RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 TRIM46Q7Z4K8 759 aa9.41□□□□□ -0.9
ATP2C1-220ENST00000513636 NPAS3Q8IXF0 933 aa9.41□□□□□ -0.9
ATP2C1-220ENST00000513636 NNTQ13423 1086 aa9.4□□□□□ -0.9
ATP2C1-220ENST00000513636 FAM174AQ8TBP5 190 aa9.4□□□□□ -0.9
ATP2C1-220ENST00000513636 TLL2Q9Y6L7 1015 aa9.4□□□□□ -0.9
ATP2C1-220ENST00000513636 AGERQ15109 404 aa9.39□□□□□ -0.91
ATP2C1-220ENST00000513636 AMHR2Q16671 573 aa9.39□□□□□ -0.91
ATP2C1-220ENST00000513636 ZFP42Q96MM3 310 aa9.39□□□□□ -0.91
ATP2C1-220ENST00000513636 ARID5BQ14865 1188 aa9.38□□□□□ -0.91
ATP2C1-220ENST00000513636 TBC1D2Q9BYX2 928 aa9.38□□□□□ -0.91
ATP2C1-220ENST00000513636 ZMYND10O75800 440 aa9.37□□□□□ -0.91
ATP2C1-220ENST00000513636 VEGFBP49765 207 aa9.37□□□□□ -0.91
ATP2C1-220ENST00000513636 WDR4P57081 412 aaKnown RBP9.37□□□□□ -0.91
ATP2C1-220ENST00000513636 ADH1CP00326 375 aa9.36□□□□□ -0.91
ATP2C1-220ENST00000513636 GJA5P36382 358 aa9.36□□□□□ -0.91
ATP2C1-220ENST00000513636 LYPD8Q6UX82 237 aa9.36□□□□□ -0.91
ATP2C1-220ENST00000513636 MPNDQ8N594 471 aa9.36□□□□□ -0.91
ATP2C1-220ENST00000513636 ZSCAN1Q8NBB4 408 aa9.36□□□□□ -0.91
ATP2C1-220ENST00000513636 ZBTB3Q9H5J0 574 aa9.36□□□□□ -0.91
ATP2C1-220ENST00000513636 GMPRP36959 345 aa9.35□□□□□ -0.91
ATP2C1-220ENST00000513636 MRPL14Q6P1L8 145 aaKnown RBP9.35□□□□□ -0.91
ATP2C1-220ENST00000513636 RSBN1LQ6PCB5 846 aaPredicted RBP9.34□□□□□ -0.91
ATP2C1-220ENST00000513636 ZC3H15Q8WU90 426 aaKnown RBP9.34□□□□□ -0.91
ATP2C1-220ENST00000513636 TSC1Q92574 1164 aa9.34□□□□□ -0.91
ATP2C1-220ENST00000513636 PURBQ96QR8 312 aaKnown RBP9.34□□□□□ -0.91
ATP2C1-220ENST00000513636 NUTM2BA6NNL0 878 aaPredicted RBP9.32□□□□□ -0.92
ATP2C1-220ENST00000513636 NUTM2EB1AL46 878 aaPredicted RBP9.32□□□□□ -0.92
ATP2C1-220ENST00000513636 H3BM21 787 aa9.32□□□□□ -0.92
ATP2C1-220ENST00000513636 UPP2O95045 317 aa9.32□□□□□ -0.92
ATP2C1-220ENST00000513636 SUZ12Q15022 739 aaKnown RBP9.32□□□□□ -0.92
ATP2C1-220ENST00000513636 CSPP1Q1MSJ5 1256 aa9.32□□□□□ -0.92
ATP2C1-220ENST00000513636 NUTM2DQ5VT03 806 aaPredicted RBP9.32□□□□□ -0.92
ATP2C1-220ENST00000513636 RIC3Q7Z5B4 369 aa9.32□□□□□ -0.92
ATP2C1-220ENST00000513636 NUTM2AQ8IVF1 878 aaPredicted RBP9.32□□□□□ -0.92
ATP2C1-220ENST00000513636 PCDHB15Q9Y5E8 787 aa9.32□□□□□ -0.92
ATP2C1-220ENST00000513636 TIMP2P16035 220 aa9.31□□□□□ -0.92
ATP2C1-220ENST00000513636 HRCP23327 699 aa9.31□□□□□ -0.92
ATP2C1-220ENST00000513636 BPHLQ86WA6 291 aaPredicted RBP9.31□□□□□ -0.92
ATP2C1-220ENST00000513636 SPTLC1O15269 473 aa9.3□□□□□ -0.92
ATP2C1-220ENST00000513636 MAN1A2O60476 641 aa9.3□□□□□ -0.92
ATP2C1-220ENST00000513636 PRPF38BQ5VTL8 546 aaKnown RBP9.3□□□□□ -0.92
ATP2C1-220ENST00000513636 FOXJ1Q92949 421 aa9.3□□□□□ -0.92
ATP2C1-220ENST00000513636 CFAP99D6REC4 459 aa9.29□□□□□ -0.92
ATP2C1-220ENST00000513636 ZIC2O95409 532 aaPredicted RBP9.29□□□□□ -0.92
ATP2C1-220ENST00000513636 NR5A1Q13285 461 aa9.29□□□□□ -0.92
ATP2C1-220ENST00000513636 ARMC2Q8NEN0 867 aa9.29□□□□□ -0.92
ATP2C1-220ENST00000513636 MAP10Q9P2G4 905 aa9.29□□□□□ -0.92
ATP2C1-220ENST00000513636 C6orf118Q5T5N4 469 aa9.28□□□□□ -0.92
ATP2C1-220ENST00000513636 PARP9Q8IXQ6 854 aa9.28□□□□□ -0.92
ATP2C1-220ENST00000513636 AK7Q96M32 723 aa9.28□□□□□ -0.92
ATP2C1-220ENST00000513636 CDK15Q96Q40 435 aa9.28□□□□□ -0.92
ATP2C1-220ENST00000513636 TRIM66O15016 1216 aa9.27□□□□□ -0.93
ATP2C1-220ENST00000513636 BMP2P12643 396 aa9.26□□□□□ -0.93
ATP2C1-220ENST00000513636 CABLES1Q8TDN4 633 aa9.26□□□□□ -0.93
ATP2C1-220ENST00000513636 SOBPA7XYQ1 873 aa9.25□□□□□ -0.93
ATP2C1-220ENST00000513636 ERBB4Q15303 1308 aa9.25□□□□□ -0.93
ATP2C1-220ENST00000513636 F12P00748 615 aaPredicted RBP9.24□□□□□ -0.93
ATP2C1-220ENST00000513636 NBPF14Q5TI25 921 aa9.24□□□□□ -0.93
ATP2C1-220ENST00000513636 HELBQ8NG08 1087 aaPredicted RBP9.24□□□□□ -0.93
ATP2C1-220ENST00000513636 ITPKCQ96DU7 683 aa9.24□□□□□ -0.93
ATP2C1-220ENST00000513636 ZFAND3Q9H8U3 227 aa9.24□□□□□ -0.93
ATP2C1-220ENST00000513636 KLF16Q9BXK1 252 aaPredicted RBP9.23□□□□□ -0.93
ATP2C1-220ENST00000513636 VASH1Q7L8A9 365 aaPredicted RBP9.22□□□□□ -0.93
ATP2C1-220ENST00000513636 MAGEB6P1A0A0J9YX57 407 aa9.21□□□□□ -0.94
ATP2C1-220ENST00000513636 PER1O15534 1290 aaPredicted RBP9.21□□□□□ -0.94
ATP2C1-220ENST00000513636 LORP23490 312 aaPredicted RBP9.21□□□□□ -0.94
ATP2C1-220ENST00000513636 NR3C2P08235 984 aa9.2□□□□□ -0.94
ATP2C1-220ENST00000513636 GRM5P41594 1212 aa9.2□□□□□ -0.94
ATP2C1-220ENST00000513636 LINC00528Q8N1L1 170 aa9.2□□□□□ -0.94
ATP2C1-220ENST00000513636 FSHRP23945 695 aa9.19□□□□□ -0.94
ATP2C1-220ENST00000513636 C4orf48Q5BLP8 95 aa9.19□□□□□ -0.94
ATP2C1-220ENST00000513636 MYSM1Q5VVJ2 828 aa9.19□□□□□ -0.94
ATP2C1-220ENST00000513636 QPCTQ16769 361 aa9.18□□□□□ -0.94
ATP2C1-220ENST00000513636 TSEN34Q9BSV6 310 aaKnown RBP9.18□□□□□ -0.94
ATP2C1-220ENST00000513636 LIMD1Q9UGP4 676 aa9.18□□□□□ -0.94
ATP2C1-220ENST00000513636 ATP1B4Q9UN42 357 aaPredicted RBP9.18□□□□□ -0.94
ATP2C1-220ENST00000513636 EMILIN1Q9Y6C2 1016 aa9.18□□□□□ -0.94
ATP2C1-220ENST00000513636 PPFIA3O75145 1194 aa9.17□□□□□ -0.94
ATP2C1-220ENST00000513636 PDE4DQ08499 809 aa9.17□□□□□ -0.94
ATP2C1-220ENST00000513636 TUSC1Q2TAM9 212 aa9.17□□□□□ -0.94
ATP2C1-220ENST00000513636 MEIOBQ8N635 442 aa9.17□□□□□ -0.94
ATP2C1-220ENST00000513636 CARD14Q9BXL6 1004 aa9.17□□□□□ -0.94
ATP2C1-220ENST00000513636 RSPH6AQ9H0K4 717 aa9.17□□□□□ -0.94
ATP2C1-220ENST00000513636 LILRB3O75022 631 aa9.16□□□□□ -0.94
ATP2C1-220ENST00000513636 VSIG8P0DPA2 414 aa9.16□□□□□ -0.94
ATP2C1-220ENST00000513636 CCDC116Q8IYX3 515 aa9.16□□□□□ -0.94
ATP2C1-220ENST00000513636 KCTD17Q8N5Z5 321 aa9.15□□□□□ -0.94
ATP2C1-220ENST00000513636 GPKOWQ92917 476 aaPredicted RBP eCLIP9.15□□□□□ -0.949e-6■■□□□ 14.5
ATP2C1-220ENST00000513636 PGPEP1Q9NXJ5 209 aa9.15□□□□□ -0.94
ATP2C1-220ENST00000513636 MAP4K5Q9Y4K4 846 aa9.15□□□□□ -0.94
ATP2C1-220ENST00000513636 CLK2P49760 499 aaKnown RBP9.14□□□□□ -0.95
ATP2C1-220ENST00000513636 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.14□□□□□ -0.95
ATP2C1-220ENST00000513636 SOS2Q07890 1332 aaPredicted RBP9.13□□□□□ -0.95
ATP2C1-220ENST00000513636 RTL5Q5HYW3 569 aaPredicted RBP9.13□□□□□ -0.95
ATP2C1-220ENST00000513636 SH3RF1Q7Z6J0 888 aa9.13□□□□□ -0.95
ATP2C1-220ENST00000513636 C1QTNF2Q9BXJ5 285 aa9.13□□□□□ -0.95
ATP2C1-220ENST00000513636 POLR3EQ9NVU0 708 aa9.13□□□□□ -0.95
ATP2C1-220ENST00000513636 TTLL8A6PVC2 850 aa9.12□□□□□ -0.95
ATP2C1-220ENST00000513636 TRMT44Q8IYL2 757 aaKnown RBP9.12□□□□□ -0.95
ATP2C1-220ENST00000513636 SH3BP5LQ7L8J4 393 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms