513664 NRKQ7Z2Y5 1582 aa13.11□□□□□ -0.31
PDGFC-209ENST00000513664 MYOM1P52179 1685 aa13.1□□□□□ -0.31
PDGFC-209ENST00000513664 POLR3GLQ9BT43 218 aa13.1□□□□□ -0.31
PDGFC-209ENST00000513664 LRP6O75581 1613 aa13.09□□□□□ -0.31
PDGFC-209ENST00000513664 KIF7Q2M1P5 1343 aa13.09□□□□□ -0.31
PDGFC-209ENST00000513664 PHF23Q9BUL5 403 aaPredicted RBP13.08□□□□□ -0.32
PDGFC-209ENST00000513664 C11orf95C9JLR9 678 aaPredicted RBP13.07□□□□□ -0.32
PDGFC-209ENST00000513664 NLRP6P59044 892 aa13.07□□□□□ -0.32
PDGFC-209ENST00000513664 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.07□□□□□ -0.32
PDGFC-209ENST00000513664 PIK3C2AO00443 1686 aa13.07□□□□□ -0.32
PDGFC-209ENST00000513664 ABCA3Q99758 1704 aa13.07□□□□□ -0.32
PDGFC-209ENST00000513664 USP19O94966 1318 aa13.07□□□□□ -0.32
PDGFC-209ENST00000513664 USP31Q70CQ4 1352 aa13.07□□□□□ -0.32
PDGFC-209ENST00000513664 MARF1Q9Y4F3 1742 aaKnown RBP13.06□□□□□ -0.32
PDGFC-209ENST00000513664 CRYBG1Q9Y4K1 1723 aa13.06□□□□□ -0.32
PDGFC-209ENST00000513664 ADAMTS2O95450 1211 aa13.06□□□□□ -0.32
PDGFC-209ENST00000513664 KCNH5Q8NCM2 988 aa13.06□□□□□ -0.32
PDGFC-209ENST00000513664 CABLES1Q8TDN4 633 aa13.06□□□□□ -0.32
PDGFC-209ENST00000513664 CCDC7Q96M83 1385 aa13.06□□□□□ -0.32
PDGFC-209ENST00000513664 PHRF1Q9P1Y6 1649 aaKnown RBP13.06□□□□□ -0.32
PDGFC-209ENST00000513664 NUTM2GQ5VZR2 741 aa13.05□□□□□ -0.32
PDGFC-209ENST00000513664 NGLY1Q96IV0 654 aa13.05□□□□□ -0.32
PDGFC-209ENST00000513664 C8orf37Q96NL8 207 aa13.05□□□□□ -0.32
PDGFC-209ENST00000513664 USP54Q70EL1 1684 aa13.05□□□□□ -0.32
PDGFC-209ENST00000513664 SLIT3O75094 1523 aa13.04□□□□□ -0.32
PDGFC-209ENST00000513664 GCP02774 474 aa13.04□□□□□ -0.32
PDGFC-209ENST00000513664 ZNF772Q68DY9 489 aaPredicted RBP13.04□□□□□ -0.32
PDGFC-209ENST00000513664 CGNL1Q0VF96 1302 aa13.04□□□□□ -0.32
PDGFC-209ENST00000513664 WASHC2AQ641Q2 1341 aa13.04□□□□□ -0.32
PDGFC-209ENST00000513664 NSD3Q9BZ95 1437 aa13.04□□□□□ -0.32
PDGFC-209ENST00000513664 FNBP4Q8N3X1 1017 aaPredicted RBP13.03□□□□□ -0.32
PDGFC-209ENST00000513664 COG3Q96JB2 828 aa13.03□□□□□ -0.32
PDGFC-209ENST00000513664 PANK3Q9H999 370 aa13.03□□□□□ -0.32
PDGFC-209ENST00000513664 CPDO75976 1380 aa13.03□□□□□ -0.32
PDGFC-209ENST00000513664 PLEKHG5O94827 1062 aa13.02□□□□□ -0.33
PDGFC-209ENST00000513664 NME9Q86XW9 330 aa13.02□□□□□ -0.33
PDGFC-209ENST00000513664 CARD14Q9BXL6 1004 aa13.02□□□□□ -0.33
PDGFC-209ENST00000513664 OVOS2A0A0J9YW53 1432 aa13.02□□□□□ -0.33
PDGFC-209ENST00000513664 OVOS2Q6IE36 1432 aa13.02□□□□□ -0.33
PDGFC-209ENST00000513664 COL14A1Q05707 1796 aaKnown RBP13.02□□□□□ -0.33
PDGFC-209ENST00000513664 FYB1O15117 783 aa13.01□□□□□ -0.33
PDGFC-209ENST00000513664 PRDM11Q9NQV5 511 aa13.01□□□□□ -0.33
PDGFC-209ENST00000513664 KNSTRNQ9Y448 316 aa13.01□□□□□ -0.33
PDGFC-209ENST00000513664 NSD2O96028 1365 aa13.01□□□□□ -0.33
PDGFC-209ENST00000513664 KIF20BQ96Q89 1820 aa13□□□□□ -0.33
PDGFC-209ENST00000513664 NWD2Q9ULI1 1742 aa13□□□□□ -0.33
PDGFC-209ENST00000513664 KIAA0232Q92628 1395 aa13□□□□□ -0.33
PDGFC-209ENST00000513664 AFF2P51816 1311 aa13□□□□□ -0.33
PDGFC-209ENST00000513664 SLIT2O94813 1529 aa12.99□□□□□ -0.33
PDGFC-209ENST00000513664 FAM83GA6ND36 823 aa12.99□□□□□ -0.33
PDGFC-209ENST00000513664 ZC3H6P61129 1189 aaKnown RBP12.99□□□□□ -0.33
PDGFC-209ENST00000513664 USP21Q9UK80 565 aa12.99□□□□□ -0.33
PDGFC-209ENST00000513664 ABCC6O95255 1503 aa12.98□□□□□ -0.33
PDGFC-209ENST00000513664 UNC5CLQ8IV45 518 aa12.98□□□□□ -0.33
PDGFC-209ENST00000513664 NFAT5O94916 1531 aa12.98□□□□□ -0.33
PDGFC-209ENST00000513664 AATKQ6ZMQ8 1374 aa12.97□□□□□ -0.33
PDGFC-209ENST00000513664 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.97□□□□□ -0.33
PDGFC-209ENST00000513664 PLCH1Q4KWH8 1693 aa12.97□□□□□ -0.33
PDGFC-209ENST00000513664 ARHGEF25Q86VW2 580 aa12.97□□□□□ -0.33
PDGFC-209ENST00000513664 GGNBP2Q9H3C7 697 aa12.97□□□□□ -0.33
PDGFC-209ENST00000513664 ZRANB1Q9UGI0 708 aa12.97□□□□□ -0.33
PDGFC-209ENST00000513664 TRPC5Q9UL62 973 aaPredicted RBP12.97□□□□□ -0.33
PDGFC-209ENST00000513664 BTG4Q9NY30 223 aa12.96□□□□□ -0.33
PDGFC-209ENST00000513664 RGS17Q9UGC6 210 aaPredicted RBP12.96□□□□□ -0.33
PDGFC-209ENST00000513664 BCL9LQ86UU0 1499 aa12.96□□□□□ -0.34
PDGFC-209ENST00000513664 SOX12O15370 315 aa12.95□□□□□ -0.34
PDGFC-209ENST00000513664 QTRT2Q9H974 415 aaKnown RBP12.95□□□□□ -0.34
PDGFC-209ENST00000513664 ANKRD26Q9UPS8 1709 aa12.95□□□□□ -0.34
PDGFC-209ENST00000513664 KIF24Q5T7B8 1368 aa12.94□□□□□ -0.34
PDGFC-209ENST00000513664 NPC1L1Q9UHC9 1359 aa12.94□□□□□ -0.34
PDGFC-209ENST00000513664 LMO7Q8WWI1 1683 aa12.94□□□□□ -0.34
PDGFC-209ENST00000513664 PER1O15534 1290 aaPredicted RBP12.94□□□□□ -0.34
PDGFC-209ENST00000513664 EVA1CP58658 441 aa12.94□□□□□ -0.34
PDGFC-209ENST00000513664 CHRNA2Q15822 529 aa12.94□□□□□ -0.34
PDGFC-209ENST00000513664 ATRNO75882 1429 aa12.94□□□□□ -0.34
PDGFC-209ENST00000513664 ZBTB7CA1YPR0 619 aa12.93□□□□□ -0.34
PDGFC-209ENST00000513664 RXRBP28702 533 aa12.93□□□□□ -0.34
PDGFC-209ENST00000513664 RBM6P78332 1123 aaKnown RBP12.93□□□□□ -0.34
PDGFC-209ENST00000513664 VPS72Q15906 364 aa12.93□□□□□ -0.34
PDGFC-209ENST00000513664 BLMP54132 1417 aaPredicted RBP12.93□□□□□ -0.34
PDGFC-209ENST00000513664 NRAPQ86VF7 1730 aa12.93□□□□□ -0.34
PDGFC-209ENST00000513664 RTL1A6NKG5 1358 aa12.93□□□□□ -0.34
PDGFC-209ENST00000513664 LTN1O94822 1766 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms