RNA–Protein interactions for RNA: ENST00000513405.1

AP001999.1-201, humanhuman

TSL 2 BASIC

Gene AP001999.1, Length 3,684 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001999.1-201ENST00000513405 AEBP1Q8IUX7 1158 aa17■□□□□ 0.31
AP001999.1-201ENST00000513405 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
AP001999.1-201ENST00000513405 EIF2S2P20042 333 aaKnown RBP17■□□□□ 0.31
AP001999.1-201ENST00000513405 TRIM35Q9UPQ4 493 aa17■□□□□ 0.31
AP001999.1-201ENST00000513405 F6X3S4 739 aa17■□□□□ 0.31
AP001999.1-201ENST00000513405 MCM4P33991 863 aa17■□□□□ 0.31
AP001999.1-201ENST00000513405 DDX49Q9Y6V7 483 aaKnown RBP16.99■□□□□ 0.31
AP001999.1-201ENST00000513405 ABCC2Q92887 1545 aa16.99■□□□□ 0.31
AP001999.1-201ENST00000513405 A0A1W2PP64 1363 aa16.98■□□□□ 0.31
AP001999.1-201ENST00000513405 POLR3AO14802 1390 aaPredicted RBP16.98■□□□□ 0.31
AP001999.1-201ENST00000513405 GNAI1P63096 354 aa16.98■□□□□ 0.31
AP001999.1-201ENST00000513405 C8orf58Q8NAV2 365 aa16.98■□□□□ 0.31
AP001999.1-201ENST00000513405 OS9Q13438 667 aaPredicted RBP16.98■□□□□ 0.31
AP001999.1-201ENST00000513405 CASC1Q6TDU7 716 aa16.98■□□□□ 0.31
AP001999.1-201ENST00000513405 VSIG10Q8N0Z9 540 aa16.98■□□□□ 0.31
AP001999.1-201ENST00000513405 MPNDQ8N594 471 aa16.97■□□□□ 0.31
AP001999.1-201ENST00000513405 GBP4Q96PP9 640 aa16.97■□□□□ 0.31
AP001999.1-201ENST00000513405 ERVK-7P63135 1459 aa16.97■□□□□ 0.31
AP001999.1-201ENST00000513405 PTPRTO14522 1441 aa16.97■□□□□ 0.31
AP001999.1-201ENST00000513405 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
AP001999.1-201ENST00000513405 CALD1Q05682 793 aaKnown RBP16.97■□□□□ 0.31
AP001999.1-201ENST00000513405 MAST1Q9Y2H9 1570 aa16.96■□□□□ 0.31
AP001999.1-201ENST00000513405 POLKQ9UBT6 870 aa16.96■□□□□ 0.31
AP001999.1-201ENST00000513405 MBIPQ9NS73 344 aa16.96■□□□□ 0.31
AP001999.1-201ENST00000513405 SLC52A1Q9NWF4 448 aa16.96■□□□□ 0.31
AP001999.1-201ENST00000513405 ARHGEF5Q12774 1597 aa16.96■□□□□ 0.3
AP001999.1-201ENST00000513405 DTNBO60941 627 aa16.95■□□□□ 0.3
AP001999.1-201ENST00000513405 CEBPAP49715 358 aaPredicted RBP16.95■□□□□ 0.3
AP001999.1-201ENST00000513405 GLIPR1L2Q4G1C9 344 aa16.95■□□□□ 0.3
AP001999.1-201ENST00000513405 NUDT16Q96DE0 195 aaKnown RBP16.95■□□□□ 0.3
AP001999.1-201ENST00000513405 NFE2L2Q16236 605 aa16.95■□□□□ 0.3
AP001999.1-201ENST00000513405 MCTP1Q6DN14 999 aa16.95■□□□□ 0.3
AP001999.1-201ENST00000513405 FKBP5Q13451 457 aaPredicted RBP16.94■□□□□ 0.3
AP001999.1-201ENST00000513405 TSPYL4Q9UJ04 414 aa16.94■□□□□ 0.3
AP001999.1-201ENST00000513405 FCHSD2O94868 740 aa16.94■□□□□ 0.3
AP001999.1-201ENST00000513405 TRPM1Q7Z4N2 1603 aa16.94■□□□□ 0.3
AP001999.1-201ENST00000513405 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.94■□□□□ 0.3
AP001999.1-201ENST00000513405 CCDC9Q9Y3X0 531 aaKnown RBP16.94■□□□□ 0.3
AP001999.1-201ENST00000513405 MAP4K4O95819 1239 aaPredicted RBP16.93■□□□□ 0.3
AP001999.1-201ENST00000513405 EXOC6BQ9Y2D4 811 aa16.93■□□□□ 0.3
AP001999.1-201ENST00000513405 PRDM15P57071 1507 aaPredicted RBP16.93■□□□□ 0.3
AP001999.1-201ENST00000513405 STK31Q9BXU1 1019 aa16.93■□□□□ 0.3
AP001999.1-201ENST00000513405 CDC42BPBQ9Y5S2 1711 aa16.93■□□□□ 0.3
AP001999.1-201ENST00000513405 USP19O94966 1318 aa16.93■□□□□ 0.3
AP001999.1-201ENST00000513405 OTUD7AQ8TE49 926 aaPredicted RBP16.92■□□□□ 0.3
AP001999.1-201ENST00000513405 CHMP4BQ9H444 224 aaKnown RBP16.92■□□□□ 0.3
AP001999.1-201ENST00000513405 ADCY10Q96PN6 1610 aa16.92■□□□□ 0.3
AP001999.1-201ENST00000513405 RTEL1-TNFRSF6BF6WH68 1400 aa16.91■□□□□ 0.3
AP001999.1-201ENST00000513405 HSP90AB2PQ58FF8 381 aa16.91■□□□□ 0.3
AP001999.1-201ENST00000513405 FOXO3O43524 673 aa16.91■□□□□ 0.3
AP001999.1-201ENST00000513405 API5Q9BZZ5 524 aaKnown RBP16.91■□□□□ 0.3
AP001999.1-201ENST00000513405 RPGRIP1LQ68CZ1 1315 aa16.91■□□□□ 0.3
AP001999.1-201ENST00000513405 TBC1D9Q6ZT07 1266 aa16.9■□□□□ 0.3
AP001999.1-201ENST00000513405 ANO2Q9NQ90 1003 aa16.9■□□□□ 0.3
AP001999.1-201ENST00000513405 ANKRD36BQ8N2N9 1353 aa16.9■□□□□ 0.3
AP001999.1-201ENST00000513405 PTMAP06454 111 aaKnown RBP16.9■□□□□ 0.3
AP001999.1-201ENST00000513405 ZBTB40Q9NUA8 1239 aa16.9■□□□□ 0.3
AP001999.1-201ENST00000513405 INSRP06213 1382 aa16.9■□□□□ 0.3
AP001999.1-201ENST00000513405 NPATQ14207 1427 aa16.9■□□□□ 0.3
AP001999.1-201ENST00000513405 SSFA2P28290 1259 aa16.9■□□□□ 0.3
AP001999.1-201ENST00000513405 LMOD3Q0VAK6 560 aa16.9■□□□□ 0.3
AP001999.1-201ENST00000513405 LARP6Q9BRS8 491 aaKnown RBP16.9■□□□□ 0.3
AP001999.1-201ENST00000513405 EIF2AK4Q9P2K8 1649 aaKnown RBP16.89■□□□□ 0.29
AP001999.1-201ENST00000513405 USHBP1Q8N6Y0 703 aa16.89■□□□□ 0.29
AP001999.1-201ENST00000513405 NLRP6P59044 892 aa16.89■□□□□ 0.29
AP001999.1-201ENST00000513405 RNF214Q8ND24 703 aa16.89■□□□□ 0.29
AP001999.1-201ENST00000513405 IL1RAPL2Q9NP60 686 aa16.89■□□□□ 0.29
AP001999.1-201ENST00000513405 PREX2Q70Z35 1606 aa16.89■□□□□ 0.29
AP001999.1-201ENST00000513405 DNTTIP2Q5QJE6 756 aaKnown RBP16.88■□□□□ 0.29
AP001999.1-201ENST00000513405 TNPO1Q92973 898 aaKnown RBP16.88■□□□□ 0.29
AP001999.1-201ENST00000513405 CROCC2H7BZ55 1655 aa16.88■□□□□ 0.29
AP001999.1-201ENST00000513405 VAMP4O75379 141 aa16.88■□□□□ 0.29
AP001999.1-201ENST00000513405 CDC45O75419 566 aa16.87■□□□□ 0.29
AP001999.1-201ENST00000513405 CAVIN1Q6NZI2 390 aaKnown RBP16.87■□□□□ 0.29
AP001999.1-201ENST00000513405 CHAMP1Q96JM3 812 aa16.87■□□□□ 0.29
AP001999.1-201ENST00000513405 CCDC61Q9Y6R9 512 aa16.87■□□□□ 0.29
AP001999.1-201ENST00000513405 ATP7AQ04656 1500 aa16.87■□□□□ 0.29
AP001999.1-201ENST00000513405 DDX11L8A8MPP1 907 aa16.87■□□□□ 0.29
AP001999.1-201ENST00000513405 XRCC6P12956 609 aaKnown RBP eCLIP16.86■□□□□ 0.29
AP001999.1-201ENST00000513405 KCNJ4P48050 445 aa16.86■□□□□ 0.29
AP001999.1-201ENST00000513405 TRHP20396 242 aaPredicted RBP16.86■□□□□ 0.29
AP001999.1-201ENST00000513405 MEIS3Q99687 375 aa16.86■□□□□ 0.29
AP001999.1-201ENST00000513405 DDX54Q8TDD1 881 aaKnown RBP16.86■□□□□ 0.29
AP001999.1-201ENST00000513405 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.85■□□□□ 0.29
AP001999.1-201ENST00000513405 NEK4P51957 841 aa16.85■□□□□ 0.29
AP001999.1-201ENST00000513405 XPCQ01831 940 aaPredicted RBP16.85■□□□□ 0.29
AP001999.1-201ENST00000513405 A0A0G2JS52 829 aa16.85■□□□□ 0.29
AP001999.1-201ENST00000513405 NPC1L1Q9UHC9 1359 aa16.84■□□□□ 0.29
AP001999.1-201ENST00000513405 PRPF40AO75400 957 aaKnown RBP16.84■□□□□ 0.29
AP001999.1-201ENST00000513405 NUCB1Q02818 461 aa16.84■□□□□ 0.29
AP001999.1-201ENST00000513405 PKNOX2Q96KN3 472 aa16.84■□□□□ 0.29
AP001999.1-201ENST00000513405 CHMP3Q9Y3E7 222 aa16.84■□□□□ 0.29
AP001999.1-201ENST00000513405 NINLQ9Y2I6 1382 aa16.84■□□□□ 0.29
AP001999.1-201ENST00000513405 WASLO00401 505 aaPredicted RBP16.84■□□□□ 0.29
AP001999.1-201ENST00000513405 HDGFP51858 240 aaKnown RBP16.84■□□□□ 0.29
AP001999.1-201ENST00000513405 CCDC27Q2M243 656 aa16.84■□□□□ 0.29
AP001999.1-201ENST00000513405 UPF3BQ9BZI7 483 aaKnown RBP16.84■□□□□ 0.29
AP001999.1-201ENST00000513405 ANXA1P04083 346 aa16.83■□□□□ 0.29
AP001999.1-201ENST00000513405 RSPH6AQ9H0K4 717 aa16.83■□□□□ 0.29
AP001999.1-201ENST00000513405 HMMRO75330 724 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms