RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 RGS17Q9UGC6 210 aaPredicted RBP24.25■■□□□ 1.47
DDR1-270ENST00000513043 ARHGEF10O15013 1369 aa24.25■■□□□ 1.47
DDR1-270ENST00000513043 CABLES1Q8TDN4 633 aa24.24■■□□□ 1.47
DDR1-270ENST00000513043 KTN1Q86UP2 1357 aaKnown RBP24.24■■□□□ 1.47
DDR1-270ENST00000513043 CPSF1Q10570 1443 aaKnown RBP24.24■■□□□ 1.47
DDR1-270ENST00000513043 CD163L1Q9NR16 1453 aa24.24■■□□□ 1.47
DDR1-270ENST00000513043 C11orf95C9JLR9 678 aaPredicted RBP24.23■■□□□ 1.47
DDR1-270ENST00000513043 MEX3CQ5U5Q3 659 aaKnown RBP24.23■■□□□ 1.47
DDR1-270ENST00000513043 HDGFL2Q7Z4V5 671 aaPredicted RBP24.23■■□□□ 1.47
DDR1-270ENST00000513043 ZNF692Q9BU19 519 aaPredicted RBP24.23■■□□□ 1.47
DDR1-270ENST00000513043 COL22A1Q8NFW1 1626 aaPredicted RBP24.23■■□□□ 1.47
DDR1-270ENST00000513043 ALS2Q96Q42 1657 aa24.23■■□□□ 1.47
DDR1-270ENST00000513043 AKAP12Q02952 1782 aa24.22■■□□□ 1.47
DDR1-270ENST00000513043 ADAMTS2O95450 1211 aa24.22■■□□□ 1.47
DDR1-270ENST00000513043 TERF2IPQ9NYB0 399 aa24.22■■□□□ 1.47
DDR1-270ENST00000513043 A0A1W2PP64 1363 aa24.21■■□□□ 1.47
DDR1-270ENST00000513043 NINLQ9Y2I6 1382 aa24.21■■□□□ 1.47
DDR1-270ENST00000513043 ZEB1P37275 1124 aaPredicted RBP24.2■■□□□ 1.46
DDR1-270ENST00000513043 HAP1P54257 671 aaPredicted RBP24.2■■□□□ 1.46
DDR1-270ENST00000513043 ABTB2Q8N961 1025 aa24.2■■□□□ 1.46
DDR1-270ENST00000513043 SSH2Q76I76 1423 aa24.18■■□□□ 1.46
DDR1-270ENST00000513043 TTC21BQ7Z4L5 1316 aa24.18■■□□□ 1.46
DDR1-270ENST00000513043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.18■■□□□ 1.46
DDR1-270ENST00000513043 BRD4O60885 1362 aaPredicted RBP24.17■■□□□ 1.46
DDR1-270ENST00000513043 MON2Q7Z3U7 1717 aa24.17■■□□□ 1.46
DDR1-270ENST00000513043 MYOM1P52179 1685 aa24.16■■□□□ 1.46
DDR1-270ENST00000513043 C8orf37Q96NL8 207 aa24.15■■□□□ 1.46
DDR1-270ENST00000513043 NRKQ7Z2Y5 1582 aa24.15■■□□□ 1.46
DDR1-270ENST00000513043 ANKRD36BQ8N2N9 1353 aa24.15■■□□□ 1.46
DDR1-270ENST00000513043 KIF7Q2M1P5 1343 aa24.13■■□□□ 1.45
DDR1-270ENST00000513043 NLRP6P59044 892 aa24.13■■□□□ 1.45
DDR1-270ENST00000513043 ABCA3Q99758 1704 aa24.13■■□□□ 1.45
DDR1-270ENST00000513043 TTC21AQ8NDW8 1320 aa24.12■■□□□ 1.45
DDR1-270ENST00000513043 EDC4Q6P2E9 1401 aaKnown RBP24.12■■□□□ 1.45
DDR1-270ENST00000513043 PIK3C2AO00443 1686 aa24.11■■□□□ 1.45
DDR1-270ENST00000513043 POTEAQ6S8J7 498 aa24.11■■□□□ 1.45
DDR1-270ENST00000513043 NLRP13Q86W25 1043 aa24.11■■□□□ 1.45
DDR1-270ENST00000513043 NME9Q86XW9 330 aa24.11■■□□□ 1.45
DDR1-270ENST00000513043 ZRANB1Q9UGI0 708 aa24.11■■□□□ 1.45
DDR1-270ENST00000513043 NGLY1Q96IV0 654 aa24.1■■□□□ 1.45
DDR1-270ENST00000513043 CRYBG1Q9Y4K1 1723 aa24.08■■□□□ 1.45
DDR1-270ENST00000513043 USP19O94966 1318 aa24.08■■□□□ 1.44
DDR1-270ENST00000513043 PHRF1Q9P1Y6 1649 aaKnown RBP24.07■■□□□ 1.44
DDR1-270ENST00000513043 CARD14Q9BXL6 1004 aa24.07■■□□□ 1.44
DDR1-270ENST00000513043 AFF2P51816 1311 aa24.07■■□□□ 1.44
DDR1-270ENST00000513043 SOX12O15370 315 aa24.06■■□□□ 1.44
DDR1-270ENST00000513043 ZC3H6P61129 1189 aaKnown RBP24.06■■□□□ 1.44
DDR1-270ENST00000513043 WASHC2AQ641Q2 1341 aa24.06■■□□□ 1.44
DDR1-270ENST00000513043 CCDC7Q96M83 1385 aa24.05■■□□□ 1.44
DDR1-270ENST00000513043 NSD3Q9BZ95 1437 aa24.05■■□□□ 1.44
DDR1-270ENST00000513043 MARF1Q9Y4F3 1742 aaKnown RBP24.04■■□□□ 1.44
DDR1-270ENST00000513043 PANK3Q9H999 370 aa24.04■■□□□ 1.44
DDR1-270ENST00000513043 GCP02774 474 aa24.03■■□□□ 1.44
DDR1-270ENST00000513043 ZBTB7CA1YPR0 619 aa24.02■■□□□ 1.44
DDR1-270ENST00000513043 FAM83GA6ND36 823 aa24.02■■□□□ 1.44
DDR1-270ENST00000513043 PRDM11Q9NQV5 511 aa24.02■■□□□ 1.44
DDR1-270ENST00000513043 KIAA0232Q92628 1395 aa24.02■■□□□ 1.44
DDR1-270ENST00000513043 CHRNA2Q15822 529 aa24.01■■□□□ 1.43
DDR1-270ENST00000513043 USP31Q70CQ4 1352 aa24.01■■□□□ 1.43
DDR1-270ENST00000513043 SLIT3O75094 1523 aa24■■□□□ 1.43
DDR1-270ENST00000513043 GGNBP2Q9H3C7 697 aa24■■□□□ 1.43
DDR1-270ENST00000513043 USP21Q9UK80 565 aa23.99■■□□□ 1.43
DDR1-270ENST00000513043 FYB1O15117 783 aa23.98■■□□□ 1.43
DDR1-270ENST00000513043 ZNF772Q68DY9 489 aaPredicted RBP23.98■■□□□ 1.43
DDR1-270ENST00000513043 FNBP4Q8N3X1 1017 aaPredicted RBP23.98■■□□□ 1.43
DDR1-270ENST00000513043 OVOS2A0A0J9YW53 1432 aa23.97■■□□□ 1.43
DDR1-270ENST00000513043 OVOS2Q6IE36 1432 aa23.97■■□□□ 1.43
DDR1-270ENST00000513043 COG3Q96JB2 828 aa23.97■■□□□ 1.43
DDR1-270ENST00000513043 KCNH5Q8NCM2 988 aa23.96■■□□□ 1.43
DDR1-270ENST00000513043 SLIT2O94813 1529 aa23.95■■□□□ 1.43
DDR1-270ENST00000513043 BTG4Q9NY30 223 aa23.95■■□□□ 1.42
DDR1-270ENST00000513043 PLCH1Q4KWH8 1693 aa23.95■■□□□ 1.42
DDR1-270ENST00000513043 BCL9LQ86UU0 1499 aa23.94■■□□□ 1.42
DDR1-270ENST00000513043 KIF20BQ96Q89 1820 aa23.94■■□□□ 1.42
DDR1-270ENST00000513043 COL14A1Q05707 1796 aaKnown RBP23.94■■□□□ 1.42
DDR1-270ENST00000513043 USP54Q70EL1 1684 aa23.94■■□□□ 1.42
DDR1-270ENST00000513043 CPDO75976 1380 aa23.93■■□□□ 1.42
DDR1-270ENST00000513043 CGNL1Q0VF96 1302 aa23.93■■□□□ 1.42
DDR1-270ENST00000513043 QTRT2Q9H974 415 aaKnown RBP23.93■■□□□ 1.42
DDR1-270ENST00000513043 NFAT5O94916 1531 aa23.93■■□□□ 1.42
DDR1-270ENST00000513043 UNC5CLQ8IV45 518 aa23.92■■□□□ 1.42
DDR1-270ENST00000513043 FBLN1P23142 703 aa23.91■■□□□ 1.42
DDR1-270ENST00000513043 KNSTRNQ9Y448 316 aa23.91■■□□□ 1.42
DDR1-270ENST00000513043 ARHGEF25Q86VW2 580 aa23.9■■□□□ 1.42
DDR1-270ENST00000513043 TRPC5Q9UL62 973 aaPredicted RBP23.89■■□□□ 1.41
DDR1-270ENST00000513043 STRN4Q9NRL3 753 aa23.88■■□□□ 1.41
DDR1-270ENST00000513043 NWD2Q9ULI1 1742 aa23.87■■□□□ 1.41
DDR1-270ENST00000513043 CCDC9Q9Y3X0 531 aaKnown RBP23.87■■□□□ 1.41
DDR1-270ENST00000513043 CAMTA1Q9Y6Y1 1673 aa23.86■■□□□ 1.41
DDR1-270ENST00000513043 ATRNO75882 1429 aa23.86■■□□□ 1.41
DDR1-270ENST00000513043 NRAPQ86VF7 1730 aa23.85■■□□□ 1.41
DDR1-270ENST00000513043 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.85■■□□□ 1.41
DDR1-270ENST00000513043 EVA1CP58658 441 aa23.85■■□□□ 1.41
DDR1-270ENST00000513043 CNGB1Q14028 1251 aaPredicted RBP23.85■■□□□ 1.41
DDR1-270ENST00000513043 AATKQ6ZMQ8 1374 aa23.85■■□□□ 1.41
DDR1-270ENST00000513043 LMO7Q8WWI1 1683 aa23.85■■□□□ 1.41
DDR1-270ENST00000513043 PER1O15534 1290 aaPredicted RBP23.84■■□□□ 1.41
DDR1-270ENST00000513043 RXRBP28702 533 aa23.84■■□□□ 1.41
DDR1-270ENST00000513043 TNNT2P45379 298 aaPredicted RBP23.84■■□□□ 1.41
DDR1-270ENST00000513043 RRS1Q15050 365 aaKnown RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms